| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is cysU [H]
Identifier: 86748171
GI number: 86748171
Start: 1203039
End: 1203965
Strand: Direct
Name: cysU [H]
Synonym: RPB_1046
Alternate gene names: 86748171
Gene position: 1203039-1203965 (Clockwise)
Preceding gene: 86748170
Following gene: 86748172
Centisome position: 22.56
GC content: 67.53
Gene sequence:
>927_bases ATGCGCGTCGACCTCTCCCCGCAGGCGGGGAGAGGTGAGGTTGCGCTCGGCGAACGCTGTCGTTCGTCCGGCGCGCCGTC GTGTGCTGCAGTGAGCGCGATCGCACGACGACGGTCGTTGCCGGGCTTCGGCCTCACCATGGGCCTGACCCTGATGTGGC TGTCGCTGATGATCCTGATTCCGCTGGCCGGGCTGTTCGTGAAGACGGCCGAACTCAGCCTCTCCGAATTCTGGGCGACG GTGACCGCGCCGCGCACGCTGCATGCCTTGAAGATCTCGTTCGGGCTGGCCTTCGCCGCCGCCTGCGTCAATCTGGTCGC CGGCCTGCTGATCGTCTGGGCGCTGGTGCGTTACAGCTTCCCCGGCCGGCGGATCTTCGACGCCATCGTCGACATCCCGT TCGCGCTGCCGACCGCGGTCGCCGGCATCGCGCTGACGACGCTGTTCGCGCAGAACGGCTGGCTCGGCGCGCCGCTCGCC GAACTCGGCATCAAGGTGGCGTTCACGCCGCTCGGGATTTTTCTGGCGATGGTGTTCATCGGGATTCCGTTCGTGGTGCG CACCGTGCAGCCGGTGCTGATCGATCTCGACGCCGAACTCGAGGAGGCCGCGGAATCGCTCGGGGCGTCGCGGCTACAGA CCATCCGCCGCGTCATCCTGCCGTCGCTGACGCCGGCGGTGATGACCGGCTTCGCGCTCGCCTTCGCCCGCGCGGTCGGC GAATACGGTTCGGTGATCTTCATCGCCGGCAACCTGCCCAACGTCTCGGAGATCGCGCCGCTGCTGATCGTGATCCGGCT GGCGGAGTTCCGCTATGCCGACGCCACCGCGATCGCGGTGGTGATGCTGCTCTTCTCCTTCCTGATCATTCTCGTTCTGA ACCGGCTGCAGCATTGGGCGCAGACCCGGTCGCTGGCGGGAGCGTGA
Upstream 100 bases:
>100_bases TCCCCGCCCGCGGGGAGAGGGCCCGGGTGAGGGGGCGTTTCCACGAGTCTGAGCCGCTCGGCCGTGTGGAGACGCCCCCT CACCCGCCGCGCATCTGGCG
Downstream 100 bases:
>100_bases GGCGATGACGCTGGTCGCGACCACATCCGTGAGGCGCTCCCCGCGCAAGCCTGCCGTCGCGGCCGGCGCACGTGCCGGGC AGCCGGCGCGGCGCCCGGCG
Product: sulfate ABC transporter, permease protein CysT
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MRVDLSPQAGRGEVALGERCRSSGAPSCAAVSAIARRRSLPGFGLTMGLTLMWLSLMILIPLAGLFVKTAELSLSEFWAT VTAPRTLHALKISFGLAFAAACVNLVAGLLIVWALVRYSFPGRRIFDAIVDIPFALPTAVAGIALTTLFAQNGWLGAPLA ELGIKVAFTPLGIFLAMVFIGIPFVVRTVQPVLIDLDAELEEAAESLGASRLQTIRRVILPSLTPAVMTGFALAFARAVG EYGSVIFIAGNLPNVSEIAPLLIVIRLAEFRYADATAIAVVMLLFSFLIILVLNRLQHWAQTRSLAGA
Sequences:
>Translated_308_residues MRVDLSPQAGRGEVALGERCRSSGAPSCAAVSAIARRRSLPGFGLTMGLTLMWLSLMILIPLAGLFVKTAELSLSEFWAT VTAPRTLHALKISFGLAFAAACVNLVAGLLIVWALVRYSFPGRRIFDAIVDIPFALPTAVAGIALTTLFAQNGWLGAPLA ELGIKVAFTPLGIFLAMVFIGIPFVVRTVQPVLIDLDAELEEAAESLGASRLQTIRRVILPSLTPAVMTGFALAFARAVG EYGSVIFIAGNLPNVSEIAPLLIVIRLAEFRYADATAIAVVMLLFSFLIILVLNRLQHWAQTRSLAGA >Mature_308_residues MRVDLSPQAGRGEVALGERCRSSGAPSCAAVSAIARRRSLPGFGLTMGLTLMWLSLMILIPLAGLFVKTAELSLSEFWAT VTAPRTLHALKISFGLAFAAACVNLVAGLLIVWALVRYSFPGRRIFDAIVDIPFALPTAVAGIALTTLFAQNGWLGAPLA ELGIKVAFTPLGIFLAMVFIGIPFVVRTVQPVLIDLDAELEEAAESLGASRLQTIRRVILPSLTPAVMTGFALAFARAVG EYGSVIFIAGNLPNVSEIAPLLIVIRLAEFRYADATAIAVVMLLFSFLIILVLNRLQHWAQTRSLAGA
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0555
COG function: function code O; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788764, Length=265, Percent_Identity=50.188679245283, Blast_Score=239, Evalue=2e-64, Organism=Escherichia coli, GI87082099, Length=274, Percent_Identity=31.7518248175182, Blast_Score=139, Evalue=2e-34, Organism=Escherichia coli, GI1786980, Length=174, Percent_Identity=33.3333333333333, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1787369, Length=234, Percent_Identity=26.4957264957265, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1786254, Length=214, Percent_Identity=25.2336448598131, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1787368, Length=221, Percent_Identity=30.316742081448, Blast_Score=67, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011865 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 32829; Mature: 32829
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVDLSPQAGRGEVALGERCRSSGAPSCAAVSAIARRRSLPGFGLTMGLTLMWLSLMILI CCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH PLAGLFVKTAELSLSEFWATVTAPRTLHALKISFGLAFAAACVNLVAGLLIVWALVRYSF HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PGRRIFDAIVDIPFALPTAVAGIALTTLFAQNGWLGAPLAELGIKVAFTPLGIFLAMVFI CCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHHHHHHHH GIPFVVRTVQPVLIDLDAELEEAAESLGASRLQTIRRVILPSLTPAVMTGFALAFARAVG HHHHHHHHHHHHHEECCHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH EYGSVIFIAGNLPNVSEIAPLLIVIRLAEFRYADATAIAVVMLLFSFLIILVLNRLQHWA CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QTRSLAGA HHHHCCCC >Mature Secondary Structure MRVDLSPQAGRGEVALGERCRSSGAPSCAAVSAIARRRSLPGFGLTMGLTLMWLSLMILI CCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH PLAGLFVKTAELSLSEFWATVTAPRTLHALKISFGLAFAAACVNLVAGLLIVWALVRYSF HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PGRRIFDAIVDIPFALPTAVAGIALTTLFAQNGWLGAPLAELGIKVAFTPLGIFLAMVFI CCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHHHHHHHH GIPFVVRTVQPVLIDLDAELEEAAESLGASRLQTIRRVILPSLTPAVMTGFALAFARAVG HHHHHHHHHHHHHEECCHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH EYGSVIFIAGNLPNVSEIAPLLIVIRLAEFRYADATAIAVVMLLFSFLIILVLNRLQHWA CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QTRSLAGA HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2188958; 9205837; 9278503; 2188959 [H]