| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is cyaB [H]
Identifier: 86748017
GI number: 86748017
Start: 1021204
End: 1023672
Strand: Reverse
Name: cyaB [H]
Synonym: RPB_0891
Alternate gene names: 86748017
Gene position: 1023672-1021204 (Counterclockwise)
Preceding gene: 86748018
Following gene: 86748016
Centisome position: 19.2
GC content: 69.06
Gene sequence:
>2469_bases ATGCCCGGCCTCGAGACCATCCCCCGAACGCGACGTCGCGGCCTGTTCGCGAAATACGTCACGTCGCTGGTCGGGCTGGT GGTGTTCGTGCTCGCGGTCAACGGCGCGCTGGAAATCTGGTTCAGCTATCGACAGACCCGCACGGCGCTGATCGACGCGA TGGCGGAGAAGGCCGAAGCGAGCGCGCGGCGGATCGCGCAGGCGATGACCGAGCTCGAGCGCCAGATCAGTTGGACCACG CGCGCCAGCGTGCAGACGCTGGAGCAGCGCCGCACCGACTACACCCAGCTCATGCAGCAGGTGCCGGCGATCAGCCAGCT CGCGCTGATCGACGGCCAGGGCCGCGAGGCGCTGCGCCTGACCCGCTCGACGGGACCGGGCGGTGGCGAGGAATTCTGGC GCGATCCGCAGGTCGCACGGGCCGCCGAAACCGGCGTGTCGATCGGCCAGACCCGCTTCCGCAACGGACGTCCGTTCATC GTCGTCGCGGTGGCGCATGCCGGACGCGACCCGGCGATCACCGTGGCCGAGATCGACCTGCGGTTTCTGTCGGAACTGGT CGGCGACGCCCAGGCCGGCAAGGTCGGGATCGCCTATGTGATCGACCCCGCAGGCCGATTGCTGGCGAGTTCGCGCGACA GCGACACCCTCGGCGACGACATTGCGAGCCGGCGTCAGGTCGCCGCGCTGTTGCGCGATCCGCCGCAGGCGTTGGCGTCG GGACAGGACGGCGACGGCAACGCGATGCTGGTGGCGTCGCGCCCGGTGGCGAAGCTCGGCTGGTTCGTGCTGTTCGAACA GCCGCGCAGCCAGGCCTTCGCATCGATCGGCGAAGTGCTGCTGCGAATCGCCGGCCTGATCGCGCTCGGCCTGATCGTCG CGATCATCGCCAGCATGCTGCTGGCGCGGCGGATGCTGGTGCCGATCGACGCGCTGCGCGCCGGCGCCAGCCGGCTCGGC GGCGGCGATTTCGGCCAGCGCATCGAAGTCCGCACCGGCGACGAGCTGGAAGAGCTGTCCGATCAGTTCAACAGCATGGC CGGCCAATTGCGGGAGACCTATGCGGGGCTCGAAAGCAAGGTCGAGGAGCGCACCCGCGACCTCGAGCGGTCGATCAACG AACTGAAGGCGCTGGAAGAAGTCGGCCGCGCCATCGCCTCCTCGCTCGATCTCGATGCGGTGCTACCGACGGTGGCGGCG CGGGCGCTGGAGATCACCCGCGCCGATGCGGTGCTGATCTTCAGCTACGATCCGCTGCAGCGGCGGTTCGATCTCGCCGA AGCCAAGGGCATCGACCCGCCGACCGACGGCGGCGTGGCCTATGCGTCGATCGACGCCGACGGCAGCGTGCTCGGCGACG CCGCGCAGTCCGGCCAGCCGATCGCGGTGCCGGATCTGTCCGCCGCGCCCGACCATCCTCTGAAGGCGCTCGCGCTCGCC GCCGGCTTCGCCTCGGTGCTGGTGGTGCCGCTGCTCGACCAGCACGGCGCGCTCGGCGCGCTGGTGGTGCTGCGGCGCAG CGCCGGCGACTTTGCCGACAATCTGATCGGGCTGATGCGCACCTTCGCGCATCAATCGGAACTGGCGATGCGCAACGCCC GGCTGTTCCGCGAGGTCGACCACAAGGGCCGCGAACTGGCCAGCGCCCACGACACCGTGCAGCTTCAGGCGGCGCAACTG CGGGAGCAGACCGATCAGCTCAAAGACTGGAATCGCTCACTCGAGGAGCGCGTCGAAAAGCAGCTCGGCGAGATCGAACG GATCCGGCGGCTGGAGCGCTTCCTCGCGCCGCAGGTGGCGCAACTGATCGCCTCCTCCGACGGCCATGACGCACTGCTCG ACAGCCATCGCCGCGAAGTCACCGTGGTGTTCTGCGATCTGCGCGGCTTCACCGCCTTCACCGAAGCCTCCGAGCCGGAA GAGGCGATGAACGTGCTGCGCGAGTATCACGCAGCTTTGGGCGAACTGATCTTCCGCTACGAAGGCACCCTCGACCGCTT CGCCGGCGACGGCGTGATGATCCTGTTCAACGCCCCGATCCCGTTCGCCGATCATACCCGACGCGCGGTGAAGATGGCGG TCGAGATGCGCGACGCGCTGGCCACGCTGACCGAAAAATGGAGCCATCGCGGCCACAGCCTCGGCTTCGGCATCGGCATC GCGGTCGGCTATGCGACGATCGGCCAGGTCGGTTTCGAGCACCGGCTGGAATACGCCGCGATCGGCAGCGTCACCAACCT CGCCTCGCGGCTGTGCGCCGAAGCCGCGCCGGGCCAGATTATCGTCAGCCAGCGCGCCTATGCGATGGTCGAGGACTGGG CCGAGGCGCAGCCGATCGAACCGCTGACGCTGAAAGGCTTCAGCCGCCCGATACCGGCCGTCGAAATTCTGCGCTGGCGT GAAACCTCCGACGCCGCTGCGGACACCCATGAGACGCGCCCCGCGGCCAGCGCCGGCCGCGCGTCGTGA
Upstream 100 bases:
>100_bases CGAGCCCGCGGCAGCGCTCGCCCCGCATTCTGTGATAAGACCAAGTCCGGTCCCGCGCGGCCCGCCGGTCAGCGGCGCTG TGCGGCTGCAAAGGAACAGA
Downstream 100 bases:
>100_bases GCGCTTGGCGCGGCGGACGCCGCATGATTAGAGTTGCAGGCGGACTTGCATGTCATTCGGGATGCAGGACGGGACAGAGG GTGTGACGATGAACTTTGGG
Product: adenylate/guanylate cyclase
Products: NA
Alternate protein names: ATP pyrophosphate-lyase 2; Adenylyl cyclase 2; AC2 [H]
Number of amino acids: Translated: 822; Mature: 821
Protein sequence:
>822_residues MPGLETIPRTRRRGLFAKYVTSLVGLVVFVLAVNGALEIWFSYRQTRTALIDAMAEKAEASARRIAQAMTELERQISWTT RASVQTLEQRRTDYTQLMQQVPAISQLALIDGQGREALRLTRSTGPGGGEEFWRDPQVARAAETGVSIGQTRFRNGRPFI VVAVAHAGRDPAITVAEIDLRFLSELVGDAQAGKVGIAYVIDPAGRLLASSRDSDTLGDDIASRRQVAALLRDPPQALAS GQDGDGNAMLVASRPVAKLGWFVLFEQPRSQAFASIGEVLLRIAGLIALGLIVAIIASMLLARRMLVPIDALRAGASRLG GGDFGQRIEVRTGDELEELSDQFNSMAGQLRETYAGLESKVEERTRDLERSINELKALEEVGRAIASSLDLDAVLPTVAA RALEITRADAVLIFSYDPLQRRFDLAEAKGIDPPTDGGVAYASIDADGSVLGDAAQSGQPIAVPDLSAAPDHPLKALALA AGFASVLVVPLLDQHGALGALVVLRRSAGDFADNLIGLMRTFAHQSELAMRNARLFREVDHKGRELASAHDTVQLQAAQL REQTDQLKDWNRSLEERVEKQLGEIERIRRLERFLAPQVAQLIASSDGHDALLDSHRREVTVVFCDLRGFTAFTEASEPE EAMNVLREYHAALGELIFRYEGTLDRFAGDGVMILFNAPIPFADHTRRAVKMAVEMRDALATLTEKWSHRGHSLGFGIGI AVGYATIGQVGFEHRLEYAAIGSVTNLASRLCAEAAPGQIIVSQRAYAMVEDWAEAQPIEPLTLKGFSRPIPAVEILRWR ETSDAAADTHETRPAASAGRAS
Sequences:
>Translated_822_residues MPGLETIPRTRRRGLFAKYVTSLVGLVVFVLAVNGALEIWFSYRQTRTALIDAMAEKAEASARRIAQAMTELERQISWTT RASVQTLEQRRTDYTQLMQQVPAISQLALIDGQGREALRLTRSTGPGGGEEFWRDPQVARAAETGVSIGQTRFRNGRPFI VVAVAHAGRDPAITVAEIDLRFLSELVGDAQAGKVGIAYVIDPAGRLLASSRDSDTLGDDIASRRQVAALLRDPPQALAS GQDGDGNAMLVASRPVAKLGWFVLFEQPRSQAFASIGEVLLRIAGLIALGLIVAIIASMLLARRMLVPIDALRAGASRLG GGDFGQRIEVRTGDELEELSDQFNSMAGQLRETYAGLESKVEERTRDLERSINELKALEEVGRAIASSLDLDAVLPTVAA RALEITRADAVLIFSYDPLQRRFDLAEAKGIDPPTDGGVAYASIDADGSVLGDAAQSGQPIAVPDLSAAPDHPLKALALA AGFASVLVVPLLDQHGALGALVVLRRSAGDFADNLIGLMRTFAHQSELAMRNARLFREVDHKGRELASAHDTVQLQAAQL REQTDQLKDWNRSLEERVEKQLGEIERIRRLERFLAPQVAQLIASSDGHDALLDSHRREVTVVFCDLRGFTAFTEASEPE EAMNVLREYHAALGELIFRYEGTLDRFAGDGVMILFNAPIPFADHTRRAVKMAVEMRDALATLTEKWSHRGHSLGFGIGI AVGYATIGQVGFEHRLEYAAIGSVTNLASRLCAEAAPGQIIVSQRAYAMVEDWAEAQPIEPLTLKGFSRPIPAVEILRWR ETSDAAADTHETRPAASAGRAS >Mature_821_residues PGLETIPRTRRRGLFAKYVTSLVGLVVFVLAVNGALEIWFSYRQTRTALIDAMAEKAEASARRIAQAMTELERQISWTTR ASVQTLEQRRTDYTQLMQQVPAISQLALIDGQGREALRLTRSTGPGGGEEFWRDPQVARAAETGVSIGQTRFRNGRPFIV VAVAHAGRDPAITVAEIDLRFLSELVGDAQAGKVGIAYVIDPAGRLLASSRDSDTLGDDIASRRQVAALLRDPPQALASG QDGDGNAMLVASRPVAKLGWFVLFEQPRSQAFASIGEVLLRIAGLIALGLIVAIIASMLLARRMLVPIDALRAGASRLGG GDFGQRIEVRTGDELEELSDQFNSMAGQLRETYAGLESKVEERTRDLERSINELKALEEVGRAIASSLDLDAVLPTVAAR ALEITRADAVLIFSYDPLQRRFDLAEAKGIDPPTDGGVAYASIDADGSVLGDAAQSGQPIAVPDLSAAPDHPLKALALAA GFASVLVVPLLDQHGALGALVVLRRSAGDFADNLIGLMRTFAHQSELAMRNARLFREVDHKGRELASAHDTVQLQAAQLR EQTDQLKDWNRSLEERVEKQLGEIERIRRLERFLAPQVAQLIASSDGHDALLDSHRREVTVVFCDLRGFTAFTEASEPEE AMNVLREYHAALGELIFRYEGTLDRFAGDGVMILFNAPIPFADHTRRAVKMAVEMRDALATLTEKWSHRGHSLGFGIGIA VGYATIGQVGFEHRLEYAAIGSVTNLASRLCAEAAPGQIIVSQRAYAMVEDWAEAQPIEPLTLKGFSRPIPAVEILRWRE TSDAAADTHETRPAASAGRAS
Specific function: Acts As A Sensor For Nitrate/Nitrite And Transduces Signal Of Nitrate Availability To The Narl Protein And Of Both Nitrate/Nitrite To The Narp Protein. Narx Probably Activates Narl And Narp By Phosphorylation In The Presence Of Nitrate. Narx Also Plays A
COG id: COG2114
COG function: function code T; Adenylate cyclase, family 3 (some proteins contain HAMP domain)
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00211 Guanylate_cyc; PF00072 Response_reg [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 89257; Mature: 89125
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: PS50885 HAMP ; PS50125 GUANYLATE_CYCLASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGLETIPRTRRRGLFAKYVTSLVGLVVFVLAVNGALEIWFSYRQTRTALIDAMAEKAEA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH SARRIAQAMTELERQISWTTRASVQTLEQRRTDYTQLMQQVPAISQLALIDGQGREALRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHEECCCCCHHHEE TRSTGPGGGEEFWRDPQVARAAETGVSIGQTRFRNGRPFIVVAVAHAGRDPAITVAEIDL ECCCCCCCCHHHHCCCHHHHHHHHCCHHCHHHCCCCCCEEEEEEECCCCCCCEEEHHHHH RFLSELVGDAQAGKVGIAYVIDPAGRLLASSRDSDTLGDDIASRRQVAALLRDPPQALAS HHHHHHHCCCCCCCEEEEEEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHC GQDGDGNAMLVASRPVAKLGWFVLFEQPRSQAFASIGEVLLRIAGLIALGLIVAIIASML CCCCCCCEEEEECCCHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LARRMLVPIDALRAGASRLGGGDFGQRIEVRTGDELEELSDQFNSMAGQLRETYAGLESK HHHHHHCCHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VEERTRDLERSINELKALEEVGRAIASSLDLDAVLPTVAARALEITRADAVLIFSYDPLQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHH RRFDLAEAKGIDPPTDGGVAYASIDADGSVLGDAAQSGQPIAVPDLSAAPDHPLKALALA HHHHHHHHCCCCCCCCCCEEEEEECCCCCHHCCHHHCCCCEECCCCCCCCCCHHHHHHHH AGFASVLVVPLLDQHGALGALVVLRRSAGDFADNLIGLMRTFAHQSELAMRNARLFREVD HHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HKGRELASAHDTVQLQAAQLREQTDQLKDWNRSLEERVEKQLGEIERIRRLERFLAPQVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLIASSDGHDALLDSHRREVTVVFCDLRGFTAFTEASEPEEAMNVLREYHAALGELIFRY HHHHCCCCCHHHHHCCCCEEEEEEEECCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHH EGTLDRFAGDGVMILFNAPIPFADHTRRAVKMAVEMRDALATLTEKWSHRGHSLGFGIGI CCCHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH AVGYATIGQVGFEHRLEYAAIGSVTNLASRLCAEAAPGQIIVSQRAYAMVEDWAEAQPIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHCCCCC PLTLKGFSRPIPAVEILRWRETSDAAADTHETRPAASAGRAS CEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PGLETIPRTRRRGLFAKYVTSLVGLVVFVLAVNGALEIWFSYRQTRTALIDAMAEKAEA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH SARRIAQAMTELERQISWTTRASVQTLEQRRTDYTQLMQQVPAISQLALIDGQGREALRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHEECCCCCHHHEE TRSTGPGGGEEFWRDPQVARAAETGVSIGQTRFRNGRPFIVVAVAHAGRDPAITVAEIDL ECCCCCCCCHHHHCCCHHHHHHHHCCHHCHHHCCCCCCEEEEEEECCCCCCCEEEHHHHH RFLSELVGDAQAGKVGIAYVIDPAGRLLASSRDSDTLGDDIASRRQVAALLRDPPQALAS HHHHHHHCCCCCCCEEEEEEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHC GQDGDGNAMLVASRPVAKLGWFVLFEQPRSQAFASIGEVLLRIAGLIALGLIVAIIASML CCCCCCCEEEEECCCHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LARRMLVPIDALRAGASRLGGGDFGQRIEVRTGDELEELSDQFNSMAGQLRETYAGLESK HHHHHHCCHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VEERTRDLERSINELKALEEVGRAIASSLDLDAVLPTVAARALEITRADAVLIFSYDPLQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHH RRFDLAEAKGIDPPTDGGVAYASIDADGSVLGDAAQSGQPIAVPDLSAAPDHPLKALALA HHHHHHHHCCCCCCCCCCEEEEEECCCCCHHCCHHHCCCCEECCCCCCCCCCHHHHHHHH AGFASVLVVPLLDQHGALGALVVLRRSAGDFADNLIGLMRTFAHQSELAMRNARLFREVD HHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HKGRELASAHDTVQLQAAQLREQTDQLKDWNRSLEERVEKQLGEIERIRRLERFLAPQVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLIASSDGHDALLDSHRREVTVVFCDLRGFTAFTEASEPEEAMNVLREYHAALGELIFRY HHHHCCCCCHHHHHCCCCEEEEEEEECCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHH EGTLDRFAGDGVMILFNAPIPFADHTRRAVKMAVEMRDALATLTEKWSHRGHSLGFGIGI CCCHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH AVGYATIGQVGFEHRLEYAAIGSVTNLASRLCAEAAPGQIIVSQRAYAMVEDWAEAQPIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHCCCCC PLTLKGFSRPIPAVEILRWRETSDAAADTHETRPAASAGRAS CEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9523018; 8418825 [H]