| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is gmhB1 [H]
Identifier: 86748724
GI number: 86748724
Start: 1802799
End: 1803350
Strand: Reverse
Name: gmhB1 [H]
Synonym: RPB_1599
Alternate gene names: 86748724
Gene position: 1803350-1802799 (Counterclockwise)
Preceding gene: 86748725
Following gene: 86748722
Centisome position: 33.82
GC content: 64.67
Gene sequence:
>552_bases ATGACGGCGAGCGCCACCACGCCGCTGCGTCCCGCCGCGTTTCTCGATCGCGACGGCGTCGTGAACTACAATGATCACTA TATCGGCAGCCGCGACCGGTTTCGCTGGATGCCGGGGATCGCATCGGCGATCCGCCGTCTCAACCAAGCCGGCTACTACG TCTTCGTCATTACTAACCAGTCCGGCGTCGCCCGCGGCCTATTCAGCGAGGACGACGTCCAGGCGCTGCATCGCTGGATG CTGGACGAACTCCGCGAGCAGAACGCGCGGATCGACGACATCCGCTACTGCCCGCATCATCCCGACGGCATCGTCGAGGC GTATCGCCGGGCGAGCGACGACCGCAAGCCGAAGCCCGGCATGATCCTCGATCTCGCGCGCGCCTGGCCGGTGTCGCTGC AGGGCAGTTTCGTGATCGGCGACAGCGACAGCGATATCGAAGCCGCAACGGCGGCGGGTATTCAGGGCTTTCTGTTCGAG GGCGACGATATCGACGCGTTCGTCTCAAAGGTCCTCGACACGATGGCGCGCAGCGACGCAGCGCAGAACTAA
Upstream 100 bases:
>100_bases TGGTGGCGCCGGGCGCCGAAACCGCTCTGGTGCAACAGATCCATCTGGTGGCCGCGCACGCGATCTGCGACGAGATCGAA GGCGCGCTGGCAGCCGGGGC
Downstream 100 bases:
>100_bases TCGAGCAGCCGTTCGGCGGCCTCGATCGCCTGCCGCGCAGAGGGCGCGCCGCTCTTGCCGCCCAATACGCGCATCGGACC GCTGCCGACCGGGCCGGTCA
Product: histidinol-phosphate phosphatase
Products: NA
Alternate protein names: D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase 1 [H]
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MTASATTPLRPAAFLDRDGVVNYNDHYIGSRDRFRWMPGIASAIRRLNQAGYYVFVITNQSGVARGLFSEDDVQALHRWM LDELREQNARIDDIRYCPHHPDGIVEAYRRASDDRKPKPGMILDLARAWPVSLQGSFVIGDSDSDIEAATAAGIQGFLFE GDDIDAFVSKVLDTMARSDAAQN
Sequences:
>Translated_183_residues MTASATTPLRPAAFLDRDGVVNYNDHYIGSRDRFRWMPGIASAIRRLNQAGYYVFVITNQSGVARGLFSEDDVQALHRWM LDELREQNARIDDIRYCPHHPDGIVEAYRRASDDRKPKPGMILDLARAWPVSLQGSFVIGDSDSDIEAATAAGIQGFLFE GDDIDAFVSKVLDTMARSDAAQN >Mature_182_residues TASATTPLRPAAFLDRDGVVNYNDHYIGSRDRFRWMPGIASAIRRLNQAGYYVFVITNQSGVARGLFSEDDVQALHRWML DELREQNARIDDIRYCPHHPDGIVEAYRRASDDRKPKPGMILDLARAWPVSLQGSFVIGDSDSDIEAATAAGIQGFLFEG DDIDAFVSKVLDTMARSDAAQN
Specific function: Converts the D-glycero-beta-D-manno-heptose 1,7- bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1- phosphate by removing the phosphate group at the C-7 position [H]
COG id: COG0241
COG function: function code E; Histidinol phosphatase and related phosphatases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gmhB family [H]
Homologues:
Organism=Escherichia coli, GI1786399, Length=144, Percent_Identity=41.6666666666667, Blast_Score=132, Evalue=1e-32, Organism=Escherichia coli, GI87082027, Length=155, Percent_Identity=28.3870967741935, Blast_Score=75, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006549 - InterPro: IPR004446 - InterPro: IPR006543 - InterPro: IPR013954 [H]
Pfam domain/function: PF08645 PNK3P [H]
EC number: 3.1.1.-
Molecular weight: Translated: 20394; Mature: 20263
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASATTPLRPAAFLDRDGVVNYNDHYIGSRDRFRWMPGIASAIRRLNQAGYYVFVITNQ CCCCCCCCCCCHHHCCCCCEECCCCCCCCCCCCCEECHHHHHHHHHHHHCCEEEEEEECC SGVARGLFSEDDVQALHRWMLDELREQNARIDDIRYCPHHPDGIVEAYRRASDDRKPKPG CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHCCCCCCCCC MILDLARAWPVSLQGSFVIGDSDSDIEAATAAGIQGFLFEGDDIDAFVSKVLDTMARSDA CEEECCCCCCCCCCCCEEECCCCCCCHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCC AQN CCC >Mature Secondary Structure TASATTPLRPAAFLDRDGVVNYNDHYIGSRDRFRWMPGIASAIRRLNQAGYYVFVITNQ CCCCCCCCCCHHHCCCCCEECCCCCCCCCCCCCEECHHHHHHHHHHHHCCEEEEEEECC SGVARGLFSEDDVQALHRWMLDELREQNARIDDIRYCPHHPDGIVEAYRRASDDRKPKPG CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHCCCCCCCCC MILDLARAWPVSLQGSFVIGDSDSDIEAATAAGIQGFLFEGDDIDAFVSKVLDTMARSDA CEEECCCCCCCCCCCCEEECCCCCCCHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCC AQN CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 14528314 [H]