Click here to switch to the map view.

The map label for this gene is ybaA [H]

Identifier: 86747951

GI number: 86747951

Start: 939806

End: 940156

Strand: Reverse

Name: ybaA [H]

Synonym: RPB_0825

Alternate gene names: 86747951

Gene position: 940156-939806 (Counterclockwise)

Preceding gene: 86747952

Following gene: 86747948

Centisome position: 17.63

GC content: 62.39

Gene sequence:

>351_bases
ATGTCCTATGTCGACGGGTTCGTCGTGCCGGTGCCGAAAGCCAAGCTGGCGGACTACGCCAAGCTGGCGCGCAAGGCCGA
GAAGGTGTTTCGCGAGCATGGCGCGATCGACTATCGCGAGTGGGTCGCCGACGACGTGTCGCCTGGAAAGACCACCTCGT
TTCCGCGCAGCGTGAAGCTGAAGCCGAACGAGATCGTGGTGTTCTCCTACATCGTCTACAAATCGCGCAAGCAGCGCGAC
CGGGTGATGGCCAAGGCGATGCAGGACCCGCGGCTGGGCGGCCTGGACCACAACACGATGCCGTTCGACACCAAGCGGAT
GTTCTTCGGCGGCTTCAAGAAGCTGGTGTAG

Upstream 100 bases:

>100_bases
AAAAGGACCCGGCGCCGGGTTGTCGGACAGTTCTCGCTTCGATCGTCCTGCGACCGGCCGCATGCTGCTGCGGACGCAGA
CAGATCGGGGAGGAGAACGG

Downstream 100 bases:

>100_bases
GCGGAGACGCCTGACGGCGGATCAGGCGGTGATGTCGAGATTGCCGCCGATCCCGGCGCCGACATTGGCGAGCGACGACG
AACCGCCCTGCCCGATGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MSYVDGFVVPVPKAKLADYAKLARKAEKVFREHGAIDYREWVADDVSPGKTTSFPRSVKLKPNEIVVFSYIVYKSRKQRD
RVMAKAMQDPRLGGLDHNTMPFDTKRMFFGGFKKLV

Sequences:

>Translated_116_residues
MSYVDGFVVPVPKAKLADYAKLARKAEKVFREHGAIDYREWVADDVSPGKTTSFPRSVKLKPNEIVVFSYIVYKSRKQRD
RVMAKAMQDPRLGGLDHNTMPFDTKRMFFGGFKKLV
>Mature_115_residues
SYVDGFVVPVPKAKLADYAKLARKAEKVFREHGAIDYREWVADDVSPGKTTSFPRSVKLKPNEIVVFSYIVYKSRKQRDR
VMAKAMQDPRLGGLDHNTMPFDTKRMFFGGFKKLV

Specific function: Unknown

COG id: COG5507

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786661, Length=116, Percent_Identity=47.4137931034483, Blast_Score=100, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009874 [H]

Pfam domain/function: PF07237 DUF1428 [H]

EC number: NA

Molecular weight: Translated: 13318; Mature: 13186

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYVDGFVVPVPKAKLADYAKLARKAEKVFREHGAIDYREWVADDVSPGKTTSFPRSVKL
CCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCEEEE
KPNEIVVFSYIVYKSRKQRDRVMAKAMQDPRLGGLDHNTMPFDTKRMFFGGFKKLV
CCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
SYVDGFVVPVPKAKLADYAKLARKAEKVFREHGAIDYREWVADDVSPGKTTSFPRSVKL
CCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCEEEE
KPNEIVVFSYIVYKSRKQRDRVMAKAMQDPRLGGLDHNTMPFDTKRMFFGGFKKLV
CCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]