Click here to switch to the map view.

The map label for this gene is fdxA [H]

Identifier: 86747676

GI number: 86747676

Start: 619654

End: 619992

Strand: Direct

Name: fdxA [H]

Synonym: RPB_0550

Alternate gene names: 86747676

Gene position: 619654-619992 (Clockwise)

Preceding gene: 86747675

Following gene: 86747677

Centisome position: 11.62

GC content: 58.11

Gene sequence:

>339_bases
ATGACTTACGTCGTCACTGAAAACTGCATCAAGTGCAAATACACCGATTGCGTTGAAGTCTGCCCCGTCGATTGCTTCTA
CGAGGGCGACAACATGCTGGTCATCCATCCGGACGAATGCATCGATTGCGGCGTGTGCGAACCGGAATGCCCGGCCGATG
CGATCAAGCCGGACACCGAGCCGGGGCTCGAGAAGTGGCTCGAGCTGAATTCGGAATACGCCAAGACCTGGCCCAACCTG
ACCCAGAAGAAAGACTCGCCGGACGACGCCAAGACGTTCGACGGCGTGGAAGGCAAGTTCGAGAAGTTCTTCTCGCCGGA
GCCAGGCACCGGCGATTGA

Upstream 100 bases:

>100_bases
CCGATCTCGAGGTGCCCCGGGAATAGGCATCTTCACTTGCGGCTGTGGAAGTCCTGCGGTACGCAAACACTCAAAATTAG
AACCGTTCCGGAGCCTTCGG

Downstream 100 bases:

>100_bases
CGCGAACGTCGGTCGTATCATCGTACCGGGACGCGTTTTTCCAGTCCGGCTTAACCCTGTTGATGATGAATTGACCGGAG
CTCCGTGAGGAGCCCGCTGG

Product: 4Fe-4S ferredoxin, iron-sulfur binding

Products: NA

Alternate protein names: Ferredoxin II; FdII [H]

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MTYVVTENCIKCKYTDCVEVCPVDCFYEGDNMLVIHPDECIDCGVCEPECPADAIKPDTEPGLEKWLELNSEYAKTWPNL
TQKKDSPDDAKTFDGVEGKFEKFFSPEPGTGD

Sequences:

>Translated_112_residues
MTYVVTENCIKCKYTDCVEVCPVDCFYEGDNMLVIHPDECIDCGVCEPECPADAIKPDTEPGLEKWLELNSEYAKTWPNL
TQKKDSPDDAKTFDGVEGKFEKFFSPEPGTGD
>Mature_111_residues
TYVVTENCIKCKYTDCVEVCPVDCFYEGDNMLVIHPDECIDCGVCEPECPADAIKPDTEPGLEKWLELNSEYAKTWPNLT
QKKDSPDDAKTFDGVEGKFEKFFSPEPGTGD

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG1146

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR000813
- InterPro:   IPR022569 [H]

Pfam domain/function: PF11953 DUF3470; PF00037 Fer4 [H]

EC number: NA

Molecular weight: Translated: 12569; Mature: 12438

Theoretical pI: Translated: 3.92; Mature: 3.92

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
9.8 %Cys+Met (Translated Protein)
8.1 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
9.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYVVTENCIKCKYTDCVEVCPVDCFYEGDNMLVIHPDECIDCGVCEPECPADAIKPDTE
CEEEECCCCEEECCCCHHHHCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC
PGLEKWLELNSEYAKTWPNLTQKKDSPDDAKTFDGVEGKFEKFFSPEPGTGD
HHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCC
>Mature Secondary Structure 
TYVVTENCIKCKYTDCVEVCPVDCFYEGDNMLVIHPDECIDCGVCEPECPADAIKPDTE
EEEECCCCEEECCCCHHHHCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC
PGLEKWLELNSEYAKTWPNLTQKKDSPDDAKTFDGVEGKFEKFFSPEPGTGD
HHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2388848; 2071578; 2277040 [H]