| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86748000
Identifier: 86748000
GI number: 86748000
Start: 1001191
End: 1002105
Strand: Reverse
Name: 86748000
Synonym: RPB_0874
Alternate gene names: NA
Gene position: 1002105-1001191 (Counterclockwise)
Preceding gene: 86748001
Following gene: 86747999
Centisome position: 18.8
GC content: 65.9
Gene sequence:
>915_bases ATGACCTTCGAAAAGACCCCCGGCTGGCTGGACTGGTACGCAAATCCGTCGAAGCCGCGGTTCAAGGTGCCGGCGGGCTC CGTCGATGCGCATTGCCATGTGTTCGGGCCGGGCGCGGAATTTCCGTTCGCGCCGGAGCGCAAATACACGCCGTGCGACG CGTCCAAGCAGCAGCTTTATGCGCTGCGCGACCATCTCGGCTTCGCCCGCAACGTCGTCGTGCAGGCGACCTGCCACGGC GCCGACAACCGGGCGATGGTCGACGCGCTGGTCCATTCGAACGGCCGCGCGCGCGGCGTCGCCACCGTCAAGCGCAGCGT CAGCGACGCCGAACTGCAGGCGATGCACGATTCCGGCGTGCGCGGCGTGCGCTTCAATTTCGTCAAGCGGCTGGTCGACT TCACCCCGAAGGACGAGCTGGTCGAGATCGCCGAGCGGATCAAGACGCTCGGCTGGCACGTGGTGATCTATTTCGAGGCG GTCGATCTGCCTGAGCTGTGGGACTTCTTCACCGCGCTGCCGACCACCATCGTGGTCGACCACATGGGCCGGCCGGATGT CGGCAAGCCGGTCGACGGGCCCGAATTCGAGCTGTTCGTCCGTTTCATGCGCGAGCATTCCAACGTCTGGTCGAAGGTGA GCTGCCCGGAGCGGCTGTCGGTGTCGGGCCCACCGGCTTTGCACGGCGAACAGCACGCCTATCGCGATGTGGTGCCGTTC GCCCGCCGCATCGTCGAGAGCTTCCCGGACCGCGTGCTGTGGGGAACCGACTGGCCGCATCCGAACCTGAAGGACCACAT GCCCGACGACGGCCTGCTGGTCGATTTCATCCCGCACATCGCGCCGACCGCGGAACTGCAACGCAAACTGCTGGTCGACA ACCCGATGCGGCTATACTGGCCGGAGGAGACATGA
Upstream 100 bases:
>100_bases CACCCCCGACCCCTCCCCGCAAGGGGGAGGGGAGAAGTAAAGAGCTCCGTTCTGAACCACGCGCTGACTTCAATGAGCAG CAGATACAAGAGTAACCTGA
Downstream 100 bases:
>100_bases TCCGACCGTCCTGGCAACGCGCACGAACCTCACCTCTCCCCGCGTGCAGGGAGAGGTCGACCGGGTTCGCGCAGCGAGGC CGGTCGGGTGAGGGGGCGTC
Product: amidohydrolase 2
Products: NA
Alternate protein names: 2-Pyrone-4 6-Dicarboxylic Acid Hydrolase; Amidohydrolase; Dicarboxylic Acid Hydrolase; 2-Pyrone-4 6-Dicarbaxylate Hydrolase; Metal-Dependent Hydrolase; Amidohydrolase Family Protein; 2-Pyrone-4 6-Dicarboxylate Hydrolase; 2-Pyrone-4 6-Dicarboxylate Lactonase; Hydrolase Amidohydrolase 2 Motif; Metal-Dependent Hydrolase Of TIM-Barrel Fold; Transcriptional Regulator GntR; Aminohydrolase; Metal-Dependent Transmembrane Hydrolase; Metal-Dependent Hydrolase Protein; Metal-Dependent Hydrolase Of TIM-Barrel Fold Family; Amidohydrolase 2 Family; Amidohydrolase Family; Exported Protein
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MTFEKTPGWLDWYANPSKPRFKVPAGSVDAHCHVFGPGAEFPFAPERKYTPCDASKQQLYALRDHLGFARNVVVQATCHG ADNRAMVDALVHSNGRARGVATVKRSVSDAELQAMHDSGVRGVRFNFVKRLVDFTPKDELVEIAERIKTLGWHVVIYFEA VDLPELWDFFTALPTTIVVDHMGRPDVGKPVDGPEFELFVRFMREHSNVWSKVSCPERLSVSGPPALHGEQHAYRDVVPF ARRIVESFPDRVLWGTDWPHPNLKDHMPDDGLLVDFIPHIAPTAELQRKLLVDNPMRLYWPEET
Sequences:
>Translated_304_residues MTFEKTPGWLDWYANPSKPRFKVPAGSVDAHCHVFGPGAEFPFAPERKYTPCDASKQQLYALRDHLGFARNVVVQATCHG ADNRAMVDALVHSNGRARGVATVKRSVSDAELQAMHDSGVRGVRFNFVKRLVDFTPKDELVEIAERIKTLGWHVVIYFEA VDLPELWDFFTALPTTIVVDHMGRPDVGKPVDGPEFELFVRFMREHSNVWSKVSCPERLSVSGPPALHGEQHAYRDVVPF ARRIVESFPDRVLWGTDWPHPNLKDHMPDDGLLVDFIPHIAPTAELQRKLLVDNPMRLYWPEET >Mature_303_residues TFEKTPGWLDWYANPSKPRFKVPAGSVDAHCHVFGPGAEFPFAPERKYTPCDASKQQLYALRDHLGFARNVVVQATCHGA DNRAMVDALVHSNGRARGVATVKRSVSDAELQAMHDSGVRGVRFNFVKRLVDFTPKDELVEIAERIKTLGWHVVIYFEAV DLPELWDFFTALPTTIVVDHMGRPDVGKPVDGPEFELFVRFMREHSNVWSKVSCPERLSVSGPPALHGEQHAYRDVVPFA RRIVESFPDRVLWGTDWPHPNLKDHMPDDGLLVDFIPHIAPTAELQRKLLVDNPMRLYWPEET
Specific function: Unknown
COG id: COG3618
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34513; Mature: 34381
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFEKTPGWLDWYANPSKPRFKVPAGSVDAHCHVFGPGAEFPFAPERKYTPCDASKQQLY CCCCCCCCCEEECCCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHH ALRDHLGFARNVVVQATCHGADNRAMVDALVHSNGRARGVATVKRSVSDAELQAMHDSGV HHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHCCC RGVRFNFVKRLVDFTPKDELVEIAERIKTLGWHVVIYFEAVDLPELWDFFTALPTTIVVD CCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEEEEEECCCHHHHHHHHHHHHHHHHC HMGRPDVGKPVDGPEFELFVRFMREHSNVWSKVSCPERLSVSGPPALHGEQHAYRDVVPF CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH ARRIVESFPDRVLWGTDWPHPNLKDHMPDDGLLVDFIPHIAPTAELQRKLLVDNPMRLYW HHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCEEEEC PEET CCCC >Mature Secondary Structure TFEKTPGWLDWYANPSKPRFKVPAGSVDAHCHVFGPGAEFPFAPERKYTPCDASKQQLY CCCCCCCCEEECCCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHH ALRDHLGFARNVVVQATCHGADNRAMVDALVHSNGRARGVATVKRSVSDAELQAMHDSGV HHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHCCC RGVRFNFVKRLVDFTPKDELVEIAERIKTLGWHVVIYFEAVDLPELWDFFTALPTTIVVD CCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEEEEEECCCHHHHHHHHHHHHHHHHC HMGRPDVGKPVDGPEFELFVRFMREHSNVWSKVSCPERLSVSGPPALHGEQHAYRDVVPF CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH ARRIVESFPDRVLWGTDWPHPNLKDHMPDDGLLVDFIPHIAPTAELQRKLLVDNPMRLYW HHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCEEEEC PEET CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA