Click here to switch to the map view.

The map label for this gene is 86747972

Identifier: 86747972

GI number: 86747972

Start: 963482

End: 964288

Strand: Reverse

Name: 86747972

Synonym: RPB_0846

Alternate gene names: NA

Gene position: 964288-963482 (Counterclockwise)

Preceding gene: 86747973

Following gene: 86747970

Centisome position: 18.09

GC content: 72.12

Gene sequence:

>807_bases
TTGCGTCAAGCCTTTGAAATGCGGCGCCTTCGGCGCCCCGTGATGCTCGCGGCGGCGCTCGCTGTGGCAACCCCCGTGGC
GCTGAGCCCGGTGCCCGCCGCAGCGCAGAACATCCTCGACATGCTGTTCGGCAGCGGCGGCCCGCAGCGGCCGCAGCAGC
GCGGCGCGCCGGCGCAGGCCAATTTCTTCGCCGATCCGTTCGGGCTGAACCAGCAGGCCGCACCGCCACCGCCGCCGCGC
CCGGTCGCCTCCGGCGGCGGACCGGCGTTCTGCGTGCGGCCGTGCGACGGCAAGTATTTCGCGCTGCAGGCGCGCGGCGG
CATGACGGCGGCGCAGATGTGCAACGCGTTCTGCCCGGCCGGCAACGCCAAGGTCTACTATGGCAGCAATATCGACTACG
CGACCGCGGCGGGCGGCCAGCGCTATGCCGACAGCGAAAACGCCTTCGCCTATCGCAAGGCGCTGAAGGCGGATTGCACC
TGCAACGGCCGCGATCCCGCCGGCCTCGCGCAGATCGACCTGTCGCAGGACACCTCGCTGCGCGCCGGCGACATCGTCGC
GACCGCGACCGGCCTCGCCGCCTATACGGGCGTCCGGCTCGGCGCCGAGCAGACTCCGGATTTCACCCCGGTGGCGGATT
ATCCCGGCCTGACCGCGCAGCTCCGCGCCCGGCTCGGCGAAATGAAGGTGGCGCCGGTGAACGATCAGTTCGTCGAAACG
CCACTACCGATCGCCCGCGACGTGTCGCTGCCGGTCCCGGCGGCAGCGCAACCCGCGGTGCGCGGGCGCCGCGCGGGGGT
GGATTGA

Upstream 100 bases:

>100_bases
ACACCCCGGCGCCCCGAAGAAACCGCGCGTTTACCATCCCGCACTAAAGTGAACGGGTCGCGGCCAGGCCGCAGCACGAT
CGCGTCGGGTGGAGTGAGCG

Downstream 100 bases:

>100_bases
GGCACAACCGTCATTCCGGGGCGCCGCGCAGCGGCGAGCCCGGAATCTCGACATTCGGGGCGCCCGGCGGTCCCGCGCAG
AACAGCTCGCGATTCCGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MRQAFEMRRLRRPVMLAAALAVATPVALSPVPAAAQNILDMLFGSGGPQRPQQRGAPAQANFFADPFGLNQQAAPPPPPR
PVASGGGPAFCVRPCDGKYFALQARGGMTAAQMCNAFCPAGNAKVYYGSNIDYATAAGGQRYADSENAFAYRKALKADCT
CNGRDPAGLAQIDLSQDTSLRAGDIVATATGLAAYTGVRLGAEQTPDFTPVADYPGLTAQLRARLGEMKVAPVNDQFVET
PLPIARDVSLPVPAAAQPAVRGRRAGVD

Sequences:

>Translated_268_residues
MRQAFEMRRLRRPVMLAAALAVATPVALSPVPAAAQNILDMLFGSGGPQRPQQRGAPAQANFFADPFGLNQQAAPPPPPR
PVASGGGPAFCVRPCDGKYFALQARGGMTAAQMCNAFCPAGNAKVYYGSNIDYATAAGGQRYADSENAFAYRKALKADCT
CNGRDPAGLAQIDLSQDTSLRAGDIVATATGLAAYTGVRLGAEQTPDFTPVADYPGLTAQLRARLGEMKVAPVNDQFVET
PLPIARDVSLPVPAAAQPAVRGRRAGVD
>Mature_268_residues
MRQAFEMRRLRRPVMLAAALAVATPVALSPVPAAAQNILDMLFGSGGPQRPQQRGAPAQANFFADPFGLNQQAAPPPPPR
PVASGGGPAFCVRPCDGKYFALQARGGMTAAQMCNAFCPAGNAKVYYGSNIDYATAAGGQRYADSENAFAYRKALKADCT
CNGRDPAGLAQIDLSQDTSLRAGDIVATATGLAAYTGVRLGAEQTPDFTPVADYPGLTAQLRARLGEMKVAPVNDQFVET
PLPIARDVSLPVPAAAQPAVRGRRAGVD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27962; Mature: 27962

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQAFEMRRLRRPVMLAAALAVATPVALSPVPAAAQNILDMLFGSGGPQRPQQRGAPAQA
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHCCCCCCC
NFFADPFGLNQQAAPPPPPRPVASGGGPAFCVRPCDGKYFALQARGGMTAAQMCNAFCPA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHCCC
GNAKVYYGSNIDYATAAGGQRYADSENAFAYRKALKADCTCNGRDPAGLAQIDLSQDTSL
CCCEEEECCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCC
RAGDIVATATGLAAYTGVRLGAEQTPDFTPVADYPGLTAQLRARLGEMKVAPVNDQFVET
CCCCEEEHHHHHHHHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHCCEEECCCCCHHHCC
PLPIARDVSLPVPAAAQPAVRGRRAGVD
CCCCCCCCCCCCCCCCCCHHCCCCCCCC
>Mature Secondary Structure
MRQAFEMRRLRRPVMLAAALAVATPVALSPVPAAAQNILDMLFGSGGPQRPQQRGAPAQA
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHCCCCCCC
NFFADPFGLNQQAAPPPPPRPVASGGGPAFCVRPCDGKYFALQARGGMTAAQMCNAFCPA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHCCC
GNAKVYYGSNIDYATAAGGQRYADSENAFAYRKALKADCTCNGRDPAGLAQIDLSQDTSL
CCCEEEECCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCC
RAGDIVATATGLAAYTGVRLGAEQTPDFTPVADYPGLTAQLRARLGEMKVAPVNDQFVET
CCCCEEEHHHHHHHHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHCCEEECCCCCHHHCC
PLPIARDVSLPVPAAAQPAVRGRRAGVD
CCCCCCCCCCCCCCCCCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA