| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is zur [H]
Identifier: 86747650
GI number: 86747650
Start: 585399
End: 585887
Strand: Reverse
Name: zur [H]
Synonym: RPB_0524
Alternate gene names: 86747650
Gene position: 585887-585399 (Counterclockwise)
Preceding gene: 86747651
Following gene: 86747649
Centisome position: 10.99
GC content: 67.48
Gene sequence:
>489_bases ATGACTGCTTTGAAGCCGGCCTTTCCCGCCCCCGGTCACGATCACGACCGTTGTGCCGCCGAAGGCATCGAGCACGCCGA ACGGATCTGTGCGGACCGCTCACAGAACCTGACGCCGATCCGGCGGCAGGTGCTGCGGGCGCTGCTGTCCAGCCATCGCC CGCTCGGCGCCTATGAGGTGATCGACGAACTGGCGCGCGTGATGCCGCGCCCGGCGCCGATCACGGTGTATCGCGCGCTC GACTTCCTGATGCAGAACGGGCTGGTGCACCGGATCGAAAGCCGCAACGCGTTTCTCGCCTGCGGCCGCGAACACGACGA CGCCTCCGCGGTCGCTTTCCTGATCTGCGAATCCTGCGGTTCGGTCGGCGAGATTCCCGCCACCGCCGTGGCGCAGAGTC TCAGCGAGGCGGCGCGCCAGACCGGCTTCACGCCGAAGCTCTCGGTGGTGGAAATCACCGGCGTCTGCGGGCATTGCCAA TCCACCTGA
Upstream 100 bases:
>100_bases CCGCAACAGCCCCGCGTTCCGCAAGACTTGTGCCGGGAGACGCCGTAAACTATCGGTGGTTGCTGCTGCGTTGAGGCACC TGCTGCGTTGAGGCAATGCG
Downstream 100 bases:
>100_bases CGCAGTCTACGCCTTGAACAACCGGGAGGAGCGTTGCTCGCACGCGAGCACGCCCGCGACAACACGGCGGCAAGCCGGAG GCGCAATGTCGATTTTCTCT
Product: ferric uptake regulator family protein
Products: NA
Alternate protein names: Zinc uptake regulator [H]
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MTALKPAFPAPGHDHDRCAAEGIEHAERICADRSQNLTPIRRQVLRALLSSHRPLGAYEVIDELARVMPRPAPITVYRAL DFLMQNGLVHRIESRNAFLACGREHDDASAVAFLICESCGSVGEIPATAVAQSLSEAARQTGFTPKLSVVEITGVCGHCQ ST
Sequences:
>Translated_162_residues MTALKPAFPAPGHDHDRCAAEGIEHAERICADRSQNLTPIRRQVLRALLSSHRPLGAYEVIDELARVMPRPAPITVYRAL DFLMQNGLVHRIESRNAFLACGREHDDASAVAFLICESCGSVGEIPATAVAQSLSEAARQTGFTPKLSVVEITGVCGHCQ ST >Mature_161_residues TALKPAFPAPGHDHDRCAAEGIEHAERICADRSQNLTPIRRQVLRALLSSHRPLGAYEVIDELARVMPRPAPITVYRALD FLMQNGLVHRIESRNAFLACGREHDDASAVAFLICESCGSVGEIPATAVAQSLSEAARQTGFTPKLSVVEITGVCGHCQS T
Specific function: Acts as a negative controlling element, employing Zn(2+) as a cofactor to bind the operator of the repressed genes (znuACB) [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI87082363, Length=139, Percent_Identity=38.1294964028777, Blast_Score=103, Evalue=8e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 17501; Mature: 17370
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALKPAFPAPGHDHDRCAAEGIEHAERICADRSQNLTPIRRQVLRALLSSHRPLGAYEV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHH IDELARVMPRPAPITVYRALDFLMQNGLVHRIESRNAFLACGREHDDASAVAFLICESCG HHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCC SVGEIPATAVAQSLSEAARQTGFTPKLSVVEITGVCGHCQST CCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCC >Mature Secondary Structure TALKPAFPAPGHDHDRCAAEGIEHAERICADRSQNLTPIRRQVLRALLSSHRPLGAYEV CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHH IDELARVMPRPAPITVYRALDFLMQNGLVHRIESRNAFLACGREHDDASAVAFLICESCG HHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCC SVGEIPATAVAQSLSEAARQTGFTPKLSVVEITGVCGHCQST CCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 9680209 [H]