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The map label for this gene is ypfJ [H]

Identifier: 86748199

GI number: 86748199

Start: 1234024

End: 1234935

Strand: Direct

Name: ypfJ [H]

Synonym: RPB_1074

Alternate gene names: 86748199

Gene position: 1234024-1234935 (Clockwise)

Preceding gene: 86748197

Following gene: 86748200

Centisome position: 23.15

GC content: 66.67

Gene sequence:

>912_bases
ATGCGTGACGATGATTTCCGTCGCAGCGACAATATCGACGACCGACGCGACAGCGGTGGTGGCGGCGGCGGCGGATTTCC
GATGGGCGGCGGCGGATTGGGGATCGGCGCGATCGTCGTGCTCGGCCTGATCGGCTGGGCCACGGGCATCGATCCGCGGC
TGCTGATCAGCGGCGCCGAGATGCTCACCGGCGGCGCGCCGACCCAGCAGAGCGAGCGGTCCTCGCCCGGCAAGCAGGGC
GCGCCGACCGACGACATGGGCAAGATGATCTCCGGCGTGCTCGGCGAGATCGATGATCGCTGGACCGAAATCTTCAAGGC
CAATGGCCAGACCTATGTCGGGCCGAAGATCGTGCTGTTCCGCAATTCCACCAATGGCGGTCGCTGCGGCATGGCGCAAT
CGGCGATGGGGCCGTTCTATTGTCCGCCGGACAAGCAGATCTTCATCGACACCAATTTCTTCAAGCAGGTCGAAACCCGC
TTCAAGGGCTGCTCCGGCAGCGCCTGCCGGTTCACGGCGGCCTACATCATCGCCCACGAGGCCGGTCACCACGTCCAGAA
CCTGCTCGGTATCCTGCCGCGCGTGACGCGCCTGCAGCAGCAGGCGGGCTCGCGCGCCGAATCCAACGCGCTGCAGGTGC
GCGTCGAATTGCAGGCCGATTGCCTGTCCGGCGTCTGGGTCAACCGGGAGGAGAAGAAGCGGCCGAACTTCCTGGAGCCC
GGCGATATCGACGCGGCGTTGACCACGGCGAGCGCGATCGGCGACGACACGCTGCAGCGCAACGCCGGCCGGGACGTGGT
GCCGGATTCCTTCACCCACGGCTCGGCCGCGCAGCGCAAGCGCTGGTTCATGACCGGCTATCAGCAGGGCACGATCCAGT
CGTGCAACACCTTCGCGGCGGAGAGGCTGTAA

Upstream 100 bases:

>100_bases
TAGGCAATATTTGCCGGGCAGGTTATTTCTAATTGTCGCGAATGCGTTCGTGCCGACCGCATCGTGCGGCCGGCGGACGC
CGTGAACCGGGGTAAAGCTG

Downstream 100 bases:

>100_bases
GAGAGGCTGAGACGCGCACAGCGTCATCCTGAGGTGTGCGCCCGACGGGCGCGCCTCGAAGGATGGAAAACGCGCACAGC
ATTCATCCTTCGAGGCTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MRDDDFRRSDNIDDRRDSGGGGGGGFPMGGGGLGIGAIVVLGLIGWATGIDPRLLISGAEMLTGGAPTQQSERSSPGKQG
APTDDMGKMISGVLGEIDDRWTEIFKANGQTYVGPKIVLFRNSTNGGRCGMAQSAMGPFYCPPDKQIFIDTNFFKQVETR
FKGCSGSACRFTAAYIIAHEAGHHVQNLLGILPRVTRLQQQAGSRAESNALQVRVELQADCLSGVWVNREEKKRPNFLEP
GDIDAALTTASAIGDDTLQRNAGRDVVPDSFTHGSAAQRKRWFMTGYQQGTIQSCNTFAAERL

Sequences:

>Translated_303_residues
MRDDDFRRSDNIDDRRDSGGGGGGGFPMGGGGLGIGAIVVLGLIGWATGIDPRLLISGAEMLTGGAPTQQSERSSPGKQG
APTDDMGKMISGVLGEIDDRWTEIFKANGQTYVGPKIVLFRNSTNGGRCGMAQSAMGPFYCPPDKQIFIDTNFFKQVETR
FKGCSGSACRFTAAYIIAHEAGHHVQNLLGILPRVTRLQQQAGSRAESNALQVRVELQADCLSGVWVNREEKKRPNFLEP
GDIDAALTTASAIGDDTLQRNAGRDVVPDSFTHGSAAQRKRWFMTGYQQGTIQSCNTFAAERL
>Mature_303_residues
MRDDDFRRSDNIDDRRDSGGGGGGGFPMGGGGLGIGAIVVLGLIGWATGIDPRLLISGAEMLTGGAPTQQSERSSPGKQG
APTDDMGKMISGVLGEIDDRWTEIFKANGQTYVGPKIVLFRNSTNGGRCGMAQSAMGPFYCPPDKQIFIDTNFFKQVETR
FKGCSGSACRFTAAYIIAHEAGHHVQNLLGILPRVTRLQQQAGSRAESNALQVRVELQADCLSGVWVNREEKKRPNFLEP
GDIDAALTTASAIGDDTLQRNAGRDVVPDSFTHGSAAQRKRWFMTGYQQGTIQSCNTFAAERL

Specific function: Unknown

COG id: COG2321

COG function: function code R; Predicted metalloprotease

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788819, Length=304, Percent_Identity=43.0921052631579, Blast_Score=217, Evalue=6e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007343 [H]

Pfam domain/function: PF04228 Zn_peptidase [H]

EC number: NA

Molecular weight: Translated: 32564; Mature: 32564

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDDDFRRSDNIDDRRDSGGGGGGGFPMGGGGLGIGAIVVLGLIGWATGIDPRLLISGAE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECHH
MLTGGAPTQQSERSSPGKQGAPTDDMGKMISGVLGEIDDRWTEIFKANGQTYVGPKIVLF
HHCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEEEE
RNSTNGGRCGMAQSAMGPFYCPPDKQIFIDTNFFKQVETRFKGCSGSACRFTAAYIIAHE
ECCCCCCCCCCHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
AGHHVQNLLGILPRVTRLQQQAGSRAESNALQVRVELQADCLSGVWVNREEKKRPNFLEP
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECHHHCCCCCCCHHHCCCCCCCC
GDIDAALTTASAIGDDTLQRNAGRDVVPDSFTHGSAAQRKRWFMTGYQQGTIQSCNTFAA
CCCHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHH
ERL
HCC
>Mature Secondary Structure
MRDDDFRRSDNIDDRRDSGGGGGGGFPMGGGGLGIGAIVVLGLIGWATGIDPRLLISGAE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECHH
MLTGGAPTQQSERSSPGKQGAPTDDMGKMISGVLGEIDDRWTEIFKANGQTYVGPKIVLF
HHCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEEEE
RNSTNGGRCGMAQSAMGPFYCPPDKQIFIDTNFFKQVETRFKGCSGSACRFTAAYIIAHE
ECCCCCCCCCCHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
AGHHVQNLLGILPRVTRLQQQAGSRAESNALQVRVELQADCLSGVWVNREEKKRPNFLEP
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECHHHCCCCCCCHHHCCCCCCCC
GDIDAALTTASAIGDDTLQRNAGRDVVPDSFTHGSAAQRKRWFMTGYQQGTIQSCNTFAA
CCCHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHH
ERL
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]