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The map label for this gene is glxA [H]

Identifier: 86748265

GI number: 86748265

Start: 1310770

End: 1311738

Strand: Reverse

Name: glxA [H]

Synonym: RPB_1140

Alternate gene names: 86748265

Gene position: 1311738-1310770 (Counterclockwise)

Preceding gene: 86748271

Following gene: 86748264

Centisome position: 24.6

GC content: 69.66

Gene sequence:

>969_bases
TTGCCAAAGACGTTGCCTGCGCCGGCCTCGCGCCCGTCCCGGGTCGGCTTCCTGCTGATCGACGGCTTCGCGCTGATGTC
GTTCGCTTCTGCCGTCGAGCCGCTGCGCGCCGCCAACGCCATCGCCGGGCGCACGCTGTATCAATGGTTTCACGTCTCGA
TCGACGGCCGTCCGATCGGCGCCTCCAGCGGGCTGTCGATCCAGCCGGACTGCGCGATCGACGGCGCGCAGGAGTTCGAC
ATCGTGCTGGTCTGTGCCGGCGGCAATCCGACCAAATTCTCCGATCGGCGGACGATGAGCTGGCTGCGCGCGCAGGCGCG
GCGCGGCGTGGCGATCGGCGGCATCTCCGGCGGTCCTTATCTTCTCGCCCGCGCCAAGGTGCTCGACGGCTATCGCTGCA
CGATCCATTGGGAGCACGCGCCGGCCTTCGCCGAGGCGTTTCCGCATCTCGACCTGACGCGCAATTTGTTCGAGATCGAC
CGCGAGCGCCTGACCTGCGGCGGCGGCGTCGCCGGGCTCGACATGATGCAGGCGCTGATCCGCCGCGACCACGGCCCGGA
GCTGGCCGCCAAGGTCAGCGACTGGTTTCTGCAGACCAATGTCCGGCTCGGCGATTCCAGCCAGCGGCCGAATGCGCGCG
AGCGCGGGCGGCTCGGTCATCCCGCGCTGCAGGCCGCGATCGAGCTGATGGAGCGCCGGCTGCGCGAGCCGGCGAGCCGG
ACCGAGATCGCCCGCGCCGCCGGCGTCTCGCTGCGCCAGCTCGAGCGATTATTCACGACGCATCTCAAGACGACGATCGA
GCGACGCTACCTGATGATCCGGCTGCAGCGCGCGCGGACTCTGCTGCGGCAGACGTCGCTCCCCGTCACCCAGATCGGCG
CGGATTGCGGCTTCGTCAGCCTCGCGCATTTCTCGCGCGTCTATAGGCAGCGCTTCGCGCGCACGCCCTCGGCCGACCGC
AGGCTCTGA

Upstream 100 bases:

>100_bases
AACAGCGAATAGCGCATGCTTGATCCTTCGGCCTGCACTGTCGCGCATCGGCGAAACCCGCTATAGACTGAAAACGACAT
CCCCTTGCCCAGGAGCGCCA

Downstream 100 bases:

>100_bases
CGAGAGTGGTGCACGGCCCGGGAATATGCGCTTTATGACCACGCACGACACTGTCGAAGGCCGGAAGCAGCAGATGAAGA
AGCCGAAACCAGATCCATCG

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MPKTLPAPASRPSRVGFLLIDGFALMSFASAVEPLRAANAIAGRTLYQWFHVSIDGRPIGASSGLSIQPDCAIDGAQEFD
IVLVCAGGNPTKFSDRRTMSWLRAQARRGVAIGGISGGPYLLARAKVLDGYRCTIHWEHAPAFAEAFPHLDLTRNLFEID
RERLTCGGGVAGLDMMQALIRRDHGPELAAKVSDWFLQTNVRLGDSSQRPNARERGRLGHPALQAAIELMERRLREPASR
TEIARAAGVSLRQLERLFTTHLKTTIERRYLMIRLQRARTLLRQTSLPVTQIGADCGFVSLAHFSRVYRQRFARTPSADR
RL

Sequences:

>Translated_322_residues
MPKTLPAPASRPSRVGFLLIDGFALMSFASAVEPLRAANAIAGRTLYQWFHVSIDGRPIGASSGLSIQPDCAIDGAQEFD
IVLVCAGGNPTKFSDRRTMSWLRAQARRGVAIGGISGGPYLLARAKVLDGYRCTIHWEHAPAFAEAFPHLDLTRNLFEID
RERLTCGGGVAGLDMMQALIRRDHGPELAAKVSDWFLQTNVRLGDSSQRPNARERGRLGHPALQAAIELMERRLREPASR
TEIARAAGVSLRQLERLFTTHLKTTIERRYLMIRLQRARTLLRQTSLPVTQIGADCGFVSLAHFSRVYRQRFARTPSADR
RL
>Mature_321_residues
PKTLPAPASRPSRVGFLLIDGFALMSFASAVEPLRAANAIAGRTLYQWFHVSIDGRPIGASSGLSIQPDCAIDGAQEFDI
VLVCAGGNPTKFSDRRTMSWLRAQARRGVAIGGISGGPYLLARAKVLDGYRCTIHWEHAPAFAEAFPHLDLTRNLFEIDR
ERLTCGGGVAGLDMMQALIRRDHGPELAAKVSDWFLQTNVRLGDSSQRPNARERGRLGHPALQAAIELMERRLREPASRT
EIARAAGVSLRQLERLFTTHLKTTIERRYLMIRLQRARTLLRQTSLPVTQIGADCGFVSLAHFSRVYRQRFARTPSADRR
L

Specific function: Transcriptional Activator Of The Superoxide Response Regulon Of E.Coli That Includes At Least 10 Genes Such As Soda, Nfo, Zwf And Micf. Binds The DNA Sequence 5'-Gcacn(7)Caa-3'. It Also Facilitates The Subsequent Binding Of RNA Polymerase To The Micf And

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 2500 (L-broth) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 35738; Mature: 35606

Theoretical pI: Translated: 11.31; Mature: 11.31

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKTLPAPASRPSRVGFLLIDGFALMSFASAVEPLRAANAIAGRTLYQWFHVSIDGRPIG
CCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHEEHEEEEEECCEECC
ASSGLSIQPDCAIDGAQEFDIVLVCAGGNPTKFSDRRTMSWLRAQARRGVAIGGISGGPY
CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCHH
LLARAKVLDGYRCTIHWEHAPAFAEAFPHLDLTRNLFEIDRERLTCGGGVAGLDMMQALI
HEEHHHHHCCEEEEEEECCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
RRDHGPELAAKVSDWFLQTNVRLGDSSQRPNARERGRLGHPALQAAIELMERRLREPASR
HCCCCCHHHHHHHHHHHHCCCEECCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCHHH
TEIARAAGVSLRQLERLFTTHLKTTIERRYLMIRLQRARTLLRQTSLPVTQIGADCGFVS
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHH
LAHFSRVYRQRFARTPSADRRL
HHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
PKTLPAPASRPSRVGFLLIDGFALMSFASAVEPLRAANAIAGRTLYQWFHVSIDGRPIG
CCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHEEHEEEEEECCEECC
ASSGLSIQPDCAIDGAQEFDIVLVCAGGNPTKFSDRRTMSWLRAQARRGVAIGGISGGPY
CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCHH
LLARAKVLDGYRCTIHWEHAPAFAEAFPHLDLTRNLFEIDRERLTCGGGVAGLDMMQALI
HEEHHHHHCCEEEEEEECCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
RRDHGPELAAKVSDWFLQTNVRLGDSSQRPNARERGRLGHPALQAAIELMERRLREPASR
HCCCCCHHHHHHHHHHHHCCCEECCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCHHH
TEIARAAGVSLRQLERLFTTHLKTTIERRYLMIRLQRARTLLRQTSLPVTQIGADCGFVS
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHH
LAHFSRVYRQRFARTPSADRRL
HHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]