| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is cysD [H]
Identifier: 86748168
GI number: 86748168
Start: 1199864
End: 1200739
Strand: Reverse
Name: cysD [H]
Synonym: RPB_1043
Alternate gene names: 86748168
Gene position: 1200739-1199864 (Counterclockwise)
Preceding gene: 86748174
Following gene: 86748167
Centisome position: 22.52
GC content: 66.1
Gene sequence:
>876_bases ATGACCCTCGCCGCCCGCGACCCCCTCGCCGCCAAGCCGGTGTCGTTCGCCGATCTCGACCCGCGCGAACAGCTCCGCCC GATGGATCATCTCGACGCGCTGGAAGCGCAGAGCATCTACATATTCCGTGAAGGTTTTGCGCGGCTGAAGAAGCTGGCAC TGCTGTGGTCGCTCGGCAAAGATTCCAACGTGATGATCTGGCTGGCGCGCAAGGCGTTCTTCGGCAAGGTGCCGTTCCCG GCGCTGCACGTCGACACCGGCAAGAAGTTTCCTGAGATGTACGCCTTCCGCGAACACTACGCGAAGGAGTGGGATCTCGA TTTGCGCGTCGATCCCTGCCCGCCGATCGACAGCGTCGATCCGACCCTGCCGCCGGCGGCGCGCTCGGCGGCGCGCAAGA CCGAAGGCTTGAAGCTGGCGCTGGCCAAATACGGCTTCGACGGACTGATCGCCGGCATCCGCCGCGACGAGGAGGCGACC CGCGCCAAAGAACGCGTGTTCTCGCCGCGCGGCACCGAGGGCGGCTGGGACGTGCGCGATCAGCCGCCGGAATTCTGGGA CCAGTTCAACGCCTCGCCGCCGCCCGGCGCTCACTTGCGTATTCACCCCATCCTGCATTGGACCGAGGCCGACATCTGGG CCTACACCAAGCGCGAGAACATCCCGATCATCCCGCTGTATCTGGCCAAGGACGGCAAGCGCTATCGCTCGCTCGGCGAC CAGGACATCACCTTCCCGGTGGCGTCGCACGCCTCGTCGATCGACGAGATCCTGCACGAATTGCAGACCACCAAGGTGCC GGAGCGCGCCGGCCGCGCGCTCGACCACGAGACCGAGGACGCGTTCGAGCGGCTTCGCGTCGCCGGTTATCTGTGA
Upstream 100 bases:
>100_bases CGACAGAGATGTTCGTTCTCCTGACGACCCCAGCGACGTCGCGCGGCGCCACCACGACGGGTCCGCGGCGATGCGGATCA GCCAATTCCGGGAGCTGTGA
Downstream 100 bases:
>100_bases GCTGTGACTTCGCACCAAGTGATGTCCGACAATGAGTGACGCCATGACCATCGCCGTCCCGCCCGCCACGCTCTCCACGC CGAACGGCACCACGCGCCCC
Product: sulfate adenylyltransferase subunit 2
Products: NA
Alternate protein names: ATP-sulfurylase small subunit; Sulfate adenylate transferase; SAT [H]
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MTLAARDPLAAKPVSFADLDPREQLRPMDHLDALEAQSIYIFREGFARLKKLALLWSLGKDSNVMIWLARKAFFGKVPFP ALHVDTGKKFPEMYAFREHYAKEWDLDLRVDPCPPIDSVDPTLPPAARSAARKTEGLKLALAKYGFDGLIAGIRRDEEAT RAKERVFSPRGTEGGWDVRDQPPEFWDQFNASPPPGAHLRIHPILHWTEADIWAYTKRENIPIIPLYLAKDGKRYRSLGD QDITFPVASHASSIDEILHELQTTKVPERAGRALDHETEDAFERLRVAGYL
Sequences:
>Translated_291_residues MTLAARDPLAAKPVSFADLDPREQLRPMDHLDALEAQSIYIFREGFARLKKLALLWSLGKDSNVMIWLARKAFFGKVPFP ALHVDTGKKFPEMYAFREHYAKEWDLDLRVDPCPPIDSVDPTLPPAARSAARKTEGLKLALAKYGFDGLIAGIRRDEEAT RAKERVFSPRGTEGGWDVRDQPPEFWDQFNASPPPGAHLRIHPILHWTEADIWAYTKRENIPIIPLYLAKDGKRYRSLGD QDITFPVASHASSIDEILHELQTTKVPERAGRALDHETEDAFERLRVAGYL >Mature_290_residues TLAARDPLAAKPVSFADLDPREQLRPMDHLDALEAQSIYIFREGFARLKKLALLWSLGKDSNVMIWLARKAFFGKVPFPA LHVDTGKKFPEMYAFREHYAKEWDLDLRVDPCPPIDSVDPTLPPAARSAARKTEGLKLALAKYGFDGLIAGIRRDEEATR AKERVFSPRGTEGGWDVRDQPPEFWDQFNASPPPGAHLRIHPILHWTEADIWAYTKRENIPIIPLYLAKDGKRYRSLGDQ DITFPVASHASSIDEILHELQTTKVPERAGRALDHETEDAFERLRVAGYL
Specific function: First step in the sulfate activation pathway. This reaction occurs early in the reductive branch of the cysteine biosynthetic pathway. [C]
COG id: COG0175
COG function: function code EH; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PAPS reductase family. CysD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789109, Length=304, Percent_Identity=41.1184210526316, Blast_Score=211, Evalue=6e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002500 - InterPro: IPR014729 - InterPro: IPR011784 [H]
Pfam domain/function: PF01507 PAPS_reduct [H]
EC number: =2.7.7.4 [H]
Molecular weight: Translated: 33034; Mature: 32903
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLAARDPLAAKPVSFADLDPREQLRPMDHLDALEAQSIYIFREGFARLKKLALLWSLGK CCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHCEEEEHHHHHHHHHHHHHHHHCCC DSNVMIWLARKAFFGKVPFPALHVDTGKKFPEMYAFREHYAKEWDLDLRVDPCPPIDSVD CCCEEEEEECHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCC PTLPPAARSAARKTEGLKLALAKYGFDGLIAGIRRDEEATRAKERVFSPRGTEGGWDVRD CCCCHHHHHHHHHHCCCEEEHHHHCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCC QPPEFWDQFNASPPPGAHLRIHPILHWTEADIWAYTKRENIPIIPLYLAKDGKRYRSLGD CCHHHHHHCCCCCCCCCEEEEEEEEEEECCCEEEEECCCCCCEEEEEECCCCHHHHHCCC QDITFPVASHASSIDEILHELQTTKVPERAGRALDHETEDAFERLRVAGYL CCCEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHCCC >Mature Secondary Structure TLAARDPLAAKPVSFADLDPREQLRPMDHLDALEAQSIYIFREGFARLKKLALLWSLGK CCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHCEEEEHHHHHHHHHHHHHHHHCCC DSNVMIWLARKAFFGKVPFPALHVDTGKKFPEMYAFREHYAKEWDLDLRVDPCPPIDSVD CCCEEEEEECHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCC PTLPPAARSAARKTEGLKLALAKYGFDGLIAGIRRDEEATRAKERVFSPRGTEGGWDVRD CCCCHHHHHHHHHHCCCEEEHHHHCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCC QPPEFWDQFNASPPPGAHLRIHPILHWTEADIWAYTKRENIPIIPLYLAKDGKRYRSLGD CCHHHHHHCCCCCCCCCEEEEEEEEEEECCCEEEEECCCCCCEEEEEECCCCHHHHHCCC QDITFPVASHASSIDEILHELQTTKVPERAGRALDHETEDAFERLRVAGYL CCCEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA