| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is glgP [H]
Identifier: 86747970
GI number: 86747970
Start: 959970
End: 962480
Strand: Reverse
Name: glgP [H]
Synonym: RPB_0844
Alternate gene names: 86747970
Gene position: 962480-959970 (Counterclockwise)
Preceding gene: 86747972
Following gene: 86747969
Centisome position: 18.05
GC content: 66.39
Gene sequence:
>2511_bases TTGCCCGCGCAGCCCGTGCCAGAGAAATTTCAGCAGCCGCCGATCGACGAACTGGCGCTGTCCGAGATCAAGAGCGCCAT TCTGGCCAAGCTGACGCTTGCGATCGGCAAAGAGGCGACGCAGGCGACCAAGCACGATTGGTACAAGGCCGCGGCGCTGG CGCTGCGCGACCGCATCGTGCACCGCTGGCTGGTGTCCGAGAAGGAGAGCTACGACGCCGGCCGCAAGCGGGTGTATTAC CTCTCGCTGGAATTCCTGATCGGCCGGCTGTTCACCGACGCGCTGAACAATATGGGCCTGCTGGCGCAATACGGCGCCGC GCTGGGCGACCTCGGCGTCGGCCTCAACGATTTGCGCAAATGCGAACCGGACGCGGCGCTCGGCAATGGCGGCCTCGGCC GGCTCGCCGCCTGCTTCATGGAAAGCATGGCGACGCTGGAGATCCCGGCGATCGGCTACGGCATCCGCTACGATTACGGC CTGTTCCGGCAGATCATCAATCACGGCTGGCAGCAGGAATTCCCGGACGAGTGGCTGTCGTTCGGCAACCCGTGGGAGCT GCAGCGGCCCGAGGTGGTGTATCAGGTGAAGTTCGGCGGTAGCGTCGAGCAGGTCACCGACCCCAAGGGCGTGACGCGCG CGGTCTGGACGCCGATCGAAACCGTGCAGGCGATGGCCTACGACACGCCGATCGTCGGCTGGCGCGGCGAGCACGTCAAC GCGCTGCGGCTGTGGTCGGCGCGGGCGCCCGATCCGATGCTGATCGACGTCTTCAACACCGGCGACTATCTCGGCGCCAC CGCCCACGAGGCGCGCGCCGAGGCGATCTGCAAATTCCTCTATCCCAACGACGAGAGCCCCGCCGGGCGCGAATTGCGGC TGCGGCAGGAATATTTCTTCGTCTCCGCCTCGCTGCAGGACCTGATCAAGCGGCATCTGGATTCGGACGGCCAGATCCGC AACCTCGCCAAGAAGGCGGCGATCCAGCTCAACGACACCCATCCCAGCCTCGCCGTCACCGAGCTGATGCGGCTGTTGAT CGACGTCCATCACCTGCGCTGGGACGACGCCTGGCAGATCACCACCGCGACGCTGAGCTACACCAATCACACGCTGCTGC CCGAGGCGCTGGAGACCTGGCCGCTTGATCTGTTCGAGCGCACGCTGCCGCGGCATCTGCAGATCATCTACCGCATCAAC GAGGCGCATCTGGCGCTCGCCGAGCAGCGCTGCCCCGGCGATATCGAGTTCCGCGCGTCGGTGTCGCTGATCGACGAGCG GGCCGGCCGCCGGGTCCGGATGGGGCACCTCGCCTTCATCGGCTCGCACCGCATCAACGGCGTCTCGGCGATGCATTCCG ACCTGATGAAGGAGACCGTGTTCCACGATCTCAATCATCTCTATCCGGACCGCATCACCAACAAGACCAACGGCATCACC TTCCGGCGCTGGCTGACGCTGGCCAATCCGGGGCTGACCGATCTGGTGCGCTCGGCCTGCGGCGACGAGGTGCTGGACGA TCCGACGAGGCTCGACCGCCTCGAAGCCTTCGCCGGCGACAGCGCGTTCCAGCAGCAGTTCCGAACCGTCAAGCACCGCA ACAAGATCGCGCTGGCGCGGCTGATCAGCGAGCGCAACGGCATCCGGGTCGATCCGGGCGCGCTGTTCGACGTCCAGATC AAGCGCATCCACGAATACAAGCGGCAGCTTCTCAACGTGCTGGAGACCGTCGCGCTGTATCACGCGATCAAGGACGAGCC GAACCGCGACTGGGTGCCGCGCGTCAAGATCTTCGCCGGCAAGGCCGCGGCGAGCTATCGCTACGCCAAGCTGATCATCA AGCTGATCAACGACGTCGCCGAGGTCGTCAACAACGACGCCTCGATCGGCGGCAAGCTGAAGGTGGTGTTCCTCGCCGAC TACAATGTCAGCCTGGCCGAAGTGATCATTCCCGCCGCCGATCTGTCCGAGCAGATTTCGACCGCCGGCATGGAAGCGTC CGGCACCGGCAACATGAAACTGGCGCTCAACGGCGCGCTGACGATCGGCACGCTCGACGGCGCCAATATCGAGATCCGCG ATCACGTCGGCGCCGAGAATATCGCGATCTTCGGCATGGAAGCGCTCGAAGTGGTGGCGCGGCGCGCCCAGGGCCTCGAC GCCAACGACGTCATCACCCGCTCGCAGCCGCTCGCCCGCGCCATCCGGGCGATCGACGCAGGCGCGTTCTCGCCCGACGA TCCGGCGCGGTTCGCCTCGGTGGCGCACGCGCTGCGGCACCTCGACCACTACATGGTCAGCGCCGATTTCGACAGCTACT ACGAGGCCCAGCGCGGCATCGACGCACGCTGGGCCGCCGGCCCCGCCTGGACCCGGGCCGGCATCCTCAACGTCGCGCGG ATGGCCTGGTTCTCGTCGGACCGCACCATCCGCGAATACGCCGAGGACATCTGGGACGTTCCGACACGGCACGCGACGCA ACCCCCGCCGGCACGGCTGGCGAAGGGGTAG
Upstream 100 bases:
>100_bases AACCAAGGCACAGCGCCGCAACGATGCACTCGTCATGGGTTTCGGTCCGGCGCTAATGTTTGTATGGTTTGAACTCATAA AACCCTTGTAGGATCATCAT
Downstream 100 bases:
>100_bases CGGGGCCGAGCGGAGGTCGCAGCGCTCGCGCCAGCGCACAGCGCAACCTCTCCCGCTTGCGGGAGAGGTCGGATCGCGCA GCGATCCGGGTGAGGGAAGC
Product: glycogen/starch/alpha-glucan phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 836; Mature: 835
Protein sequence:
>836_residues MPAQPVPEKFQQPPIDELALSEIKSAILAKLTLAIGKEATQATKHDWYKAAALALRDRIVHRWLVSEKESYDAGRKRVYY LSLEFLIGRLFTDALNNMGLLAQYGAALGDLGVGLNDLRKCEPDAALGNGGLGRLAACFMESMATLEIPAIGYGIRYDYG LFRQIINHGWQQEFPDEWLSFGNPWELQRPEVVYQVKFGGSVEQVTDPKGVTRAVWTPIETVQAMAYDTPIVGWRGEHVN ALRLWSARAPDPMLIDVFNTGDYLGATAHEARAEAICKFLYPNDESPAGRELRLRQEYFFVSASLQDLIKRHLDSDGQIR NLAKKAAIQLNDTHPSLAVTELMRLLIDVHHLRWDDAWQITTATLSYTNHTLLPEALETWPLDLFERTLPRHLQIIYRIN EAHLALAEQRCPGDIEFRASVSLIDERAGRRVRMGHLAFIGSHRINGVSAMHSDLMKETVFHDLNHLYPDRITNKTNGIT FRRWLTLANPGLTDLVRSACGDEVLDDPTRLDRLEAFAGDSAFQQQFRTVKHRNKIALARLISERNGIRVDPGALFDVQI KRIHEYKRQLLNVLETVALYHAIKDEPNRDWVPRVKIFAGKAAASYRYAKLIIKLINDVAEVVNNDASIGGKLKVVFLAD YNVSLAEVIIPAADLSEQISTAGMEASGTGNMKLALNGALTIGTLDGANIEIRDHVGAENIAIFGMEALEVVARRAQGLD ANDVITRSQPLARAIRAIDAGAFSPDDPARFASVAHALRHLDHYMVSADFDSYYEAQRGIDARWAAGPAWTRAGILNVAR MAWFSSDRTIREYAEDIWDVPTRHATQPPPARLAKG
Sequences:
>Translated_836_residues MPAQPVPEKFQQPPIDELALSEIKSAILAKLTLAIGKEATQATKHDWYKAAALALRDRIVHRWLVSEKESYDAGRKRVYY LSLEFLIGRLFTDALNNMGLLAQYGAALGDLGVGLNDLRKCEPDAALGNGGLGRLAACFMESMATLEIPAIGYGIRYDYG LFRQIINHGWQQEFPDEWLSFGNPWELQRPEVVYQVKFGGSVEQVTDPKGVTRAVWTPIETVQAMAYDTPIVGWRGEHVN ALRLWSARAPDPMLIDVFNTGDYLGATAHEARAEAICKFLYPNDESPAGRELRLRQEYFFVSASLQDLIKRHLDSDGQIR NLAKKAAIQLNDTHPSLAVTELMRLLIDVHHLRWDDAWQITTATLSYTNHTLLPEALETWPLDLFERTLPRHLQIIYRIN EAHLALAEQRCPGDIEFRASVSLIDERAGRRVRMGHLAFIGSHRINGVSAMHSDLMKETVFHDLNHLYPDRITNKTNGIT FRRWLTLANPGLTDLVRSACGDEVLDDPTRLDRLEAFAGDSAFQQQFRTVKHRNKIALARLISERNGIRVDPGALFDVQI KRIHEYKRQLLNVLETVALYHAIKDEPNRDWVPRVKIFAGKAAASYRYAKLIIKLINDVAEVVNNDASIGGKLKVVFLAD YNVSLAEVIIPAADLSEQISTAGMEASGTGNMKLALNGALTIGTLDGANIEIRDHVGAENIAIFGMEALEVVARRAQGLD ANDVITRSQPLARAIRAIDAGAFSPDDPARFASVAHALRHLDHYMVSADFDSYYEAQRGIDARWAAGPAWTRAGILNVAR MAWFSSDRTIREYAEDIWDVPTRHATQPPPARLAKG >Mature_835_residues PAQPVPEKFQQPPIDELALSEIKSAILAKLTLAIGKEATQATKHDWYKAAALALRDRIVHRWLVSEKESYDAGRKRVYYL SLEFLIGRLFTDALNNMGLLAQYGAALGDLGVGLNDLRKCEPDAALGNGGLGRLAACFMESMATLEIPAIGYGIRYDYGL FRQIINHGWQQEFPDEWLSFGNPWELQRPEVVYQVKFGGSVEQVTDPKGVTRAVWTPIETVQAMAYDTPIVGWRGEHVNA LRLWSARAPDPMLIDVFNTGDYLGATAHEARAEAICKFLYPNDESPAGRELRLRQEYFFVSASLQDLIKRHLDSDGQIRN LAKKAAIQLNDTHPSLAVTELMRLLIDVHHLRWDDAWQITTATLSYTNHTLLPEALETWPLDLFERTLPRHLQIIYRINE AHLALAEQRCPGDIEFRASVSLIDERAGRRVRMGHLAFIGSHRINGVSAMHSDLMKETVFHDLNHLYPDRITNKTNGITF RRWLTLANPGLTDLVRSACGDEVLDDPTRLDRLEAFAGDSAFQQQFRTVKHRNKIALARLISERNGIRVDPGALFDVQIK RIHEYKRQLLNVLETVALYHAIKDEPNRDWVPRVKIFAGKAAASYRYAKLIIKLINDVAEVVNNDASIGGKLKVVFLADY NVSLAEVIIPAADLSEQISTAGMEASGTGNMKLALNGALTIGTLDGANIEIRDHVGAENIAIFGMEALEVVARRAQGLDA NDVITRSQPLARAIRAIDAGAFSPDDPARFASVAHALRHLDHYMVSADFDSYYEAQRGIDARWAAGPAWTRAGILNVARM AWFSSDRTIREYAEDIWDVPTRHATQPPPARLAKG
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI71037379, Length=809, Percent_Identity=47.5896168108776, Blast_Score=748, Evalue=0.0, Organism=Homo sapiens, GI21361370, Length=835, Percent_Identity=46.5868263473054, Blast_Score=740, Evalue=0.0, Organism=Homo sapiens, GI5032009, Length=835, Percent_Identity=46.1077844311377, Blast_Score=734, Evalue=0.0, Organism=Homo sapiens, GI255653002, Length=809, Percent_Identity=45.7354758961681, Blast_Score=702, Evalue=0.0, Organism=Homo sapiens, GI257900462, Length=673, Percent_Identity=46.9539375928678, Blast_Score=635, Evalue=0.0, Organism=Escherichia coli, GI2367228, Length=808, Percent_Identity=49.1336633663366, Blast_Score=777, Evalue=0.0, Organism=Escherichia coli, GI48994936, Length=748, Percent_Identity=47.0588235294118, Blast_Score=669, Evalue=0.0, Organism=Caenorhabditis elegans, GI17564550, Length=822, Percent_Identity=48.7834549878346, Blast_Score=785, Evalue=0.0, Organism=Caenorhabditis elegans, GI32566204, Length=822, Percent_Identity=48.7834549878346, Blast_Score=784, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6325418, Length=812, Percent_Identity=45.4433497536946, Blast_Score=650, Evalue=0.0, Organism=Drosophila melanogaster, GI78706832, Length=822, Percent_Identity=47.6885644768856, Blast_Score=756, Evalue=0.0, Organism=Drosophila melanogaster, GI24581010, Length=822, Percent_Identity=47.6885644768856, Blast_Score=756, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011833 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 93447; Mature: 93315
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: PS00102 PHOSPHORYLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAQPVPEKFQQPPIDELALSEIKSAILAKLTLAIGKEATQATKHDWYKAAALALRDRIV CCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH HRWLVSEKESYDAGRKRVYYLSLEFLIGRLFTDALNNMGLLAQYGAALGDLGVGLNDLRK HHHHHHCCHHCCCCCCEEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHH CEPDAALGNGGLGRLAACFMESMATLEIPAIGYGIRYDYGLFRQIINHGWQQEFPDEWLS CCCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHC FGNPWELQRPEVVYQVKFGGSVEQVTDPKGVTRAVWTPIETVQAMAYDTPIVGWRGEHVN CCCCCCCCCCCEEEEEEECCCHHHCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCCCCCCC ALRLWSARAPDPMLIDVFNTGDYLGATAHEARAEAICKFLYPNDESPAGRELRLRQEYFF CEEEECCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHEEHHHHHE VSASLQDLIKRHLDSDGQIRNLAKKAAIQLNDTHPSLAVTELMRLLIDVHHLRWDDAWQI EHHHHHHHHHHHCCCCCHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEE TTATLSYTNHTLLPEALETWPLDLFERTLPRHLQIIYRINEAHLALAEQRCPGDIEFRAS EEEEEECCCCCCCHHHHHHCCHHHHHHHHHHHEEEHEEECHHHHHHHHHCCCCCEEEEHH VSLIDERAGRRVRMGHLAFIGSHRINGVSAMHSDLMKETVFHDLNHLYPDRITNKTNGIT HHHHHHHCCCEEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEE FRRWLTLANPGLTDLVRSACGDEVLDDPTRLDRLEAFAGDSAFQQQFRTVKHRNKIALAR EEHEEECCCCCHHHHHHHHCCCHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LISERNGIRVDPGALFDVQIKRIHEYKRQLLNVLETVALYHAIKDEPNRDWVPRVKIFAG HHHHCCCCEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEC KAAASYRYAKLIIKLINDVAEVVNNDASIGGKLKVVFLADYNVSLAEVIIPAADLSEQIS CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHCHHHHHHHHH TAGMEASGTGNMKLALNGALTIGTLDGANIEIRDHVGAENIAIFGMEALEVVARRAQGLD HCCCCCCCCCCEEEEEECEEEEEECCCCCEEEECCCCCCCEEEECHHHHHHHHHHHCCCC ANDVITRSQPLARAIRAIDAGAFSPDDPARFASVAHALRHLDHYMVSADFDSYYEAQRGI HHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC DARWAAGPAWTRAGILNVARMAWFSSDRTIREYAEDIWDVPTRHATQPPPARLAKG CCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHCCCC >Mature Secondary Structure PAQPVPEKFQQPPIDELALSEIKSAILAKLTLAIGKEATQATKHDWYKAAALALRDRIV CCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH HRWLVSEKESYDAGRKRVYYLSLEFLIGRLFTDALNNMGLLAQYGAALGDLGVGLNDLRK HHHHHHCCHHCCCCCCEEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHH CEPDAALGNGGLGRLAACFMESMATLEIPAIGYGIRYDYGLFRQIINHGWQQEFPDEWLS CCCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHC FGNPWELQRPEVVYQVKFGGSVEQVTDPKGVTRAVWTPIETVQAMAYDTPIVGWRGEHVN CCCCCCCCCCCEEEEEEECCCHHHCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCCCCCCC ALRLWSARAPDPMLIDVFNTGDYLGATAHEARAEAICKFLYPNDESPAGRELRLRQEYFF CEEEECCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHEEHHHHHE VSASLQDLIKRHLDSDGQIRNLAKKAAIQLNDTHPSLAVTELMRLLIDVHHLRWDDAWQI EHHHHHHHHHHHCCCCCHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEE TTATLSYTNHTLLPEALETWPLDLFERTLPRHLQIIYRINEAHLALAEQRCPGDIEFRAS EEEEEECCCCCCCHHHHHHCCHHHHHHHHHHHEEEHEEECHHHHHHHHHCCCCCEEEEHH VSLIDERAGRRVRMGHLAFIGSHRINGVSAMHSDLMKETVFHDLNHLYPDRITNKTNGIT HHHHHHHCCCEEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEE FRRWLTLANPGLTDLVRSACGDEVLDDPTRLDRLEAFAGDSAFQQQFRTVKHRNKIALAR EEHEEECCCCCHHHHHHHHCCCHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LISERNGIRVDPGALFDVQIKRIHEYKRQLLNVLETVALYHAIKDEPNRDWVPRVKIFAG HHHHCCCCEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEC KAAASYRYAKLIIKLINDVAEVVNNDASIGGKLKVVFLADYNVSLAEVIIPAADLSEQIS CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHCHHHHHHHHH TAGMEASGTGNMKLALNGALTIGTLDGANIEIRDHVGAENIAIFGMEALEVVARRAQGLD HCCCCCCCCCCEEEEEECEEEEEECCCCCEEEECCCCCCCEEEECHHHHHHHHHHHCCCC ANDVITRSQPLARAIRAIDAGAFSPDDPARFASVAHALRHLDHYMVSADFDSYYEAQRGI HHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC DARWAAGPAWTRAGILNVARMAWFSSDRTIREYAEDIWDVPTRHATQPPPARLAKG CCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2645169; 3047129; 9278503; 2975249; 3097003 [H]