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The map label for this gene is 86747665

Identifier: 86747665

GI number: 86747665

Start: 604294

End: 604941

Strand: Direct

Name: 86747665

Synonym: RPB_0539

Alternate gene names: NA

Gene position: 604294-604941 (Clockwise)

Preceding gene: 86747663

Following gene: 86747667

Centisome position: 11.33

GC content: 64.04

Gene sequence:

>648_bases
ATGGCAATCGACTCGTCCAAATTCTTCGACAAGATCCGCGTCAAGCCGACCAAGGCCGCGGCGGCGAAGGAGGCTGCGCG
CGAACAGGTGATCATGTGCGACGCGCCGGGCTGCGCCAATCGCGGCGCGCATCGCGCCCCGAAGGGCCGCGGGCTGGAGA
AGGATTACTGGCACTTCTGCCTGAATCACGTCCGCGAATACAATCAGGGCTACAATTTCTTCGAGGGTATGAATGCCGAC
GCGGTGGCGCGCTATCAGAAGGACGCGCTGACCGGCCATCGCCCGACCTGGAAGATGGGCCAGAACGGCGCCAAGAGCCG
GACCAAGAACCCCGAGGATCTCGCGGGCGCCGCCGATCCGTTCAACGTCATCAACGAGTTCAACGGCCGCAGCCGCTGGC
GGCGCGGGCCCGATCCGTCGGCCGAGCAGACCAAGTCGGAGCCGCGCAAGGTGTTCAACGCCGAGCGCAAGGCGCTGCAG
GTGATGGGGCTCGACAGCGACGCGACGCTCGAAGTCGTCAAGGCGAAGTACAAGGCGCTGGTCAAGCAGCATCATCCCGA
CGCCAATGGCGGCGACCGCTCGACCGAGGATCGCCTGATCGAGATCATCAAGGCGTATAATTACTTGAAGACGGTGGTGC
GGACCTGA

Upstream 100 bases:

>100_bases
CGACCGATCGTTGGTTCGCCGCCTGCTCACACCATCAACCCGGGGCTTGCTGATAATGTCAAGACTTGAAGCTCGGCCCG
AGGCGTAGTCAAAGTCACGC

Downstream 100 bases:

>100_bases
CCGCGGCGGCGGCCGGCTCGTCAGGTCGCCTGCGCCTTACCCCGCCGTCGCCGCCACAGCAGCCAGCCAGCTAGAACGAC
CACGCCGGCCACGCCCGCGA

Product: heat shock protein DnaJ-like

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MAIDSSKFFDKIRVKPTKAAAAKEAAREQVIMCDAPGCANRGAHRAPKGRGLEKDYWHFCLNHVREYNQGYNFFEGMNAD
AVARYQKDALTGHRPTWKMGQNGAKSRTKNPEDLAGAADPFNVINEFNGRSRWRRGPDPSAEQTKSEPRKVFNAERKALQ
VMGLDSDATLEVVKAKYKALVKQHHPDANGGDRSTEDRLIEIIKAYNYLKTVVRT

Sequences:

>Translated_215_residues
MAIDSSKFFDKIRVKPTKAAAAKEAAREQVIMCDAPGCANRGAHRAPKGRGLEKDYWHFCLNHVREYNQGYNFFEGMNAD
AVARYQKDALTGHRPTWKMGQNGAKSRTKNPEDLAGAADPFNVINEFNGRSRWRRGPDPSAEQTKSEPRKVFNAERKALQ
VMGLDSDATLEVVKAKYKALVKQHHPDANGGDRSTEDRLIEIIKAYNYLKTVVRT
>Mature_214_residues
AIDSSKFFDKIRVKPTKAAAAKEAAREQVIMCDAPGCANRGAHRAPKGRGLEKDYWHFCLNHVREYNQGYNFFEGMNADA
VARYQKDALTGHRPTWKMGQNGAKSRTKNPEDLAGAADPFNVINEFNGRSRWRRGPDPSAEQTKSEPRKVFNAERKALQV
MGLDSDATLEVVKAKYKALVKQHHPDANGGDRSTEDRLIEIIKAYNYLKTVVRT

Specific function: Unknown

COG id: COG2214

COG function: function code O; DnaJ-class molecular chaperone

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001623
- InterPro:   IPR015609
- InterPro:   IPR003095 [H]

Pfam domain/function: PF00226 DnaJ [H]

EC number: NA

Molecular weight: Translated: 24196; Mature: 24064

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIDSSKFFDKIRVKPTKAAAAKEAAREQVIMCDAPGCANRGAHRAPKGRGLEKDYWHFC
CCCCCHHHHHHHCCCCHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHH
LNHVREYNQGYNFFEGMNADAVARYQKDALTGHRPTWKMGQNGAKSRTKNPEDLAGAADP
HHHHHHHHCCCCHHHCCCHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCHHHHCCCCCH
FNVINEFNGRSRWRRGPDPSAEQTKSEPRKVFNAERKALQVMGLDSDATLEVVKAKYKAL
HHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
VKQHHPDANGGDRSTEDRLIEIIKAYNYLKTVVRT
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AIDSSKFFDKIRVKPTKAAAAKEAAREQVIMCDAPGCANRGAHRAPKGRGLEKDYWHFC
CCCCHHHHHHHCCCCHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHH
LNHVREYNQGYNFFEGMNADAVARYQKDALTGHRPTWKMGQNGAKSRTKNPEDLAGAADP
HHHHHHHHCCCCHHHCCCHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCHHHHCCCCCH
FNVINEFNGRSRWRRGPDPSAEQTKSEPRKVFNAERKALQVMGLDSDATLEVVKAKYKAL
HHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
VKQHHPDANGGDRSTEDRLIEIIKAYNYLKTVVRT
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1917840 [H]