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The map label for this gene is yfjD [H]

Identifier: 86747663

GI number: 86747663

Start: 602558

End: 603901

Strand: Direct

Name: yfjD [H]

Synonym: RPB_0537

Alternate gene names: 86747663

Gene position: 602558-603901 (Clockwise)

Preceding gene: 86747662

Following gene: 86747665

Centisome position: 11.3

GC content: 67.71

Gene sequence:

>1344_bases
GTGAGCGAGCGCGAGATCATGGACTGGGTGACGTCCGGTATCGTCATCGCCTGTCTGTTCGGCTCGGCGTTCTTCTCCGC
CAGCGAGACCGCACTGACCGCGGCCTCGCGCGCCAACATGATGCGGCTGGCGAAGCAGGGCAGCCGCAACGCCGGCATCG
TCGGCCGGCTGCTGGCGACGCGCGAGCGGATGATCGGCGCGCTGCTGCTCGGCAACAACATCTTCAACATCGGCGCCTCG
GCGCTGGCGACCGGCCTGTTCACGGCCTGGTTCGGCGAGTTCGGCGTGCTCTACGCCACCGCGGTGATGACCGCGCTGGT
GGTGATCTTTGCCGAGGTGCTGCCCAAGACCGTCGCCATCAACGCGCCGGATCGTTTCGCGCTGCTGGTCGCCAAGCCGA
TGCGGCTGATGGTGCTGGTGCTCGGCCCGCTGCTCACGGTGATCGAGGCGCTGGTCCGCGTGCTGATGCGGCTGCTCGGC
ATCAAGGTCGGCGCGCATCAGTCGCTGCTGTCGGCGACCGAGCGGCTGCGCGGCGCGGTCGAACTGATCCATCACGAAGG
CGGCGTCGCCAAGCACGACCGCGACATGTTCGGCGGCCTGCTCGATCTCAGCGAATTGCAGGTCTCCGACGTGATGGTCC
ACCGCACCGAGATGGTGATGGTCAACGCCGACCTGCCGCCGGAGGAACTGGTTCGCGAGGTGCTGGCCACCGAGTACACC
CGGATTCCGCTGTGGCGCGAGAAGCCGGAGAACATCATCGGCGTGCTGCACGCCAAGGATCTGCTGCGGGCGATGCGCGC
CGCCGACGGTGACGCCGGCAAGATCGACGTCAACAAGATCGCGCTGCCGCCGTGGTTCGTGCCGGAGATGCGGCTGGTGT
CGGAGCAGCTCAAGGCGTTCCGCTCGCGCAAGACCCACTTCGCGCTGGTGGTCGACGAATACGGCGAAGTCGAAGGCATG
GTGACGCTCGAGGACATCCTCGAGGAAATCGTCGGCGACATCTCCGACGAGCACGACGTCGTGGTCGCCGGCGTTCGCAC
CCAGCCGGACGGCTCGGTCGTGGTGGATGGTTCGGTGCCGATCCGCGATCTCAATCGCGCGATGGACTGGAATCTGCCGG
ACGAGGAAGCCACCACGATCGCCGGCCTGGTGATCCACGAGGCGCGCTCGATCCCGGTGCGGGGCCAGAGCTTCACCTTC
CACGGCTTCCGCTTCCGGGTGCTGCGCCGCGAGCGCAATCGCATCACCGCGCTGCGCATCGTCCCCGTGCTGCGCGAGAC
AGAAGCCGAGCTCGCCGACAAGAAGTCCGGGAAGATCGCGCGCATCGGCGGCCCCGCGGCGTGA

Upstream 100 bases:

>100_bases
CCTTCATCCTGATGGAAGGGATCGGCCGCGCGGTGATCGCCGACAAGGTCGAGCCGGCGCCGGTTCGCGATTTCCTGGCC
CGGCAGCTCGCGCGCGCATC

Downstream 100 bases:

>100_bases
GCCGCGGGCGCGCCTCCCTTACGCTTCGCCCGGCGCCCTGGCCTTCAGCGCCAGCGCGTGGACGCCGCCCGAAAGTTCCG
CCGCCAGCAATTCGTTGACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 447; Mature: 446

Protein sequence:

>447_residues
MSEREIMDWVTSGIVIACLFGSAFFSASETALTAASRANMMRLAKQGSRNAGIVGRLLATRERMIGALLLGNNIFNIGAS
ALATGLFTAWFGEFGVLYATAVMTALVVIFAEVLPKTVAINAPDRFALLVAKPMRLMVLVLGPLLTVIEALVRVLMRLLG
IKVGAHQSLLSATERLRGAVELIHHEGGVAKHDRDMFGGLLDLSELQVSDVMVHRTEMVMVNADLPPEELVREVLATEYT
RIPLWREKPENIIGVLHAKDLLRAMRAADGDAGKIDVNKIALPPWFVPEMRLVSEQLKAFRSRKTHFALVVDEYGEVEGM
VTLEDILEEIVGDISDEHDVVVAGVRTQPDGSVVVDGSVPIRDLNRAMDWNLPDEEATTIAGLVIHEARSIPVRGQSFTF
HGFRFRVLRRERNRITALRIVPVLRETEAELADKKSGKIARIGGPAA

Sequences:

>Translated_447_residues
MSEREIMDWVTSGIVIACLFGSAFFSASETALTAASRANMMRLAKQGSRNAGIVGRLLATRERMIGALLLGNNIFNIGAS
ALATGLFTAWFGEFGVLYATAVMTALVVIFAEVLPKTVAINAPDRFALLVAKPMRLMVLVLGPLLTVIEALVRVLMRLLG
IKVGAHQSLLSATERLRGAVELIHHEGGVAKHDRDMFGGLLDLSELQVSDVMVHRTEMVMVNADLPPEELVREVLATEYT
RIPLWREKPENIIGVLHAKDLLRAMRAADGDAGKIDVNKIALPPWFVPEMRLVSEQLKAFRSRKTHFALVVDEYGEVEGM
VTLEDILEEIVGDISDEHDVVVAGVRTQPDGSVVVDGSVPIRDLNRAMDWNLPDEEATTIAGLVIHEARSIPVRGQSFTF
HGFRFRVLRRERNRITALRIVPVLRETEAELADKKSGKIARIGGPAA
>Mature_446_residues
SEREIMDWVTSGIVIACLFGSAFFSASETALTAASRANMMRLAKQGSRNAGIVGRLLATRERMIGALLLGNNIFNIGASA
LATGLFTAWFGEFGVLYATAVMTALVVIFAEVLPKTVAINAPDRFALLVAKPMRLMVLVLGPLLTVIEALVRVLMRLLGI
KVGAHQSLLSATERLRGAVELIHHEGGVAKHDRDMFGGLLDLSELQVSDVMVHRTEMVMVNADLPPEELVREVLATEYTR
IPLWREKPENIIGVLHAKDLLRAMRAADGDAGKIDVNKIALPPWFVPEMRLVSEQLKAFRSRKTHFALVVDEYGEVEGMV
TLEDILEEIVGDISDEHDVVVAGVRTQPDGSVVVDGSVPIRDLNRAMDWNLPDEEATTIAGLVIHEARSIPVRGQSFTFH
GFRFRVLRRERNRITALRIVPVLRETEAELADKKSGKIARIGGPAA

Specific function: Unknown

COG id: COG4536

COG function: function code P; Putative Mg2+ and Co2+ transporter CorB

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=415, Percent_Identity=26.2650602409639, Blast_Score=143, Evalue=4e-34,
Organism=Homo sapiens, GI94681046, Length=287, Percent_Identity=26.8292682926829, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI40068053, Length=289, Percent_Identity=26.9896193771626, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI40068055, Length=289, Percent_Identity=26.9896193771626, Blast_Score=68, Evalue=2e-11,
Organism=Escherichia coli, GI145693175, Length=411, Percent_Identity=35.2798053527981, Blast_Score=247, Evalue=1e-66,
Organism=Escherichia coli, GI1790664, Length=429, Percent_Identity=25.4079254079254, Blast_Score=134, Evalue=1e-32,
Organism=Escherichia coli, GI1786879, Length=228, Percent_Identity=33.3333333333333, Blast_Score=128, Evalue=7e-31,
Organism=Escherichia coli, GI87082033, Length=243, Percent_Identity=29.6296296296296, Blast_Score=112, Evalue=5e-26,
Organism=Escherichia coli, GI1788119, Length=238, Percent_Identity=28.9915966386555, Blast_Score=85, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6324512, Length=254, Percent_Identity=27.5590551181102, Blast_Score=71, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 49031; Mature: 48900

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEREIMDWVTSGIVIACLFGSAFFSASETALTAASRANMMRLAKQGSRNAGIVGRLLAT
CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
RERMIGALLLGNNIFNIGASALATGLFTAWFGEFGVLYATAVMTALVVIFAEVLPKTVAI
HHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEE
NAPDRFALLVAKPMRLMVLVLGPLLTVIEALVRVLMRLLGIKVGAHQSLLSATERLRGAV
CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
ELIHHEGGVAKHDRDMFGGLLDLSELQVSDVMVHRTEMVMVNADLPPEELVREVLATEYT
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCHHHHHHHHHHHHHH
RIPLWREKPENIIGVLHAKDLLRAMRAADGDAGKIDVNKIALPPWFVPEMRLVSEQLKAF
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECEEECCCCCCHHHHHHHHHHHHH
RSRKTHFALVVDEYGEVEGMVTLEDILEEIVGDISDEHDVVVAGVRTQPDGSVVVDGSVP
HCCCCEEEEEEECCCCCCCEEEHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEECCCC
IRDLNRAMDWNLPDEEATTIAGLVIHEARSIPVRGQSFTFHGFRFRVLRRERNRITALRI
HHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHCCEEEEEH
VPVLRETEAELADKKSGKIARIGGPAA
HHHHHHHHHHHHHCCCCCEEECCCCCC
>Mature Secondary Structure 
SEREIMDWVTSGIVIACLFGSAFFSASETALTAASRANMMRLAKQGSRNAGIVGRLLAT
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
RERMIGALLLGNNIFNIGASALATGLFTAWFGEFGVLYATAVMTALVVIFAEVLPKTVAI
HHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEE
NAPDRFALLVAKPMRLMVLVLGPLLTVIEALVRVLMRLLGIKVGAHQSLLSATERLRGAV
CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
ELIHHEGGVAKHDRDMFGGLLDLSELQVSDVMVHRTEMVMVNADLPPEELVREVLATEYT
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCHHHHHHHHHHHHHH
RIPLWREKPENIIGVLHAKDLLRAMRAADGDAGKIDVNKIALPPWFVPEMRLVSEQLKAF
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECEEECCCCCCHHHHHHHHHHHHH
RSRKTHFALVVDEYGEVEGMVTLEDILEEIVGDISDEHDVVVAGVRTQPDGSVVVDGSVP
HCCCCEEEEEEECCCCCCCEEEHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEECCCC
IRDLNRAMDWNLPDEEATTIAGLVIHEARSIPVRGQSFTFHGFRFRVLRRERNRITALRI
HHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHCCEEEEEH
VPVLRETEAELADKKSGKIARIGGPAA
HHHHHHHHHHHHHCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 3045760 [H]