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The map label for this gene is 86748016

Identifier: 86748016

GI number: 86748016

Start: 1020195

End: 1021115

Strand: Reverse

Name: 86748016

Synonym: RPB_0890

Alternate gene names: NA

Gene position: 1021115-1020195 (Counterclockwise)

Preceding gene: 86748017

Following gene: 86748015

Centisome position: 19.15

GC content: 69.38

Gene sequence:

>921_bases
ATGAACTTTGGGATCGCGAACGGCCCTGCCCGCGACATTCTCCAGCGCGGCGTGAGCGCTCTGCTGATCGCAACACTGTG
CGCGACCGCGCTGCCGGCGCGCGCCGCCGACGAGGCGGAGCCCAATGCGGTCAAGGGCCAGGCGGTGACGGTGCTGAAGG
CGGCCAAATCCTGCTTTCCGGCGATCGTCGAAGTCTCCGGCTTCCTGATCCCACGCGACGAAATCTCGATCCGCCCCGAC
CGCCCCGGCGCGCGGGTCACTGAGGTGATGGCCGACGCCGGCGAAATCGTCGCGCAGGGCCAGGCGTTGGCGAAACTCGC
CGGGCCCGACAGCGGATCGACGATCTCCGCGCCGGTCGCGGGCCTCGTCTCCAGCTCCACCGCGGTGATCGGATCGCCGG
CCTCGGCGAAGGGCGAAGCGTTGTACACCATCATCGCGCGCAGCGAATTCGATCTGGTCGGCCAGGTGCCGACGCGCAAT
CTCGCGCAGCTCGCGGTCAACCAGACCGCCGCGGTCAAGATCGTCGGGGTGCCCGACGAGATCGAAGGCCGGGTGCGGCG
CGTGTCGTCGACGGTGGAGCCCAACAGCCAGCTCGCCAGCGTGTTCGTCGGCGTCAGCTCGACCAAGCGGCTGTTGTCCA
ACGCCTCGGGCCGCGCGATGATCAAGACCGGCGAAAGCTGCGGCATCTCGGTGCCGCTGACGGCCGTGCTCTACAGCTCG
GCCGGCACAGTCGTGCAGGTGGTGCGGCGCCAGACGGTCGAGACCAAGCGCGTCGAGGTCGGGCTGATGAACGGCGGCAA
TGTCGAGATCCGCGAAGGCCTGCAGGAAGGCGACATCATCGTCGCCCGTGCCGGCGCGTTGCTGCGCGAAGGCGACCCGG
TGCGCCCGGTGGTCGCCGACGCGAAGCCGGCCGAGAAGTAA

Upstream 100 bases:

>100_bases
CGCGCGTCGTGAGCGCTTGGCGCGGCGGACGCCGCATGATTAGAGTTGCAGGCGGACTTGCATGTCATTCGGGATGCAGG
ACGGGACAGAGGGTGTGACG

Downstream 100 bases:

>100_bases
CCGCTACGCGGCGCTGCATCGCCACGCGGATCGCGTCATTTTCATCGCACAACTAACTGAACTCGATCAGCGCCTGCACG
ACGAAGGTCGCTCCGACTGT

Product: secretion protein HlyD

Products: NA

Alternate protein names: RND Family Efflux Transporter MFP Subunit; Efflux Transporter RND Family MFP Subunit; HlyD Family Secretion Protein; RND Efflux Membrane Fusion Protein; Multidrug RND Transporter Membrane Fusion Protein; Protein Secretion Protein; Component Of Multidrug Efflux System; Signal Peptide; Efflux Protein; Transcriptional Regulator Fis Family; Secretion Protein; Secretion HlyD Protein; Fis Family Transcriptional Regulator

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MNFGIANGPARDILQRGVSALLIATLCATALPARAADEAEPNAVKGQAVTVLKAAKSCFPAIVEVSGFLIPRDEISIRPD
RPGARVTEVMADAGEIVAQGQALAKLAGPDSGSTISAPVAGLVSSSTAVIGSPASAKGEALYTIIARSEFDLVGQVPTRN
LAQLAVNQTAAVKIVGVPDEIEGRVRRVSSTVEPNSQLASVFVGVSSTKRLLSNASGRAMIKTGESCGISVPLTAVLYSS
AGTVVQVVRRQTVETKRVEVGLMNGGNVEIREGLQEGDIIVARAGALLREGDPVRPVVADAKPAEK

Sequences:

>Translated_306_residues
MNFGIANGPARDILQRGVSALLIATLCATALPARAADEAEPNAVKGQAVTVLKAAKSCFPAIVEVSGFLIPRDEISIRPD
RPGARVTEVMADAGEIVAQGQALAKLAGPDSGSTISAPVAGLVSSSTAVIGSPASAKGEALYTIIARSEFDLVGQVPTRN
LAQLAVNQTAAVKIVGVPDEIEGRVRRVSSTVEPNSQLASVFVGVSSTKRLLSNASGRAMIKTGESCGISVPLTAVLYSS
AGTVVQVVRRQTVETKRVEVGLMNGGNVEIREGLQEGDIIVARAGALLREGDPVRPVVADAKPAEK
>Mature_306_residues
MNFGIANGPARDILQRGVSALLIATLCATALPARAADEAEPNAVKGQAVTVLKAAKSCFPAIVEVSGFLIPRDEISIRPD
RPGARVTEVMADAGEIVAQGQALAKLAGPDSGSTISAPVAGLVSSSTAVIGSPASAKGEALYTIIARSEFDLVGQVPTRN
LAQLAVNQTAAVKIVGVPDEIEGRVRRVSSTVEPNSQLASVFVGVSSTKRLLSNASGRAMIKTGESCGISVPLTAVLYSS
AGTVVQVVRRQTVETKRVEVGLMNGGNVEIREGLQEGDIIVARAGALLREGDPVRPVVADAKPAEK

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31450; Mature: 31450

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: PS50968 BIOTINYL_LIPOYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFGIANGPARDILQRGVSALLIATLCATALPARAADEAEPNAVKGQAVTVLKAAKSCFP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
AIVEVSGFLIPRDEISIRPDRPGARVTEVMADAGEIVAQGQALAKLAGPDSGSTISAPVA
HHHHHHCEEEECCCCEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEECCCHH
GLVSSSTAVIGSPASAKGEALYTIIARSEFDLVGQVPTRNLAQLAVNQTAAVKIVGVPDE
HHHCCCCEEECCCCCCCCCEEEEEEECCCCCEECCCCCCHHHHHHHCCCEEEEEEECCHH
IEGRVRRVSSTVEPNSQLASVFVGVSSTKRLLSNASGRAMIKTGESCGISVPLTAVLYSS
HHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHC
AGTVVQVVRRQTVETKRVEVGLMNGGNVEIREGLQEGDIIVARAGALLREGDPVRPVVAD
CCHHHHHHHHHHHHHHEEEEEECCCCCCHHHCCCCCCCEEEEECCHHHHCCCCCCCEECC
AKPAEK
CCCCCC
>Mature Secondary Structure
MNFGIANGPARDILQRGVSALLIATLCATALPARAADEAEPNAVKGQAVTVLKAAKSCFP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
AIVEVSGFLIPRDEISIRPDRPGARVTEVMADAGEIVAQGQALAKLAGPDSGSTISAPVA
HHHHHHCEEEECCCCEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEECCCHH
GLVSSSTAVIGSPASAKGEALYTIIARSEFDLVGQVPTRNLAQLAVNQTAAVKIVGVPDE
HHHCCCCEEECCCCCCCCCEEEEEEECCCCCEECCCCCCHHHHHHHCCCEEEEEEECCHH
IEGRVRRVSSTVEPNSQLASVFVGVSSTKRLLSNASGRAMIKTGESCGISVPLTAVLYSS
HHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHC
AGTVVQVVRRQTVETKRVEVGLMNGGNVEIREGLQEGDIIVARAGALLREGDPVRPVVAD
CCHHHHHHHHHHHHHHEEEEEECCCCCCHHHCCCCCCCEEEEECCHHHHCCCCCCCEECC
AKPAEK
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA