| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is ilvE [H]
Identifier: 86748124
GI number: 86748124
Start: 1143283
End: 1144155
Strand: Reverse
Name: ilvE [H]
Synonym: RPB_0999
Alternate gene names: 86748124
Gene position: 1144155-1143283 (Counterclockwise)
Preceding gene: 86748125
Following gene: 86748121
Centisome position: 21.46
GC content: 66.09
Gene sequence:
>873_bases ATGACTCCGGCCCCCGCACCGATCAGCTTCTCCAAGACCTGGACGTTCTTCGAGGGCGACTGGCACGACGGCAATGTGCC GATCATGGGGCCGCGCACCCATGCGGCCTGGCTCGGCTCGATGGTGTTCGACGGCGCCCGCGCCTTCGAAGGCGTGACGC CCGATCTCGACCGACACATCGCGCGGGTCAATTGGTCGGCGACCAACTTCAAGCTCAAGGCGATGATCGACGAAGCGACC TGGCACGGCCTGGTGCAGGACGGGCTGAAGCGGTTCGCCGCCGACGCCGAACTCTACATCCGGCCGATGTATTGGGCGCA GACCGGCGCCGGCGGCGGCGTGCTGTTCGATCCGGAGACGACCAACTGGTGCCTGTGCATCTATGAGGCGCCGATGCCGA AGCCGACCGGGCTGTCGATCACGCTGTCGCCGTTCCGCAAGCCGAGCGCCGATTGCGCCGTGGTCGACGCCAAGGCCGGC TGCCTCTATCCGAACAATTCGCGCGCGATGATCGAGGCGCAGAGCCGCGGGTTCGGCAACTGCCTGATGCGCGACATGCT CGGCAACATCGCCGAGCTCGGCAATTCCAACATCTTCATGGCCAAGGACGGCGTGGTCTATACGCCGGCGCCGAACGGCA CCTTCCTCAACGGCGTGACGCGGCAGCGCGTGATCGAGCTGCTGCGCGGCGACGGCGTCACCGTGGTCGAATCGACGCTG ACCTATCGCGATTTCGAGACCGCGGACGAGATCTTCGCCTCGGGCAATTTCGCCAAGGTGCAGCCGATCGTCCGGATCGA CGACCGCGCGCTGCAGCCGGGGCCGTTATTCGCCAAAGCGCGCAAGCTGTATTGGGAGTTCGCGCACGGCTGA
Upstream 100 bases:
>100_bases GCCGCAGGCGAGCTGCGGCTGTGAGGCCGGCGCCGCACGATCAGCAAGGTTGCATAGATTTCAGTCGCGGCCCGGCCGCG CGAAGCGATGGATCAGAACG
Downstream 100 bases:
>100_bases GCTCGGCAAGCGTCATTCACGCGCGCTGGAAGCGTCATCCTGAGGTGCGAGCGTAGCGAGCCTCGAAGGATGCGGCGACG GAGTGTGCGGCTCGTCCTTC
Product: aminotransferase
Products: NA
Alternate protein names: BCAT [H]
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MTPAPAPISFSKTWTFFEGDWHDGNVPIMGPRTHAAWLGSMVFDGARAFEGVTPDLDRHIARVNWSATNFKLKAMIDEAT WHGLVQDGLKRFAADAELYIRPMYWAQTGAGGGVLFDPETTNWCLCIYEAPMPKPTGLSITLSPFRKPSADCAVVDAKAG CLYPNNSRAMIEAQSRGFGNCLMRDMLGNIAELGNSNIFMAKDGVVYTPAPNGTFLNGVTRQRVIELLRGDGVTVVESTL TYRDFETADEIFASGNFAKVQPIVRIDDRALQPGPLFAKARKLYWEFAHG
Sequences:
>Translated_290_residues MTPAPAPISFSKTWTFFEGDWHDGNVPIMGPRTHAAWLGSMVFDGARAFEGVTPDLDRHIARVNWSATNFKLKAMIDEAT WHGLVQDGLKRFAADAELYIRPMYWAQTGAGGGVLFDPETTNWCLCIYEAPMPKPTGLSITLSPFRKPSADCAVVDAKAG CLYPNNSRAMIEAQSRGFGNCLMRDMLGNIAELGNSNIFMAKDGVVYTPAPNGTFLNGVTRQRVIELLRGDGVTVVESTL TYRDFETADEIFASGNFAKVQPIVRIDDRALQPGPLFAKARKLYWEFAHG >Mature_289_residues TPAPAPISFSKTWTFFEGDWHDGNVPIMGPRTHAAWLGSMVFDGARAFEGVTPDLDRHIARVNWSATNFKLKAMIDEATW HGLVQDGLKRFAADAELYIRPMYWAQTGAGGGVLFDPETTNWCLCIYEAPMPKPTGLSITLSPFRKPSADCAVVDAKAGC LYPNNSRAMIEAQSRGFGNCLMRDMLGNIAELGNSNIFMAKDGVVYTPAPNGTFLNGVTRQRVIELLRGDGVTVVESTLT YRDFETADEIFASGNFAKVQPIVRIDDRALQPGPLFAKARKLYWEFAHG
Specific function: Acts on leucine, isoleucine and valine [H]
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Escherichia coli, GI48994963, Length=268, Percent_Identity=27.2388059701493, Blast_Score=86, Evalue=3e-18,
Paralogues:
None
Copy number: 2342 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 11,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001544 - InterPro: IPR018300 - InterPro: IPR005785 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =2.6.1.42 [H]
Molecular weight: Translated: 31948; Mature: 31817
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: PS00770 AA_TRANSFER_CLASS_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPAPAPISFSKTWTFFEGDWHDGNVPIMGPRTHAAWLGSMVFDGARAFEGVTPDLDRHI CCCCCCCCCCCCEEEEEECCCCCCCEEEECCCHHHHHHHHHHHCCHHHHCCCCCCHHHHE ARVNWSATNFKLKAMIDEATWHGLVQDGLKRFAADAELYIRPMYWAQTGAGGGVLFDPET EEEECCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCEEECCCC TNWCLCIYEAPMPKPTGLSITLSPFRKPSADCAVVDAKAGCLYPNNSRAMIEAQSRGFGN CCEEEEEEECCCCCCCCCEEEECCCCCCCCCEEEEECCCCEECCCCCCEEEEECCCCCHH CLMRDMLGNIAELGNSNIFMAKDGVVYTPAPNGTFLNGVTRQRVIELLRGDGVTVVESTL HHHHHHHHHHHHHCCCCEEEECCCEEECCCCCCCEECCHHHHHHHHHHHCCCCEEEEEEE TYRDFETADEIFASGNFAKVQPIVRIDDRALQPGPLFAKARKLYWEFAHG EECCHHHHHHHHHCCCCEEECEEEEECCCCCCCCCHHHHHHHHHEEECCC >Mature Secondary Structure TPAPAPISFSKTWTFFEGDWHDGNVPIMGPRTHAAWLGSMVFDGARAFEGVTPDLDRHI CCCCCCCCCCCEEEEEECCCCCCCEEEECCCHHHHHHHHHHHCCHHHHCCCCCCHHHHE ARVNWSATNFKLKAMIDEATWHGLVQDGLKRFAADAELYIRPMYWAQTGAGGGVLFDPET EEEECCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCEEECCCC TNWCLCIYEAPMPKPTGLSITLSPFRKPSADCAVVDAKAGCLYPNNSRAMIEAQSRGFGN CCEEEEEEECCCCCCCCCEEEECCCCCCCCCEEEEECCCCEECCCCCCEEEEECCCCCHH CLMRDMLGNIAELGNSNIFMAKDGVVYTPAPNGTFLNGVTRQRVIELLRGDGVTVVESTL HHHHHHHHHHHHHCCCCEEEECCCEEECCCCCCCEECCHHHHHHHHHHHCCCCEEEEEEE TYRDFETADEIFASGNFAKVQPIVRIDDRALQPGPLFAKARKLYWEFAHG EECCHHHHHHHHHCCCCEEECEEEEECCCCCCCCCHHHHHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]