| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86748001
Identifier: 86748001
GI number: 86748001
Start: 1002321
End: 1003250
Strand: Reverse
Name: 86748001
Synonym: RPB_0875
Alternate gene names: NA
Gene position: 1003250-1002321 (Counterclockwise)
Preceding gene: 86748002
Following gene: 86748000
Centisome position: 18.82
GC content: 68.28
Gene sequence:
>930_bases ATGAGCAGCGATCCGAAACAAGCGCGCATCGGACTGGTCGGCTATGGCGAGGTCGGCAAGATCCTCGCCGAGGATCTGCG CGCGCAGGGCGTCGCGGTCGCCGCGTTTGACGTGAAGCTGGACGACGATCGCGCGGGTCCGCTGCGCGAGCACGCGACTG CGCATGGCGTGACGCTGGCGACCTCGCATGCCGATCTCGCCGCGCGGTGTGACGTGATCATTTCGGCGGTGACGGCGAGC CAGACCGTGGCGGTGGCCGAAGCCTGTGCGGGCGCGCTCAACCAGGGTTCGTGGTTTCTCGATTTCAATTCGGCCTCGCC GGGCGCCAAGCAACGCGCCGCCGCGCTGATCGAGAGCGCTCATGGCCGCTACGTCGAAGGCGCGGTGATGACCTCGGTGC CGCCCTATCGGATCAAGGTGCCGCTGCTGCTCGGCGGTCCGCACGCCGCGGAGCTTGCGCCGCTGCTGGGTGCGCTCGGC TTCGATGCCAAGCCGGCGAGCGATCGGCTCGGTGTGGCGTCGGCGACCAAGATGTGCCGCAGCATCATGATCAAGGGGCT GGAGGCGATGGTGATCGAGAGCTTCACCACCGCGCGCGCCTACGGCGTCGAGGATGCGGTGATCGCCTCGCTGGCCGAGA CCTTTCCGTCGATCGATTGGGAGAAGCAGGGCGCCTACTTCTTCCAGCGCGTGATCGAACACGGCCGCCGCCGCGCCGAG GAAGTGCGCGAGGTCGCGCAGACCGTCCGCGAGGCCGGGCTGACGCCGTGGTCGGCGCAGGGCACGGCCGAGCGCCAAGC CTGGGTGGCGGATCTCGCGGATGAAGGTCTGTTCGGGATGCGCGGCAGCAAGGAGTTTGCGCGTAGCGCCGACTGGCGCG TCGAGGCGGATCGGATATTGGCGCAGGCGAAGGACAAGAAGAACACTTAG
Upstream 100 bases:
>100_bases AGGCCGAGAAGCGCGAAAAGCTCGCGAGCGGCGTCCTCGGCCTCGACATGTACAAGATGCGCGAGCCGCTGGAAAAGGCC GGGCTGAAGTATATCGACTG
Downstream 100 bases:
>100_bases TGCCGACGACTTGAGGCCGCAGCGCTCGTGGTTTCCCCTCCCCCTTGCGGGGAGGGTCGGCCGAGCGAAGCGGAGGCCGG GGTGGGGGTCCACGGGCACT
Product: 6-phosphogluconate dehydrogenase, NAD-binding
Products: NA
Alternate protein names: ORF260 [H]
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MSSDPKQARIGLVGYGEVGKILAEDLRAQGVAVAAFDVKLDDDRAGPLREHATAHGVTLATSHADLAARCDVIISAVTAS QTVAVAEACAGALNQGSWFLDFNSASPGAKQRAAALIESAHGRYVEGAVMTSVPPYRIKVPLLLGGPHAAELAPLLGALG FDAKPASDRLGVASATKMCRSIMIKGLEAMVIESFTTARAYGVEDAVIASLAETFPSIDWEKQGAYFFQRVIEHGRRRAE EVREVAQTVREAGLTPWSAQGTAERQAWVADLADEGLFGMRGSKEFARSADWRVEADRILAQAKDKKNT
Sequences:
>Translated_309_residues MSSDPKQARIGLVGYGEVGKILAEDLRAQGVAVAAFDVKLDDDRAGPLREHATAHGVTLATSHADLAARCDVIISAVTAS QTVAVAEACAGALNQGSWFLDFNSASPGAKQRAAALIESAHGRYVEGAVMTSVPPYRIKVPLLLGGPHAAELAPLLGALG FDAKPASDRLGVASATKMCRSIMIKGLEAMVIESFTTARAYGVEDAVIASLAETFPSIDWEKQGAYFFQRVIEHGRRRAE EVREVAQTVREAGLTPWSAQGTAERQAWVADLADEGLFGMRGSKEFARSADWRVEADRILAQAKDKKNT >Mature_308_residues SSDPKQARIGLVGYGEVGKILAEDLRAQGVAVAAFDVKLDDDRAGPLREHATAHGVTLATSHADLAARCDVIISAVTASQ TVAVAEACAGALNQGSWFLDFNSASPGAKQRAAALIESAHGRYVEGAVMTSVPPYRIKVPLLLGGPHAAELAPLLGALGF DAKPASDRLGVASATKMCRSIMIKGLEAMVIESFTTARAYGVEDAVIASLAETFPSIDWEKQGAYFFQRVIEHGRRRAEE VREVAQTVREAGLTPWSAQGTAERQAWVADLADEGLFGMRGSKEFARSADWRVEADRILAQAKDKKNT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR013328 - InterPro: IPR016040 - InterPro: IPR004455 - InterPro: IPR015814 [H]
Pfam domain/function: PF09130 DUF1932; PF03807 F420_oxidored [H]
EC number: NA
Molecular weight: Translated: 32891; Mature: 32759
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSDPKQARIGLVGYGEVGKILAEDLRAQGVAVAAFDVKLDDDRAGPLREHATAHGVTLA CCCCCCHHEEEEEECCHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCHHHHHHHCCEEEE TSHADLAARCDVIISAVTASQTVAVAEACAGALNQGSWFLDFNSASPGAKQRAAALIESA ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHH HGRYVEGAVMTSVPPYRIKVPLLLGGPHAAELAPLLGALGFDAKPASDRLGVASATKMCR CCCEECCEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH SIMIKGLEAMVIESFTTARAYGVEDAVIASLAETFPSIDWEKQGAYFFQRVIEHGRRRAE HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH EVREVAQTVREAGLTPWSAQGTAERQAWVADLADEGLFGMRGSKEFARSADWRVEADRIL HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCHHHHHH AQAKDKKNT HHHHCCCCC >Mature Secondary Structure SSDPKQARIGLVGYGEVGKILAEDLRAQGVAVAAFDVKLDDDRAGPLREHATAHGVTLA CCCCCHHEEEEEECCHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCHHHHHHHCCEEEE TSHADLAARCDVIISAVTASQTVAVAEACAGALNQGSWFLDFNSASPGAKQRAAALIESA ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHH HGRYVEGAVMTSVPPYRIKVPLLLGGPHAAELAPLLGALGFDAKPASDRLGVASATKMCR CCCEECCEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH SIMIKGLEAMVIESFTTARAYGVEDAVIASLAETFPSIDWEKQGAYFFQRVIEHGRRRAE HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH EVREVAQTVREAGLTPWSAQGTAERQAWVADLADEGLFGMRGSKEFARSADWRVEADRIL HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCHHHHHH AQAKDKKNT HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2116370 [H]