The gene/protein map for NC_011745 is currently unavailable.
Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is yusZ [H]

Identifier: 86747652

GI number: 86747652

Start: 587348

End: 588187

Strand: Reverse

Name: yusZ [H]

Synonym: RPB_0526

Alternate gene names: 86747652

Gene position: 588187-587348 (Counterclockwise)

Preceding gene: 86747655

Following gene: 86747651

Centisome position: 11.03

GC content: 67.02

Gene sequence:

>840_bases
ATGACCTCTACGCCCCGCACCTGGTTCATCACCGGCACCTCGTCCGGCTTCGGTCGGGCGATGACCGAGCAACTGCTGGC
GCGCGGCGACCGTGTCGCCGCCACGCTGCGCAGGCCGGACGCGCTCGACGATCTCGATCAGCACTATGGCGACCGGCTCT
GGATCGCGCAGCTCGACGTCACCGACAGCGCGGCGGTCAGCACTGTGGTCGAGCGCGCGTTTGCCGAGCTCGGCCGCATC
GACGTCGTGGTCAACAACGCCGGCTACGGTCTGCAGGGGGCGGCGGAGGAACTGAGCGACGCGCAGATCCGGCATCAGAT
CGACACCAATGTGATCGGCTCGATCCAGATTGTGCGCGCGACCTTGCCGCATCTGCGAGCCCAGGGCGGCGGCCGAATCC
TGCAGCTGTCGTCGATGGGCGGCCAAGTGACGTTCCCCGGCCTCAGCCTGTATCACGCCTCGAAATGGGCGATCGAAGGC
TTCATCGAAGCGGTCGCCCAGGAGGTGTCACCGTTCAAGATCGGCTTCACGATTGTCGAGCCGGGCGCTGCACGCACTGG
CTTTGGCAGTGGCCTGGTCAATGCCGAACCGCTCGCGAGTTACGACGACACCCCGGTCGGCGAGATCCGGCGGGCGTTCG
CGGCTGGTTTATTCCCTGTGCCAGGCGACGCGCAGAAGATGGCACAGGCGATGATCGACTCGGTCGATTGCACGCCGGCG
CCGCTGCGCCTCACCCTCGGCAGCGATGCCTACGCCATGGTGCGTGCCAACCTGGTCGAGCGGCTCGCTGCGCTCGATGC
ACAGAAGGCCGTTGCGCTCTCCACGGATCGCGACGGCTGA

Upstream 100 bases:

>100_bases
ACCAGATCATCCAAGATTGCGCGGATAGTAGCACGAATGTCTTCCGCCTAACTGATTCATCGATGGCCGCATCGGGCGGC
CCCGTCCAAAGGCGATCGCC

Downstream 100 bases:

>100_bases
GCGTGCATTGACCACGTCGGCCGGCCTTCCTAAGAGTGCCTTTCAATTCCGGCCCTCAGCCCGGAATCGCCAGCAAGGGA
GAGAACCATGGCCGACGTCT

Product: short chain dehydrogenase

Products: NA

Alternate protein names: ORFA [H]

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MTSTPRTWFITGTSSGFGRAMTEQLLARGDRVAATLRRPDALDDLDQHYGDRLWIAQLDVTDSAAVSTVVERAFAELGRI
DVVVNNAGYGLQGAAEELSDAQIRHQIDTNVIGSIQIVRATLPHLRAQGGGRILQLSSMGGQVTFPGLSLYHASKWAIEG
FIEAVAQEVSPFKIGFTIVEPGAARTGFGSGLVNAEPLASYDDTPVGEIRRAFAAGLFPVPGDAQKMAQAMIDSVDCTPA
PLRLTLGSDAYAMVRANLVERLAALDAQKAVALSTDRDG

Sequences:

>Translated_279_residues
MTSTPRTWFITGTSSGFGRAMTEQLLARGDRVAATLRRPDALDDLDQHYGDRLWIAQLDVTDSAAVSTVVERAFAELGRI
DVVVNNAGYGLQGAAEELSDAQIRHQIDTNVIGSIQIVRATLPHLRAQGGGRILQLSSMGGQVTFPGLSLYHASKWAIEG
FIEAVAQEVSPFKIGFTIVEPGAARTGFGSGLVNAEPLASYDDTPVGEIRRAFAAGLFPVPGDAQKMAQAMIDSVDCTPA
PLRLTLGSDAYAMVRANLVERLAALDAQKAVALSTDRDG
>Mature_278_residues
TSTPRTWFITGTSSGFGRAMTEQLLARGDRVAATLRRPDALDDLDQHYGDRLWIAQLDVTDSAAVSTVVERAFAELGRID
VVVNNAGYGLQGAAEELSDAQIRHQIDTNVIGSIQIVRATLPHLRAQGGGRILQLSSMGGQVTFPGLSLYHASKWAIEGF
IEAVAQEVSPFKIGFTIVEPGAARTGFGSGLVNAEPLASYDDTPVGEIRRAFAAGLFPVPGDAQKMAQAMIDSVDCTPAP
LRLTLGSDAYAMVRANLVERLAALDAQKAVALSTDRDG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI7657478, Length=261, Percent_Identity=32.5670498084291, Blast_Score=119, Evalue=3e-27,
Organism=Homo sapiens, GI223718074, Length=222, Percent_Identity=33.3333333333333, Blast_Score=108, Evalue=5e-24,
Organism=Homo sapiens, GI22507405, Length=222, Percent_Identity=30.1801801801802, Blast_Score=91, Evalue=9e-19,
Organism=Homo sapiens, GI150247226, Length=227, Percent_Identity=31.7180616740088, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI4503817, Length=180, Percent_Identity=30.5555555555556, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI19743808, Length=214, Percent_Identity=31.7757009345794, Blast_Score=89, Evalue=4e-18,
Organism=Homo sapiens, GI20149619, Length=196, Percent_Identity=26.0204081632653, Blast_Score=89, Evalue=6e-18,
Organism=Homo sapiens, GI119392083, Length=187, Percent_Identity=32.0855614973262, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI44680136, Length=182, Percent_Identity=30.7692307692308, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI44680133, Length=182, Percent_Identity=30.7692307692308, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI17738292, Length=182, Percent_Identity=30.7692307692308, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI50726952, Length=182, Percent_Identity=35.7142857142857, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI7706318, Length=172, Percent_Identity=27.906976744186, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI40548397, Length=239, Percent_Identity=25.9414225941423, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI214010158, Length=239, Percent_Identity=25.9414225941423, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI214010156, Length=239, Percent_Identity=25.9414225941423, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI22758144, Length=239, Percent_Identity=25.9414225941423, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI40254992, Length=185, Percent_Identity=31.3513513513514, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI157739938, Length=187, Percent_Identity=24.5989304812834, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI59889578, Length=139, Percent_Identity=30.2158273381295, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI32455239, Length=182, Percent_Identity=26.3736263736264, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI5031765, Length=182, Percent_Identity=26.3736263736264, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI4758504, Length=204, Percent_Identity=29.4117647058824, Blast_Score=65, Evalue=7e-11,
Organism=Escherichia coli, GI1787820, Length=175, Percent_Identity=33.7142857142857, Blast_Score=99, Evalue=4e-22,
Organism=Escherichia coli, GI1787335, Length=231, Percent_Identity=27.7056277056277, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1786701, Length=188, Percent_Identity=32.4468085106383, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI87082100, Length=186, Percent_Identity=32.7956989247312, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI1786812, Length=189, Percent_Identity=27.5132275132275, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1788459, Length=204, Percent_Identity=28.921568627451, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1789208, Length=219, Percent_Identity=27.8538812785388, Blast_Score=65, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17507613, Length=263, Percent_Identity=27.7566539923954, Blast_Score=87, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI32563809, Length=263, Percent_Identity=27.7566539923954, Blast_Score=87, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI71997402, Length=188, Percent_Identity=29.7872340425532, Blast_Score=85, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI71994604, Length=231, Percent_Identity=27.7056277056277, Blast_Score=80, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI17560332, Length=248, Percent_Identity=28.6290322580645, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17570069, Length=182, Percent_Identity=29.6703296703297, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI115534660, Length=182, Percent_Identity=29.1208791208791, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17557780, Length=188, Percent_Identity=27.1276595744681, Blast_Score=74, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17559964, Length=212, Percent_Identity=29.2452830188679, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI71994600, Length=187, Percent_Identity=26.2032085561497, Blast_Score=71, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI72001658, Length=210, Percent_Identity=26.6666666666667, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17559104, Length=230, Percent_Identity=26.5217391304348, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17560150, Length=192, Percent_Identity=26.5625, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17562910, Length=194, Percent_Identity=25.7731958762887, Blast_Score=66, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17538486, Length=213, Percent_Identity=26.7605633802817, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17562906, Length=198, Percent_Identity=26.2626262626263, Blast_Score=64, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI72000259, Length=228, Percent_Identity=26.7543859649123, Blast_Score=64, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17508895, Length=167, Percent_Identity=23.9520958083832, Blast_Score=64, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=197, Percent_Identity=33.502538071066, Blast_Score=102, Evalue=9e-23,
Organism=Saccharomyces cerevisiae, GI6322067, Length=253, Percent_Identity=28.0632411067194, Blast_Score=82, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6322861, Length=190, Percent_Identity=26.3157894736842, Blast_Score=69, Evalue=8e-13,
Organism=Drosophila melanogaster, GI116007236, Length=191, Percent_Identity=32.9842931937173, Blast_Score=91, Evalue=9e-19,
Organism=Drosophila melanogaster, GI116007238, Length=176, Percent_Identity=33.5227272727273, Blast_Score=87, Evalue=9e-18,
Organism=Drosophila melanogaster, GI23397609, Length=251, Percent_Identity=29.0836653386454, Blast_Score=85, Evalue=6e-17,
Organism=Drosophila melanogaster, GI21358495, Length=188, Percent_Identity=28.7234042553192, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI28571526, Length=231, Percent_Identity=29.8701298701299, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24643142, Length=185, Percent_Identity=28.6486486486486, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI21357041, Length=187, Percent_Identity=33.1550802139037, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI281364892, Length=195, Percent_Identity=29.7435897435897, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24641388, Length=216, Percent_Identity=31.0185185185185, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI28571387, Length=190, Percent_Identity=31.5789473684211, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24581726, Length=154, Percent_Identity=27.9220779220779, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI281364494, Length=193, Percent_Identity=30.5699481865285, Blast_Score=68, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24641232, Length=195, Percent_Identity=27.1794871794872, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24663911, Length=191, Percent_Identity=28.7958115183246, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24644339, Length=239, Percent_Identity=24.6861924686192, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 29655; Mature: 29524

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MTSTPRTWFITGTSSGFGRAMTEQLLARGDRVAATLRRPDALDDLDQHYGDRLWIAQLDV
CCCCCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHCCCEEEEEEECC
TDSAAVSTVVERAFAELGRIDVVVNNAGYGLQGAAEELSDAQIRHQIDTNVIGSIQIVRA
CCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHCHHHHHHH
TLPHLRAQGGGRILQLSSMGGQVTFPGLSLYHASKWAIEGFIEAVAQEVSPFKIGFTIVE
HHHHHHCCCCCEEEEEECCCCEEECCCCEEHHHHHHHHHHHHHHHHHHCCCEEEEEEEEC
PGAARTGFGSGLVNAEPLASYDDTPVGEIRRAFAAGLFPVPGDAQKMAQAMIDSVDCTPA
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCC
PLRLTLGSDAYAMVRANLVERLAALDAQKAVALSTDRDG
CEEEEECCCHHHHHHHHHHHHHHHHCHHHEEEECCCCCC
>Mature Secondary Structure 
TSTPRTWFITGTSSGFGRAMTEQLLARGDRVAATLRRPDALDDLDQHYGDRLWIAQLDV
CCCCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHCCCEEEEEEECC
TDSAAVSTVVERAFAELGRIDVVVNNAGYGLQGAAEELSDAQIRHQIDTNVIGSIQIVRA
CCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHCHHHHHHH
TLPHLRAQGGGRILQLSSMGGQVTFPGLSLYHASKWAIEGFIEAVAQEVSPFKIGFTIVE
HHHHHHCCCCCEEEEEECCCCEEECCCCEEHHHHHHHHHHHHHHHHHHCCCEEEEEEEEC
PGAARTGFGSGLVNAEPLASYDDTPVGEIRRAFAAGLFPVPGDAQKMAQAMIDSVDCTPA
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCC
PLRLTLGSDAYAMVRANLVERLAALDAQKAVALSTDRDG
CEEEEECCCHHHHHHHHHHHHHHHHCHHHEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353931; 9384377; 8396117 [H]