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The map label for this gene is 86748145

Identifier: 86748145

GI number: 86748145

Start: 1169376

End: 1170683

Strand: Direct

Name: 86748145

Synonym: RPB_1020

Alternate gene names: NA

Gene position: 1169376-1170683 (Clockwise)

Preceding gene: 86748144

Following gene: 86748147

Centisome position: 21.93

GC content: 70.26

Gene sequence:

>1308_bases
GTGAACGCACGTCTCCGCAAACTCTACGACGATCTGTCCGACACGTTCTGGCTGGTTCCGGCGCTGCTGGTGCTGCTCGG
CACGGTCGCGGCGTTCGGCATGATCGAGATCGATCGCAGCGGCACGGTGCCGGCCTGGCTGCTGGAGAACTGGCTCTACA
ACGGCGGCGCCACCGGCGCCCGCACGCTGCTCGGCGCGGTGGCGTCGTCGACCATCGGCGTCGCCGGCACGGTGTTCTCG
ATCACCATCGCGGCGCTGTCGCTGGCCGCGGGGCAGATGGGGCCGCGGCTGCTGCGCAACTTCACCCGCGACCGCGGCAA
CCAGATCACGCTCGGCATCTTCCTCGGCACGTTCTGCTACGCGCTGATCGTGCTGCGCAGCGTCCGCACCGCCGACGAGG
GCGCCTTCGTGCCGCATCTCGCGCTCGGCGTCGGCATCGCGCTGGGCTTCATCTGCGTCGCCACGCTGGTGTATTTCGTC
GATCACATGGCGAGCCGGATCAATGTCGACACCGTGATCGGGCTGGTCAGCGACGACGTCCGCCGCGTGATGCGCGGACT
GACCGACGACGCCCCGCAGCCGGAGCCGCCGCCGCCGGCGCATTGGCGCGACGCCGAGCCGATCCGCGACGCGCGCGCCG
GCTATCTGCATCATCTCGACGAGAACGGGTTGGCGAGTTGGGCGTGCGAGCACGAGACGGAAATCCGGCTGCTGGTCCGC
CCCGGCGACTACGTCTTTCCCGGCGCGCCGATCGCGCTGATCAAGCCGCCGCGCGACGGCGCGGAAGAGGCCGTCCGCGA
CGCGACGGCGCTCAGCCCGACGCTGACCTCGTCGGACGATCTGCGCTTCGCGATCCGGCAATTGGTCGAGGTCGCGGTGC
GGGCGCTGTCGCCGGGCATCAACGACCCGCACACCGCGCTCAGCGTGCTCAACCGGCTCGGCGCCGCGCTGTGCGACATG
CAGCCGGTGCGCATGAAGAGCGGCGTCGTGGTCAAACAGGGCCGCCTCGCGCTGGTGGTGCCGCATCTGCAATACGACGA
GCTGGTCGACGCGATGTTGCACATGATCCGGCAGAACGCCGCCGGCAAGCCCGCGGTGCTGATCGGAATGCTCGAGGTGC
TGACGCAGGTGGCGAGCGTCGAGCGCGATCCGCCGCGGCTCTCCAGCGTGCGTCGGCACGCCGACCTGGTGATGGGTGAC
GCCGAGCGCGACGTCCGCGGGCCGGACGATCTGGCCGACGTGCGCGCGCGGTATTGGGCGTTCGTCGACATGGCCGAACA
CGGCCCGCTCGGCCCGTTCAAGCTGTAG

Upstream 100 bases:

>100_bases
GGTTGGTTCCGAAATCGATGTCGCGGCCTGGCTGCTGGTGGGCCGGTCGGCACTCTCTGATCGACGCGACCGAGATCCAG
CCGACCCGACGGAATTCGCC

Downstream 100 bases:

>100_bases
CGCCGCGGTCCGCTCAGCCCTCGGCGAGATCGAGAATGCGCTGGCGGCGGCGGCTGGTGGCGGCGTCGATCAGCATCCGG
CCGGCCCAGCGATACACGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 435; Mature: 435

Protein sequence:

>435_residues
MNARLRKLYDDLSDTFWLVPALLVLLGTVAAFGMIEIDRSGTVPAWLLENWLYNGGATGARTLLGAVASSTIGVAGTVFS
ITIAALSLAAGQMGPRLLRNFTRDRGNQITLGIFLGTFCYALIVLRSVRTADEGAFVPHLALGVGIALGFICVATLVYFV
DHMASRINVDTVIGLVSDDVRRVMRGLTDDAPQPEPPPPAHWRDAEPIRDARAGYLHHLDENGLASWACEHETEIRLLVR
PGDYVFPGAPIALIKPPRDGAEEAVRDATALSPTLTSSDDLRFAIRQLVEVAVRALSPGINDPHTALSVLNRLGAALCDM
QPVRMKSGVVVKQGRLALVVPHLQYDELVDAMLHMIRQNAAGKPAVLIGMLEVLTQVASVERDPPRLSSVRRHADLVMGD
AERDVRGPDDLADVRARYWAFVDMAEHGPLGPFKL

Sequences:

>Translated_435_residues
MNARLRKLYDDLSDTFWLVPALLVLLGTVAAFGMIEIDRSGTVPAWLLENWLYNGGATGARTLLGAVASSTIGVAGTVFS
ITIAALSLAAGQMGPRLLRNFTRDRGNQITLGIFLGTFCYALIVLRSVRTADEGAFVPHLALGVGIALGFICVATLVYFV
DHMASRINVDTVIGLVSDDVRRVMRGLTDDAPQPEPPPPAHWRDAEPIRDARAGYLHHLDENGLASWACEHETEIRLLVR
PGDYVFPGAPIALIKPPRDGAEEAVRDATALSPTLTSSDDLRFAIRQLVEVAVRALSPGINDPHTALSVLNRLGAALCDM
QPVRMKSGVVVKQGRLALVVPHLQYDELVDAMLHMIRQNAAGKPAVLIGMLEVLTQVASVERDPPRLSSVRRHADLVMGD
AERDVRGPDDLADVRARYWAFVDMAEHGPLGPFKL
>Mature_435_residues
MNARLRKLYDDLSDTFWLVPALLVLLGTVAAFGMIEIDRSGTVPAWLLENWLYNGGATGARTLLGAVASSTIGVAGTVFS
ITIAALSLAAGQMGPRLLRNFTRDRGNQITLGIFLGTFCYALIVLRSVRTADEGAFVPHLALGVGIALGFICVATLVYFV
DHMASRINVDTVIGLVSDDVRRVMRGLTDDAPQPEPPPPAHWRDAEPIRDARAGYLHHLDENGLASWACEHETEIRLLVR
PGDYVFPGAPIALIKPPRDGAEEAVRDATALSPTLTSSDDLRFAIRQLVEVAVRALSPGINDPHTALSVLNRLGAALCDM
QPVRMKSGVVVKQGRLALVVPHLQYDELVDAMLHMIRQNAAGKPAVLIGMLEVLTQVASVERDPPRLSSVRRHADLVMGD
AERDVRGPDDLADVRARYWAFVDMAEHGPLGPFKL

Specific function: Unknown

COG id: COG4325

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018723 [H]

Pfam domain/function: PF10011 DUF2254 [H]

EC number: NA

Molecular weight: Translated: 47157; Mature: 47157

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNARLRKLYDDLSDTFWLVPALLVLLGTVAAFGMIEIDRSGTVPAWLLENWLYNGGATGA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHCCCCHHH
RTLLGAVASSTIGVAGTVFSITIAALSLAAGQMGPRLLRNFTRDRGNQITLGIFLGTFCY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEHHHHHHHHHH
ALIVLRSVRTADEGAFVPHLALGVGIALGFICVATLVYFVDHMASRINVDTVIGLVSDDV
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
RRVMRGLTDDAPQPEPPPPAHWRDAEPIRDARAGYLHHLDENGLASWACEHETEIRLLVR
HHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHCCCCCCCEEEEEC
PGDYVFPGAPIALIKPPRDGAEEAVRDATALSPTLTSSDDLRFAIRQLVEVAVRALSPGI
CCCEECCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
NDPHTALSVLNRLGAALCDMQPVRMKSGVVVKQGRLALVVPHLQYDELVDAMLHMIRQNA
CCHHHHHHHHHHHHHHHHCCCCHHHCCCEEEECCCEEEEECCCCHHHHHHHHHHHHHHCC
AGKPAVLIGMLEVLTQVASVERDPPRLSSVRRHADLVMGDAERDVRGPDDLADVRARYWA
CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
FVDMAEHGPLGPFKL
HHHHHHCCCCCCCCC
>Mature Secondary Structure
MNARLRKLYDDLSDTFWLVPALLVLLGTVAAFGMIEIDRSGTVPAWLLENWLYNGGATGA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHCCCCHHH
RTLLGAVASSTIGVAGTVFSITIAALSLAAGQMGPRLLRNFTRDRGNQITLGIFLGTFCY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEHHHHHHHHHH
ALIVLRSVRTADEGAFVPHLALGVGIALGFICVATLVYFVDHMASRINVDTVIGLVSDDV
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
RRVMRGLTDDAPQPEPPPPAHWRDAEPIRDARAGYLHHLDENGLASWACEHETEIRLLVR
HHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHCCCCCCCEEEEEC
PGDYVFPGAPIALIKPPRDGAEEAVRDATALSPTLTSSDDLRFAIRQLVEVAVRALSPGI
CCCEECCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
NDPHTALSVLNRLGAALCDMQPVRMKSGVVVKQGRLALVVPHLQYDELVDAMLHMIRQNA
CCHHHHHHHHHHHHHHHHCCCCHHHCCCEEEECCCEEEEECCCCHHHHHHHHHHHHHHCC
AGKPAVLIGMLEVLTQVASVERDPPRLSSVRRHADLVMGDAERDVRGPDDLADVRARYWA
CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
FVDMAEHGPLGPFKL
HHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]