| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is cysW [H]
Identifier: 86748172
GI number: 86748172
Start: 1203970
End: 1204890
Strand: Direct
Name: cysW [H]
Synonym: RPB_1047
Alternate gene names: 86748172
Gene position: 1203970-1204890 (Clockwise)
Preceding gene: 86748171
Following gene: 86748173
Centisome position: 22.58
GC content: 66.45
Gene sequence:
>921_bases ATGACGCTGGTCGCGACCACATCCGTGAGGCGCTCCCCGCGCAAGCCTGCCGTCGCGGCCGGCGCACGTGCCGGGCAGCC GGCGCGGCGCCCGGCGCATGGCGAGCCGGCCTGGGTGCGCCTGCTGATCATCGGCTTCGCCGTGAGTTTTCTCACCGTCT TCGTGGTGCTGCCGCTGATCCTGGTGTTCTCGGAGGCGCTGTCGAAGGGCGTCTCGTTCTATCTCGACGCGCTGGCGGGA GACGAAGCGCTGGCGGCGATCCGGCTGACGCTGGTCGCGGCGGCGATCTCGGTCGGGCTCAATCTGGTGTTCGGCGTGAT CGCCGCCTGGGCGATCGCGAAGTTCGAGTTTCGCGGCAAGACGCTGCTGATCACGCTGATCGATCTGCCGTTCTCGGTCA GCCCGGTGATCTCCGGCCTGGTATTCGTGCTGCTGTTCGGCGCGCAGGGCTTTGTCGGCCCGTGGCTGATGGCCCACGAC GTGCGAATCCTGTTCGCGCTGCCGGCGATCGTGCTGGCGACCACCTTCGTGACCTTCCCGTTCGTCGCGCGCGAACTGAT CCCGCTGATGCAGGAGCAGGGCCAGCACGAGGAAGAAGCCGCGATCTCGCTCGGCGCCAGCGGCTGGAAAACCTTCTGGC GGGTGACGCTGCCGAACATCAAATGGGGCCTGCTGTACGGCGTGCTGCTGTGCAATGCGCGGGCGATGGGCGAGTTCGGC GCGGTGTCGGTGGTGTCGGGTCACATCCGCGGCGAGACCAACACCATGCCGCTGCTGGTCGAAATTCTCTACAACGAGTA TCAGATGGTCGCCGCCTTCGCGATCGCCTCGCTGCTGGCGCTGCTGGCGCTGGTGACGCTGATCGTCAAGACCATCTTGG AAGGCCGTATCGAGGAAGGGCTGCACACCGATGACCATTGA
Upstream 100 bases:
>100_bases ATCGCGGTGGTGATGCTGCTCTTCTCCTTCCTGATCATTCTCGTTCTGAACCGGCTGCAGCATTGGGCGCAGACCCGGTC GCTGGCGGGAGCGTGAGGCG
Downstream 100 bases:
>100_bases AGTCCGCAACATCGTCAAGCAATTCGGCAGTTTCCGCGCGCTCGACAATGTCGACCTGCGGGTCGAGACCGGCGAGCTGA TGGCGCTGCTCGGCCCCTCC
Product: sulfate ABC transporter, permease protein CysW
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MTLVATTSVRRSPRKPAVAAGARAGQPARRPAHGEPAWVRLLIIGFAVSFLTVFVVLPLILVFSEALSKGVSFYLDALAG DEALAAIRLTLVAAAISVGLNLVFGVIAAWAIAKFEFRGKTLLITLIDLPFSVSPVISGLVFVLLFGAQGFVGPWLMAHD VRILFALPAIVLATTFVTFPFVARELIPLMQEQGQHEEEAAISLGASGWKTFWRVTLPNIKWGLLYGVLLCNARAMGEFG AVSVVSGHIRGETNTMPLLVEILYNEYQMVAAFAIASLLALLALVTLIVKTILEGRIEEGLHTDDH
Sequences:
>Translated_306_residues MTLVATTSVRRSPRKPAVAAGARAGQPARRPAHGEPAWVRLLIIGFAVSFLTVFVVLPLILVFSEALSKGVSFYLDALAG DEALAAIRLTLVAAAISVGLNLVFGVIAAWAIAKFEFRGKTLLITLIDLPFSVSPVISGLVFVLLFGAQGFVGPWLMAHD VRILFALPAIVLATTFVTFPFVARELIPLMQEQGQHEEEAAISLGASGWKTFWRVTLPNIKWGLLYGVLLCNARAMGEFG AVSVVSGHIRGETNTMPLLVEILYNEYQMVAAFAIASLLALLALVTLIVKTILEGRIEEGLHTDDH >Mature_305_residues TLVATTSVRRSPRKPAVAAGARAGQPARRPAHGEPAWVRLLIIGFAVSFLTVFVVLPLILVFSEALSKGVSFYLDALAGD EALAAIRLTLVAAAISVGLNLVFGVIAAWAIAKFEFRGKTLLITLIDLPFSVSPVISGLVFVLLFGAQGFVGPWLMAHDV RILFALPAIVLATTFVTFPFVARELIPLMQEQGQHEEEAAISLGASGWKTFWRVTLPNIKWGLLYGVLLCNARAMGEFGA VSVVSGHIRGETNTMPLLVEILYNEYQMVAAFAIASLLALLALVTLIVKTILEGRIEEGLHTDDH
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4208
COG function: function code P; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI87082099, Length=262, Percent_Identity=51.5267175572519, Blast_Score=275, Evalue=4e-75, Organism=Escherichia coli, GI1788764, Length=223, Percent_Identity=35.8744394618834, Blast_Score=150, Evalue=1e-37, Organism=Escherichia coli, GI1786980, Length=178, Percent_Identity=33.1460674157303, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1787369, Length=178, Percent_Identity=28.0898876404494, Blast_Score=62, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011866 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 32942; Mature: 32811
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLVATTSVRRSPRKPAVAAGARAGQPARRPAHGEPAWVRLLIIGFAVSFLTVFVVLPLI CEEEEECHHHCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LVFSEALSKGVSFYLDALAGDEALAAIRLTLVAAAISVGLNLVFGVIAAWAIAKFEFRGK HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC TLLITLIDLPFSVSPVISGLVFVLLFGAQGFVGPWLMAHDVRILFALPAIVLATTFVTFP EEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FVARELIPLMQEQGQHEEEAAISLGASGWKTFWRVTLPNIKWGLLYGVLLCNARAMGEFG HHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHEEEEECCCCHHHHHHHHHHHCCHHCCCCC AVSVVSGHIRGETNTMPLLVEILYNEYQMVAAFAIASLLALLALVTLIVKTILEGRIEEG CHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LHTDDH CCCCCC >Mature Secondary Structure TLVATTSVRRSPRKPAVAAGARAGQPARRPAHGEPAWVRLLIIGFAVSFLTVFVVLPLI EEEEECHHHCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LVFSEALSKGVSFYLDALAGDEALAAIRLTLVAAAISVGLNLVFGVIAAWAIAKFEFRGK HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC TLLITLIDLPFSVSPVISGLVFVLLFGAQGFVGPWLMAHDVRILFALPAIVLATTFVTFP EEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FVARELIPLMQEQGQHEEEAAISLGASGWKTFWRVTLPNIKWGLLYGVLLCNARAMGEFG HHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHEEEEECCCCHHHHHHHHHHHCCHHCCCCC AVSVVSGHIRGETNTMPLLVEILYNEYQMVAAFAIASLLALLALVTLIVKTILEGRIEEG CHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LHTDDH CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]