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The map label for this gene is hslR [C]

Identifier: 86747675

GI number: 86747675

Start: 619310

End: 619579

Strand: Direct

Name: hslR [C]

Synonym: RPB_0549

Alternate gene names: 86747675

Gene position: 619310-619579 (Clockwise)

Preceding gene: 86747674

Following gene: 86747676

Centisome position: 11.62

GC content: 65.93

Gene sequence:

>270_bases
GTGGAGCGTCAGCGACTCGACAAATGGCTCTGGCATGCGCGGATCGTGCGTGCCCGCAGCACCGCGGCGGCGCTGGTCGA
AAGCGGCCATGTCCGCGTCAACGGCGTGCGGGAGAAGTCGCCCGGACACGGGATCAAGACCGGCGACGTCGTGACGATTG
CGCTGGATCGTAGCGTGCGGGTTCTGAAGGTGATTGGATTCGCCGAGCGTCGCGGCGATGCCGCGTCGGTCACTGGACTT
TATGCCGATCTCGAGGTGCCCCGGGAATAG

Upstream 100 bases:

>100_bases
CGCCCTTCGCCAAGCTCGCGGCGCTGAAGGAACAGCTCACCGCCGGCCGCAAGGAGTAAGCGTGGCTGCGCGGTCCGCGC
GGCCGAGTCGATGGTGAGGC

Downstream 100 bases:

>100_bases
GCATCTTCACTTGCGGCTGTGGAAGTCCTGCGGTACGCAAACACTCAAAATTAGAACCGTTCCGGAGCCTTCGGATGACT
TACGTCGTCACTGAAAACTG

Product: RNA-binding S4

Products: NA

Alternate protein names: Hsp15-Like Protein; S4 Domain Protein; HEAT Shock-Like Protein; S4 Domain-Containing Protein; Ribosome-Associated Heat Shock Protein; Ribosome-Associated Heat Shock S Subunit

Number of amino acids: Translated: 89; Mature: 89

Protein sequence:

>89_residues
MERQRLDKWLWHARIVRARSTAAALVESGHVRVNGVREKSPGHGIKTGDVVTIALDRSVRVLKVIGFAERRGDAASVTGL
YADLEVPRE

Sequences:

>Translated_89_residues
MERQRLDKWLWHARIVRARSTAAALVESGHVRVNGVREKSPGHGIKTGDVVTIALDRSVRVLKVIGFAERRGDAASVTGL
YADLEVPRE
>Mature_89_residues
MERQRLDKWLWHARIVRARSTAAALVESGHVRVNGVREKSPGHGIKTGDVVTIALDRSVRVLKVIGFAERRGDAASVTGL
YADLEVPRE

Specific function: Involved In The Recycling Of Free 50s Ribosomal Subunits That Still Carry A Nascent Chain. Binds RNA More Specifically Than DNA. Binds With Very High Affinity To The Free 50s Ribosomal Subunit. Does Not Bind It When It Is Part Of The 70s Ribosome. [C]

COG id: COG1188

COG function: function code J; Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9858; Mature: 9858

Theoretical pI: Translated: 11.09; Mature: 11.09

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERQRLDKWLWHARIVRARSTAAALVESGHVRVNGVREKSPGHGIKTGDVVTIALDRSVR
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCEEEEEECCCEE
VLKVIGFAERRGDAASVTGLYADLEVPRE
EHHEEHHHHCCCCCCEEEEEEEEECCCCC
>Mature Secondary Structure
MERQRLDKWLWHARIVRARSTAAALVESGHVRVNGVREKSPGHGIKTGDVVTIALDRSVR
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCEEEEEECCCEE
VLKVIGFAERRGDAASVTGLYADLEVPRE
EHHEEHHHHCCCCCCEEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA