| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is 86748012
Identifier: 86748012
GI number: 86748012
Start: 1013469
End: 1015490
Strand: Reverse
Name: 86748012
Synonym: RPB_0886
Alternate gene names: NA
Gene position: 1015490-1013469 (Counterclockwise)
Preceding gene: 86748015
Following gene: 86748009
Centisome position: 19.05
GC content: 70.87
Gene sequence:
>2022_bases ATGGTCGCCGACCGCGCCGGACACAACGTTGCGGTGGAGCAGCGCGGCAGGCACGCGGGGACCTCGCCATGGCCGGGGCG GCCGGGCTTTCTCGCCTGCTGGAACGGGTCCGCCGTCGATGCTGCGACCGTGCCGCCGCAGAGTCCCGAACTGAATTGCC TGCGCGGTGTGCTGCCACCGAACCTGCTGGAGGCCGCCCGCCGGCGCGCCGGCGAACTCGGAACGGGTGCCGATCAGGTG CTGATCCGATGGGGCGTGATCGACGAAACGACTTATCTGCATCGACTGGCCCGGCATCTCCGGATCGCCCCCGAGGATTT TGCGCAGGTCGGCCGCGACGACACGCCGTTGTGCGACGACCAGATGCGGTTCGCCGCGGCGGCGGGGGTGATGCCGCTGC GGCAGAACGGCGACCTGGTATGGGCGATGGCGCCACGGCGGATGGCGGCGCGCACCTTGTGCGGCGTGCTGCACGATCAT CCATCGCTGCGCAGCCGGTTTCGCGTCGCCCCCCAGTGCGCGATGCAGCAGTTCCTGCAGCAGACCGGTCAGGGCCTGGC GCAGCACGCGAGCTTCGGCCTGCAGCGCCGCTATCCCGCGCTGGCGGTTTCACCCTGCGATGTCGAGATCGGCTGGCGGA CCGGGCTCAGGCGCGCGGCGGCCGGTGCGTTGCTGGCCGCCGCCTTGCCGCTGCTGTGCGCCGTCCATTCCGGCGTGGTC ACGGCGCTGCTGTTTCTCGGCTTCATCGGATTGCGGCTGGCGGCGAGCCTGCAGCCGCGACCGCCCGCACCACGATCGGC GCGCCGGCCGGACGACGCATTGCCGATCTACACCGCGATCGCGGCGCTGTATCGCGAGGCGGCGTCGGTGGCGTCGCTGG TCGAAGCGATCGAGGCGCTGGACTATCCGCGCGAGAAACTTGACATCATTCTGGTCGTCGAGCTCGACGATCTCGCCACC CGCGCCGCGATCGCGCGGCTCGGGCCGCGACCACATCTGCGCGTGCTGATTGCGCCGGCGGTCGGGCCCAGGACCAAGCC GAAGGCGCTCAACTACGCGCTGCCGTTCGTGCGCGGCGGCATGGTGACGGTGTTCGACGCCGAGGACCGCCCGGAGCCCG ATCAGCTTCGCGCCGCGCTCGACGCCTTCGCGCGCGGCGGGCCGACGACCGGCTGCGTCCAGGCCGGCCTGTGCATCGAC AACATCACCCATAGCTGGCTGTCGCGGCTGTTCCTCGCCGAATATGCCGGCCAGTTCGAGGCGGTGCTGCCCGGCCTGAC GCGACTGGGTCTGCCGCTGCCGCTCGGCGGCTCGTCGAATCACTTCCGCACCGCCGTGCTGCGCGAGGTGGGCGGTTGGG ATGCTTACAACGTGACGGAGGATGCCGATCTCGGCTTCCGGCTGGCGCGGTTCGGCTACAGCGCCATCAGCTTCGACTCC CGCACCTTCGAAGAGGCGCCGATCGGCCTCGCCGCGTGGCTCGGCCAGCGCACCCGCTGGATGAAAGGCTGGATGCAGAC CTGGTGCGTGCACATGCGCCGGCCCCGGCTGTTCTGGCGCGACGCCGGCTGGCGCGGCGTGCTGGCGCTGAACCTGTTCG TCGGCGGCAGCGTGCTGTCCGCCCTGATCCATCCGCTGCTGCTCCTGGACCTCGCCACGACAGGGCTCGCGCTCGCGCAG GGCGAGCCGCTGTCCCCGCCTTCGCCGTGGGCCTCGCTCCACGGTCTGGCCGTCGCCGCCGGATACGTCGGCAGCGCGGT CGTCGCTGCGATCGGCCTGAAGCGGATCGGTCGGCTGCACGATGCGGCCTGGCTGCTGCTGATGCCGCTGTACTGGATCT GCCTGTCGATCGCGGCCTGGCGCGCGCTCGGCGAACTGGTGTGGAAGCCGCATCATTGGCAGAAGACCGAGCACGGCGTC GCCGCGCGTGCCGCCCCTTCGCCGAAGGCCGTCGGGAAAACGCTCGTCAGAGATAGCGCTTCAGATCCGCGGCGGCCTCT TCGGGCTTCCGCTTCATGTTGA
Upstream 100 bases:
>100_bases ATCAAGAACTCAATCCATGGTTGCATAGTCGGGATCCGCACCGGCGATCTTATAGACCATCCGGCGCGAGACGCGAGTGC CGTTTGCGTAAGGGCGTTCC
Downstream 100 bases:
>100_bases ACGGGGCGACGAACCTGCCGTCCTTGTCCATCAGATAGATCAGCGCAGTATGATCCATCGTGTAGTCGCCATCCGAGGTC GGGACCTTCTTGGCGTAGAC
Product: glycosyl transferases
Products: NA
Alternate protein names: Glycosyl Transferase; Glycosyltransferase; Glycosyl Transferase Group 2 Family Protein; Glycosyl Transferase Group 2 Family; N-Acetylglucosaminyltransferase; General Secretory System II Protein E Domain Protein; General Secretion Pathway Protein E; Family 2 Glycosyl Transferase; Glycosyl Transferases; Glycosyl Transferase Family 2 Protein; GSPII_E N-Terminal Domain Family; Glycosyltransferase Related Protein; Glucosyltransferase Family Protein; Inner Membrane Glycosyltransferase; Sensory Transduction Regulatory Protein; Cell Wall Biogenesis Glycosyltransferase; Glycosyltransferase Group 2 Family Protein; Glucosaminyltransferase
Number of amino acids: Translated: 673; Mature: 673
Protein sequence:
>673_residues MVADRAGHNVAVEQRGRHAGTSPWPGRPGFLACWNGSAVDAATVPPQSPELNCLRGVLPPNLLEAARRRAGELGTGADQV LIRWGVIDETTYLHRLARHLRIAPEDFAQVGRDDTPLCDDQMRFAAAAGVMPLRQNGDLVWAMAPRRMAARTLCGVLHDH PSLRSRFRVAPQCAMQQFLQQTGQGLAQHASFGLQRRYPALAVSPCDVEIGWRTGLRRAAAGALLAAALPLLCAVHSGVV TALLFLGFIGLRLAASLQPRPPAPRSARRPDDALPIYTAIAALYREAASVASLVEAIEALDYPREKLDIILVVELDDLAT RAAIARLGPRPHLRVLIAPAVGPRTKPKALNYALPFVRGGMVTVFDAEDRPEPDQLRAALDAFARGGPTTGCVQAGLCID NITHSWLSRLFLAEYAGQFEAVLPGLTRLGLPLPLGGSSNHFRTAVLREVGGWDAYNVTEDADLGFRLARFGYSAISFDS RTFEEAPIGLAAWLGQRTRWMKGWMQTWCVHMRRPRLFWRDAGWRGVLALNLFVGGSVLSALIHPLLLLDLATTGLALAQ GEPLSPPSPWASLHGLAVAAGYVGSAVVAAIGLKRIGRLHDAAWLLLMPLYWICLSIAAWRALGELVWKPHHWQKTEHGV AARAAPSPKAVGKTLVRDSASDPRRPLRASASC
Sequences:
>Translated_673_residues MVADRAGHNVAVEQRGRHAGTSPWPGRPGFLACWNGSAVDAATVPPQSPELNCLRGVLPPNLLEAARRRAGELGTGADQV LIRWGVIDETTYLHRLARHLRIAPEDFAQVGRDDTPLCDDQMRFAAAAGVMPLRQNGDLVWAMAPRRMAARTLCGVLHDH PSLRSRFRVAPQCAMQQFLQQTGQGLAQHASFGLQRRYPALAVSPCDVEIGWRTGLRRAAAGALLAAALPLLCAVHSGVV TALLFLGFIGLRLAASLQPRPPAPRSARRPDDALPIYTAIAALYREAASVASLVEAIEALDYPREKLDIILVVELDDLAT RAAIARLGPRPHLRVLIAPAVGPRTKPKALNYALPFVRGGMVTVFDAEDRPEPDQLRAALDAFARGGPTTGCVQAGLCID NITHSWLSRLFLAEYAGQFEAVLPGLTRLGLPLPLGGSSNHFRTAVLREVGGWDAYNVTEDADLGFRLARFGYSAISFDS RTFEEAPIGLAAWLGQRTRWMKGWMQTWCVHMRRPRLFWRDAGWRGVLALNLFVGGSVLSALIHPLLLLDLATTGLALAQ GEPLSPPSPWASLHGLAVAAGYVGSAVVAAIGLKRIGRLHDAAWLLLMPLYWICLSIAAWRALGELVWKPHHWQKTEHGV AARAAPSPKAVGKTLVRDSASDPRRPLRASASC >Mature_673_residues MVADRAGHNVAVEQRGRHAGTSPWPGRPGFLACWNGSAVDAATVPPQSPELNCLRGVLPPNLLEAARRRAGELGTGADQV LIRWGVIDETTYLHRLARHLRIAPEDFAQVGRDDTPLCDDQMRFAAAAGVMPLRQNGDLVWAMAPRRMAARTLCGVLHDH PSLRSRFRVAPQCAMQQFLQQTGQGLAQHASFGLQRRYPALAVSPCDVEIGWRTGLRRAAAGALLAAALPLLCAVHSGVV TALLFLGFIGLRLAASLQPRPPAPRSARRPDDALPIYTAIAALYREAASVASLVEAIEALDYPREKLDIILVVELDDLAT RAAIARLGPRPHLRVLIAPAVGPRTKPKALNYALPFVRGGMVTVFDAEDRPEPDQLRAALDAFARGGPTTGCVQAGLCID NITHSWLSRLFLAEYAGQFEAVLPGLTRLGLPLPLGGSSNHFRTAVLREVGGWDAYNVTEDADLGFRLARFGYSAISFDS RTFEEAPIGLAAWLGQRTRWMKGWMQTWCVHMRRPRLFWRDAGWRGVLALNLFVGGSVLSALIHPLLLLDLATTGLALAQ GEPLSPPSPWASLHGLAVAAGYVGSAVVAAIGLKRIGRLHDAAWLLLMPLYWICLSIAAWRALGELVWKPHHWQKTEHGV AARAAPSPKAVGKTLVRDSASDPRRPLRASASC
Specific function: Unknown
COG id: COG1215
COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72876; Mature: 72876
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVADRAGHNVAVEQRGRHAGTSPWPGRPGFLACWNGSAVDAATVPPQSPELNCLRGVLPP CCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHCCCCH NLLEAARRRAGELGTGADQVLIRWGVIDETTYLHRLARHLRIAPEDFAQVGRDDTPLCDD HHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCH QMRFAAAAGVMPLRQNGDLVWAMAPRRMAARTLCGVLHDHPSLRSRFRVAPQCAMQQFLQ HHHHHHHHCCCEECCCCCEEEEECCHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHH QTGQGLAQHASFGLQRRYPALAVSPCDVEIGWRTGLRRAAAGALLAAALPLLCAVHSGVV HHHHHHHHHHHHHHHHCCCCEEECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TALLFLGFIGLRLAASLQPRPPAPRSARRPDDALPIYTAIAALYREAASVASLVEAIEAL HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH DYPREKLDIILVVELDDLATRAAIARLGPRPHLRVLIAPAVGPRTKPKALNYALPFVRGG CCCCCCCCEEEEEECHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCC MVTVFDAEDRPEPDQLRAALDAFARGGPTTGCVQAGLCIDNITHSWLSRLFLAEYAGQFE EEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHH AVLPGLTRLGLPLPLGGSSNHFRTAVLREVGGWDAYNVTEDADLGFRLARFGYSAISFDS HHHCCHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCHHHCCCC RTFEEAPIGLAAWLGQRTRWMKGWMQTWCVHMRRPRLFWRDAGWRGVLALNLFVGGSVLS CCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEHHHHHHHHH ALIHPLLLLDLATTGLALAQGEPLSPPSPWASLHGLAVAAGYVGSAVVAAIGLKRIGRLH HHHHHHHHHHHHHHCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DAAWLLLMPLYWICLSIAAWRALGELVWKPHHWQKTEHGVAARAAPSPKAVGKTLVRDSA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC SDPRRPLRASASC CCCCCCCCCCCCC >Mature Secondary Structure MVADRAGHNVAVEQRGRHAGTSPWPGRPGFLACWNGSAVDAATVPPQSPELNCLRGVLPP CCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHCCCCH NLLEAARRRAGELGTGADQVLIRWGVIDETTYLHRLARHLRIAPEDFAQVGRDDTPLCDD HHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCH QMRFAAAAGVMPLRQNGDLVWAMAPRRMAARTLCGVLHDHPSLRSRFRVAPQCAMQQFLQ HHHHHHHHCCCEECCCCCEEEEECCHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHH QTGQGLAQHASFGLQRRYPALAVSPCDVEIGWRTGLRRAAAGALLAAALPLLCAVHSGVV HHHHHHHHHHHHHHHHCCCCEEECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TALLFLGFIGLRLAASLQPRPPAPRSARRPDDALPIYTAIAALYREAASVASLVEAIEAL HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH DYPREKLDIILVVELDDLATRAAIARLGPRPHLRVLIAPAVGPRTKPKALNYALPFVRGG CCCCCCCCEEEEEECHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCC MVTVFDAEDRPEPDQLRAALDAFARGGPTTGCVQAGLCIDNITHSWLSRLFLAEYAGQFE EEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHH AVLPGLTRLGLPLPLGGSSNHFRTAVLREVGGWDAYNVTEDADLGFRLARFGYSAISFDS HHHCCHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCHHHCCCC RTFEEAPIGLAAWLGQRTRWMKGWMQTWCVHMRRPRLFWRDAGWRGVLALNLFVGGSVLS CCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEHHHHHHHHH ALIHPLLLLDLATTGLALAQGEPLSPPSPWASLHGLAVAAGYVGSAVVAAIGLKRIGRLH HHHHHHHHHHHHHHCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DAAWLLLMPLYWICLSIAAWRALGELVWKPHHWQKTEHGVAARAAPSPKAVGKTLVRDSA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC SDPRRPLRASASC CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA