| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is caiA [C]
Identifier: 86747685
GI number: 86747685
Start: 629534
End: 630601
Strand: Reverse
Name: caiA [C]
Synonym: RPB_0559
Alternate gene names: 86747685
Gene position: 630601-629534 (Counterclockwise)
Preceding gene: 86747687
Following gene: 86747684
Centisome position: 11.83
GC content: 70.69
Gene sequence:
>1068_bases GTGACGGAGACGCCCGACACTATCGTCGTCGAGACCGCGGAGAAGATCTTCGCCGATCTCGCCGACGCGCAGAGCATCAA TTCCGACAAGACCGGAAGCTGGAAAGCGCCGCTGTGGCAGGCGCTGAGCGATTCCGGATTGCCGCTGGCGTGGGTGCCGG AGGATTGCAACGGCTCCGGCGCCAGCCTCGCCGAAGGCTTCGCGGTGCTGAACGCCGCCGGCCGCGCCGGGCTCGCGGTG CCGCTGGCCGAAACGATGCTCGCCGGCTGGCTGCTGGCGCAGGGCAAGATCGCCTCGCCGGAGGGTGCGATGACGGTCGC GCCGGTGCATCCCAAGGATCGCATTGCGCTCGCCGCCGACGGCACGCTGTCGGGCCGCGCGCGCGGCGTACCGTTCGCGC AGGATGCGCGGCATATCGCGGTGCTGGCGCACAGCAACGACATCGCCGTCATCGCGCTGGTCGAGGCGGCCGCATGCCGG ATCGATCATGGCCTCGGAGTCGGCGGCGATCCGTCGGACGCGGTGACGTTCGACGGGGTGACGCCGCTGACCTTCGCGGT GGCGCCGCAAGGCTTCGACCAGACCGCGCTGCTGCTGATCGGCTGCGTGGTGCGCAGCCTGCAGATCGCCGGCGCGCTGG AGGCGCTGCTGGAGATCAGCGTGGCCTATGCCAACCAGCGCGTCGCCTTCGAAAAGCCGATCGCGAAATTCCAGGCGGTG CAGCACAACCTCGCCCGGCTCGCCGGCGAAACCTCGGCGGCGCTGGCGGCGGCGACCTCCGCGGCGGATGCGATCAGCAA CGCCACCACGTTCGACGACGCCGTGATGCTGGAAGCGGCGGCGGCGAAGATCCGCTGCGCCGAAGCGGCCGAGAAGGGCG CGGCGATCGCCCATCAGGTGTTCGGCGCGATCGGCTTCACCAGCGAGCACATCCTGCATCGCTACTCGCTGCGCGCGCTC GGCTGGCGCGACGATTTCGGCAACGAAAGCCATTGGGCGGTCGCGCTCGGCCGCATGGTGGCGGCGCGCGGCGCCGACGA TCTGTGGCCGCTGGTCGCCTCGCGCTGA
Upstream 100 bases:
>100_bases TCGCGGGCGCTTTTCCGCATCATGCCGCGCAACAACAAGCTGCACCCCGACCCGGCTTTCCTCGCCGGTTGCGTGTGAGT GTGCACAAGCGGGGAACGCC
Downstream 100 bases:
>100_bases TCGCCCCGAAACCCGACGAGACACATCATGACCGCCGCCCTCCGTTTCGATCCGATCCGCCTGCCGCCCGTCTGCGAGGA GCTGCGCCGCGAAGTGCGCG
Product: Acyl-CoA dehydrogenase-like
Products: 2,3-dehydroacyl-CoA; reduced acceptor
Alternate protein names: Acyl-CoA Dehydrogenase; Acyl-CoA Dehydrogenase Domain Protein; Acyl-CoA Dehydrogenase-Like; Acyl-CoA Dehydrogenase C-Terminal; Acyl-CoA Dehydrogenase-Like Protein; Acyl-CoA Dehydrogenase Type 2 Domain-Containing Protein; Acyl-CoA Dehydrogenase C-Terminal Domain-Containing; Acyl-CoA Dehydrogenase C-; Acyl-CoA Dehydrogenase C-Terminal Domain Protein
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MTETPDTIVVETAEKIFADLADAQSINSDKTGSWKAPLWQALSDSGLPLAWVPEDCNGSGASLAEGFAVLNAAGRAGLAV PLAETMLAGWLLAQGKIASPEGAMTVAPVHPKDRIALAADGTLSGRARGVPFAQDARHIAVLAHSNDIAVIALVEAAACR IDHGLGVGGDPSDAVTFDGVTPLTFAVAPQGFDQTALLLIGCVVRSLQIAGALEALLEISVAYANQRVAFEKPIAKFQAV QHNLARLAGETSAALAAATSAADAISNATTFDDAVMLEAAAAKIRCAEAAEKGAAIAHQVFGAIGFTSEHILHRYSLRAL GWRDDFGNESHWAVALGRMVAARGADDLWPLVASR
Sequences:
>Translated_355_residues MTETPDTIVVETAEKIFADLADAQSINSDKTGSWKAPLWQALSDSGLPLAWVPEDCNGSGASLAEGFAVLNAAGRAGLAV PLAETMLAGWLLAQGKIASPEGAMTVAPVHPKDRIALAADGTLSGRARGVPFAQDARHIAVLAHSNDIAVIALVEAAACR IDHGLGVGGDPSDAVTFDGVTPLTFAVAPQGFDQTALLLIGCVVRSLQIAGALEALLEISVAYANQRVAFEKPIAKFQAV QHNLARLAGETSAALAAATSAADAISNATTFDDAVMLEAAAAKIRCAEAAEKGAAIAHQVFGAIGFTSEHILHRYSLRAL GWRDDFGNESHWAVALGRMVAARGADDLWPLVASR >Mature_354_residues TETPDTIVVETAEKIFADLADAQSINSDKTGSWKAPLWQALSDSGLPLAWVPEDCNGSGASLAEGFAVLNAAGRAGLAVP LAETMLAGWLLAQGKIASPEGAMTVAPVHPKDRIALAADGTLSGRARGVPFAQDARHIAVLAHSNDIAVIALVEAAACRI DHGLGVGGDPSDAVTFDGVTPLTFAVAPQGFDQTALLLIGCVVRSLQIAGALEALLEISVAYANQRVAFEKPIAKFQAVQ HNLARLAGETSAALAAATSAADAISNATTFDDAVMLEAAAAKIRCAEAAEKGAAIAHQVFGAIGFTSEHILHRYSLRALG WRDDFGNESHWAVALGRMVAARGADDLWPLVASR
Specific function: Catalyzes the reduction of crotonobetainyl-CoA to gamma-butyrobetainyl-CoA. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.3.99.3
Molecular weight: Translated: 36700; Mature: 36569
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTETPDTIVVETAEKIFADLADAQSINSDKTGSWKAPLWQALSDSGLPLAWVPEDCNGSG CCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCEEEECCCCCCCCC ASLAEGFAVLNAAGRAGLAVPLAETMLAGWLLAQGKIASPEGAMTVAPVHPKDRIALAAD CHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCEEEEEC GTLSGRARGVPFAQDARHIAVLAHSNDIAVIALVEAAACRIDHGLGVGGDPSDAVTFDGV CCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEEHHHHHHHHCCCCCCCCCCCCEEECCC TPLTFAVAPQGFDQTALLLIGCVVRSLQIAGALEALLEISVAYANQRVAFEKPIAKFQAV CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH QHNLARLAGETSAALAAATSAADAISNATTFDDAVMLEAAAAKIRCAEAAEKGAAIAHQV HHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGAIGFTSEHILHRYSLRALGWRDDFGNESHWAVALGRMVAARGADDLWPLVASR HHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCC >Mature Secondary Structure TETPDTIVVETAEKIFADLADAQSINSDKTGSWKAPLWQALSDSGLPLAWVPEDCNGSG CCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCEEEECCCCCCCCC ASLAEGFAVLNAAGRAGLAVPLAETMLAGWLLAQGKIASPEGAMTVAPVHPKDRIALAAD CHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCEEEEEC GTLSGRARGVPFAQDARHIAVLAHSNDIAVIALVEAAACRIDHGLGVGGDPSDAVTFDGV CCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEEHHHHHHHHCCCCCCCCCCCCEEECCC TPLTFAVAPQGFDQTALLLIGCVVRSLQIAGALEALLEISVAYANQRVAFEKPIAKFQAV CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH QHNLARLAGETSAALAAATSAADAISNATTFDDAVMLEAAAAKIRCAEAAEKGAAIAHQV HHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGAIGFTSEHILHRYSLRALGWRDDFGNESHWAVALGRMVAARGADDLWPLVASR HHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: acyl-CoA; acceptor
Specific reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA