Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is 86748141
Identifier: 86748141
GI number: 86748141
Start: 1165395
End: 1165679
Strand: Direct
Name: 86748141
Synonym: RPB_1016
Alternate gene names: NA
Gene position: 1165395-1165679 (Clockwise)
Preceding gene: 86748139
Following gene: 86748142
Centisome position: 21.86
GC content: 69.12
Gene sequence:
>285_bases ATGGCTGTCCGGTTGATCATCTTCTGGCTGGTGTTGGCCGCGGGCTTCGGCTGGGGCGCGTGGTTCGTCGCGCGCGCGCC GCGCCGGGCGCTGTGGGTGCGGATCGCCGCCGCCGCCGTGCTGCTGGTGGCCTGCGCCGTGTCGTTTCTGATGTACGGCG CCGATCTGGAAAAGAACCTCGGCTCGGTGATCCTGTATTTCGTGGTGTGGAGCTCGGTGTTCGGCCTGTCGGCCGCCTGC GCCGGCACCATCGTCGGCACGCTGGTGGCGCTGCTGATCGGCTGA
Upstream 100 bases:
>100_bases GAATACCGTCGAAATCTACCGGAAAACCATCGGCGGTGCGATGCGTCATGCCATCGTCGGCTTCACGCGCTAGCCCGGAG CCTGTAACAAGGAGGTCAGA
Downstream 100 bases:
>100_bases ACGGCGCTTTCATCCGTCATGTCTGGCGTTCTATGCTGCGATCGATTCCGATCGCGGAGCAACGACGATGGCCGCCACGA CTTTCTCAGCCTCGGGCACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 94; Mature: 93
Protein sequence:
>94_residues MAVRLIIFWLVLAAGFGWGAWFVARAPRRALWVRIAAAAVLLVACAVSFLMYGADLEKNLGSVILYFVVWSSVFGLSAAC AGTIVGTLVALLIG
Sequences:
>Translated_94_residues MAVRLIIFWLVLAAGFGWGAWFVARAPRRALWVRIAAAAVLLVACAVSFLMYGADLEKNLGSVILYFVVWSSVFGLSAAC AGTIVGTLVALLIG >Mature_93_residues AVRLIIFWLVLAAGFGWGAWFVARAPRRALWVRIAAAAVLLVACAVSFLMYGADLEKNLGSVILYFVVWSSVFGLSAACA GTIVGTLVALLIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9974; Mature: 9843
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVRLIIFWLVLAAGFGWGAWFVARAPRRALWVRIAAAAVLLVACAVSFLMYGADLEKNL CHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH GSVILYFVVWSSVFGLSAACAGTIVGTLVALLIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AVRLIIFWLVLAAGFGWGAWFVARAPRRALWVRIAAAAVLLVACAVSFLMYGADLEKNL HHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH GSVILYFVVWSSVFGLSAACAGTIVGTLVALLIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA