| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is ymgE [C]
Identifier: 86747687
GI number: 86747687
Start: 631683
End: 631976
Strand: Reverse
Name: ymgE [C]
Synonym: RPB_0561
Alternate gene names: 86747687
Gene position: 631976-631683 (Counterclockwise)
Preceding gene: 86747688
Following gene: 86747685
Centisome position: 11.85
GC content: 64.97
Gene sequence:
>294_bases ATGACTGGAATTCTCTGGATCATTCTGGTCGGCTTCGTCGCCGGCATCATCGCGCGGTTCCTGTCGCCCGGGCCGAACAA TCCGCAGGGCTTCCTGCTGACCACGGTGCTGGGCATCGCCGGCGCGTTTCTGGCCACCGCGATCGGTCAGATGATCGGGC ATTACGGGCCCAACCAGGGCGCCGGCTTCATCACCGCGACGATCGGCGCGGTGCTGGTGCTGTTCATCTGGAACAGGCTG GTGGCGCGGCGGGTGATTTCCGATCCGGGCAATCGCCGCTTCCTCGATCGCTGA
Upstream 100 bases:
>100_bases GCCGGACGGCCGGCTGCCGACCGAGGACGAAGCCTCGCGCTGGGTCTGATCAGCCGCGACGAACCTATCGACGCAAGCGT TTCGGAAAGGACGGTTGCCC
Downstream 100 bases:
>100_bases CAAGCAAACGGCCCGGCTCATCACCGGGCCGTTTGTTTTTGCACGGCCGATCGATCAGCCGAGATGCATCCCGGCGTCCA TCCTCACCATCTCGCCGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: Transglycosylase Associated Family Protein
Number of amino acids: Translated: 97; Mature: 96
Protein sequence:
>97_residues MTGILWIILVGFVAGIIARFLSPGPNNPQGFLLTTVLGIAGAFLATAIGQMIGHYGPNQGAGFITATIGAVLVLFIWNRL VARRVISDPGNRRFLDR
Sequences:
>Translated_97_residues MTGILWIILVGFVAGIIARFLSPGPNNPQGFLLTTVLGIAGAFLATAIGQMIGHYGPNQGAGFITATIGAVLVLFIWNRL VARRVISDPGNRRFLDR >Mature_96_residues TGILWIILVGFVAGIIARFLSPGPNNPQGFLLTTVLGIAGAFLATAIGQMIGHYGPNQGAGFITATIGAVLVLFIWNRLV ARRVISDPGNRRFLDR
Specific function: Unknown
COG id: COG2261
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10334; Mature: 10203
Theoretical pI: Translated: 12.38; Mature: 12.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGILWIILVGFVAGIIARFLSPGPNNPQGFLLTTVLGIAGAFLATAIGQMIGHYGPNQG CHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC AGFITATIGAVLVLFIWNRLVARRVISDPGNRRFLDR CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TGILWIILVGFVAGIIARFLSPGPNNPQGFLLTTVLGIAGAFLATAIGQMIGHYGPNQG HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC AGFITATIGAVLVLFIWNRLVARRVISDPGNRRFLDR CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA