| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86748147
Identifier: 86748147
GI number: 86748147
Start: 1173131
End: 1173553
Strand: Direct
Name: 86748147
Synonym: RPB_1022
Alternate gene names: NA
Gene position: 1173131-1173553 (Clockwise)
Preceding gene: 86748145
Following gene: 86748149
Centisome position: 22.0
GC content: 70.92
Gene sequence:
>423_bases ATGATGAAGATGACTCACATGCTGCCGGCCATGGCGCTGATCGCTGGATCGCTGGCGGTCGCCACGGTTCCGGCTGCGGC CGCGCCGCTGATGGCCGGTGTCCAGCCCACCGTGGCGGCGCCGAATGTCGAGCAGGTGCAGTACCGCGGTCATCGCGGCG GCTGGCACGGCGGCCCGCGCTATGGCCACCGCGGCTATGGCTATGGTCATCGCGGCTACGGTCACCGCGGTTATGGTTAC GGGGCCGGCGCGGCGCTCGGCGGCCTCGCCGCCGGCGCGATCATCGGCGGCGCGATCGCCAACAGCCAGGCGCAGGCGGC GCAGGGCGACGCGGTGGCGTATTGCTCGCAGCGCTTCAAGTCCTACGACCCGGCGTCGGGCACCTATCTGGGCTACGACG GCAACCGGCATTCCTGCCCGTAA
Upstream 100 bases:
>100_bases GGGCACAATGCGGGCGAATTGTCGCCGCGGGCGGGGAAAAGCGGAACGTCGCGGAGGGGCGGCCGTTAGCTAGGCAGACA GCACACAAGGAGAGAATTCG
Downstream 100 bases:
>100_bases CGGCAGGGCTTCCCCAAATCGATCAGCCGCTCGGGATCTCCCGGGCGGCTTTTTGATGAGCGGAGATCGGTGATCAGTCC GTTGCTTCGTCGCCGTGGGT
Product: BA14K-like
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MMKMTHMLPAMALIAGSLAVATVPAAAAPLMAGVQPTVAAPNVEQVQYRGHRGGWHGGPRYGHRGYGYGHRGYGHRGYGY GAGAALGGLAAGAIIGGAIANSQAQAAQGDAVAYCSQRFKSYDPASGTYLGYDGNRHSCP
Sequences:
>Translated_140_residues MMKMTHMLPAMALIAGSLAVATVPAAAAPLMAGVQPTVAAPNVEQVQYRGHRGGWHGGPRYGHRGYGYGHRGYGHRGYGY GAGAALGGLAAGAIIGGAIANSQAQAAQGDAVAYCSQRFKSYDPASGTYLGYDGNRHSCP >Mature_140_residues MMKMTHMLPAMALIAGSLAVATVPAAAAPLMAGVQPTVAAPNVEQVQYRGHRGGWHGGPRYGHRGYGYGHRGYGHRGYGY GAGAALGGLAAGAIIGGAIANSQAQAAQGDAVAYCSQRFKSYDPASGTYLGYDGNRHSCP
Specific function: Has immunoglobulin-binding and hemagglutination properties, and can bind to mannose. Essential for virulence. May be involved in LPS biosynthesis or polysaccharide transport [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BA14k family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012413 [H]
Pfam domain/function: PF07886 BA14K [H]
EC number: NA
Molecular weight: Translated: 14293; Mature: 14293
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKMTHMLPAMALIAGSLAVATVPAAAAPLMAGVQPTVAAPNVEQVQYRGHRGGWHGGPR CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHEECCCCCCCCCCCC YGHRGYGYGHRGYGHRGYGYGAGAALGGLAAGAIIGGAIANSQAQAAQGDAVAYCSQRFK CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHH SYDPASGTYLGYDGNRHSCP CCCCCCCCEECCCCCCCCCC >Mature Secondary Structure MMKMTHMLPAMALIAGSLAVATVPAAAAPLMAGVQPTVAAPNVEQVQYRGHRGGWHGGPR CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHEECCCCCCCCCCCC YGHRGYGYGHRGYGHRGYGYGAGAALGGLAAGAIIGGAIANSQAQAAQGDAVAYCSQRFK CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHH SYDPASGTYLGYDGNRHSCP CCCCCCCCEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA