Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

Click here to switch to the map view.

The map label for this gene is 86748141

Identifier: 86748141

GI number: 86748141

Start: 1165395

End: 1165679

Strand: Direct

Name: 86748141

Synonym: RPB_1016

Alternate gene names: NA

Gene position: 1165395-1165679 (Clockwise)

Preceding gene: 86748139

Following gene: 86748142

Centisome position: 21.86

GC content: 69.12

Gene sequence:

>285_bases
ATGGCTGTCCGGTTGATCATCTTCTGGCTGGTGTTGGCCGCGGGCTTCGGCTGGGGCGCGTGGTTCGTCGCGCGCGCGCC
GCGCCGGGCGCTGTGGGTGCGGATCGCCGCCGCCGCCGTGCTGCTGGTGGCCTGCGCCGTGTCGTTTCTGATGTACGGCG
CCGATCTGGAAAAGAACCTCGGCTCGGTGATCCTGTATTTCGTGGTGTGGAGCTCGGTGTTCGGCCTGTCGGCCGCCTGC
GCCGGCACCATCGTCGGCACGCTGGTGGCGCTGCTGATCGGCTGA

Upstream 100 bases:

>100_bases
GAATACCGTCGAAATCTACCGGAAAACCATCGGCGGTGCGATGCGTCATGCCATCGTCGGCTTCACGCGCTAGCCCGGAG
CCTGTAACAAGGAGGTCAGA

Downstream 100 bases:

>100_bases
ACGGCGCTTTCATCCGTCATGTCTGGCGTTCTATGCTGCGATCGATTCCGATCGCGGAGCAACGACGATGGCCGCCACGA
CTTTCTCAGCCTCGGGCACG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 94; Mature: 93

Protein sequence:

>94_residues
MAVRLIIFWLVLAAGFGWGAWFVARAPRRALWVRIAAAAVLLVACAVSFLMYGADLEKNLGSVILYFVVWSSVFGLSAAC
AGTIVGTLVALLIG

Sequences:

>Translated_94_residues
MAVRLIIFWLVLAAGFGWGAWFVARAPRRALWVRIAAAAVLLVACAVSFLMYGADLEKNLGSVILYFVVWSSVFGLSAAC
AGTIVGTLVALLIG
>Mature_93_residues
AVRLIIFWLVLAAGFGWGAWFVARAPRRALWVRIAAAAVLLVACAVSFLMYGADLEKNLGSVILYFVVWSSVFGLSAACA
GTIVGTLVALLIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9974; Mature: 9843

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVRLIIFWLVLAAGFGWGAWFVARAPRRALWVRIAAAAVLLVACAVSFLMYGADLEKNL
CHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
GSVILYFVVWSSVFGLSAACAGTIVGTLVALLIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AVRLIIFWLVLAAGFGWGAWFVARAPRRALWVRIAAAAVLLVACAVSFLMYGADLEKNL
HHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
GSVILYFVVWSSVFGLSAACAGTIVGTLVALLIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA