Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is yoaV [H]

Identifier: 86747649

GI number: 86747649

Start: 584355

End: 585272

Strand: Reverse

Name: yoaV [H]

Synonym: RPB_0523

Alternate gene names: 86747649

Gene position: 585272-584355 (Counterclockwise)

Preceding gene: 86747650

Following gene: 86747648

Centisome position: 10.98

GC content: 66.88

Gene sequence:

>918_bases
ATGTCGGCACAGATAGGCGGCGCGGCTGCCCGGCCGCTGACCGCGGGCGCGATCGCCCTGATGCTGCTGTGCTGCTTCAG
CTGGGGCTTCAACCAGATCGCCGTGAAGCTAGTGCTGCCGGACATCCCGCCCTTCCTGCAGGCGGCGATCCGCTCCGCCG
GAGCCATGATCGTGATCCTGATCATCGCCCGGGCGCGCGGCGTGAAGCTGTTTCAGCGCGACGGCACGCTGAAGGCCGGG
CTGCTCGCCGGCGTGCTGTTCGGGCTGGAATTCGTGCTGATCTATTATGGATTGACCCTGACCACGGCGTCGCGCGGGGT
GGTGTTTCTCTATGTGGCGCCGTTTGTCGTGGCGCTGGGCGCCTACCATTTCCTCGGCGAGCGGCTGCGCGCCATGCAAT
GGGCCGGGCTGGCGCTCAGCTTCGCCGGCGTGGCGGTGGCGATCGGGGTGCCGCAGCCCAATGTCGACGCCAAGGTGCTG
CTCGGCGACCTGATGCTGGTCGGCGGCGGGGCACTGTGGGGTGCCACCACCCTGGTGGTGAAGGCGAGCCCGCTGCAGCG
GGCCCCCGCCGAGAAGGGGCTGGCCTATCAGGTGGCGCTCTCGGTGCCGATTCTGCTGTTCGCGGCGCTGATTGCGGGCG
AAACCATCGAGCAAACGCCCACCCCCCTGTCGCTGGCGCTGATGGCCTACCAGTCGATCTGGGTGGTGGGCCTGACCTTT
CTGCTCTGGTTCGGCCTGGTGAAGACCTATTCGGCCAGCAAATTGTCGGCTTTTACCTTCTTCACCCCTTTATTCGGGGT
GGCGGCGGGCTATCTGATCCTGCACGAACCGCTGACCCCGGCGTTCGGCTTCGCGGCACTGCTGGTCATGGCCGGGCTGT
ATCTGGTCAACCGGCCCGGCAAGGTTCCGGCTTTGTGA

Upstream 100 bases:

>100_bases
AGGAGCGTTGCTCGCACGCGAGCACGCCCGCGACAACACGGCGGCAAGCCGGAGGCGCAATGTCGATTTTCTCTTTCGCC
GCACAGCAGACATCCGGCCG

Downstream 100 bases:

>100_bases
GGCCGGATCTTGCGGTTCCGGGCGGCGGTGGCCAAGTCATCCCGGGGTTCCTGCACCCATTGATCCATTGCTGACTGTCA
CCAAAACCTGATATTCCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MSAQIGGAAARPLTAGAIALMLLCCFSWGFNQIAVKLVLPDIPPFLQAAIRSAGAMIVILIIARARGVKLFQRDGTLKAG
LLAGVLFGLEFVLIYYGLTLTTASRGVVFLYVAPFVVALGAYHFLGERLRAMQWAGLALSFAGVAVAIGVPQPNVDAKVL
LGDLMLVGGGALWGATTLVVKASPLQRAPAEKGLAYQVALSVPILLFAALIAGETIEQTPTPLSLALMAYQSIWVVGLTF
LLWFGLVKTYSASKLSAFTFFTPLFGVAAGYLILHEPLTPAFGFAALLVMAGLYLVNRPGKVPAL

Sequences:

>Translated_305_residues
MSAQIGGAAARPLTAGAIALMLLCCFSWGFNQIAVKLVLPDIPPFLQAAIRSAGAMIVILIIARARGVKLFQRDGTLKAG
LLAGVLFGLEFVLIYYGLTLTTASRGVVFLYVAPFVVALGAYHFLGERLRAMQWAGLALSFAGVAVAIGVPQPNVDAKVL
LGDLMLVGGGALWGATTLVVKASPLQRAPAEKGLAYQVALSVPILLFAALIAGETIEQTPTPLSLALMAYQSIWVVGLTF
LLWFGLVKTYSASKLSAFTFFTPLFGVAAGYLILHEPLTPAFGFAALLVMAGLYLVNRPGKVPAL
>Mature_304_residues
SAQIGGAAARPLTAGAIALMLLCCFSWGFNQIAVKLVLPDIPPFLQAAIRSAGAMIVILIIARARGVKLFQRDGTLKAGL
LAGVLFGLEFVLIYYGLTLTTASRGVVFLYVAPFVVALGAYHFLGERLRAMQWAGLALSFAGVAVAIGVPQPNVDAKVLL
GDLMLVGGGALWGATTLVVKASPLQRAPAEKGLAYQVALSVPILLFAALIAGETIEQTPTPLSLALMAYQSIWVVGLTFL
LWFGLVKTYSASKLSAFTFFTPLFGVAAGYLILHEPLTPAFGFAALLVMAGLYLVNRPGKVPAL

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 32051; Mature: 31920

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAQIGGAAARPLTAGAIALMLLCCFSWGFNQIAVKLVLPDIPPFLQAAIRSAGAMIVIL
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCHHHHHHHHCCCHHHHHH
IIARARGVKLFQRDGTLKAGLLAGVLFGLEFVLIYYGLTLTTASRGVVFLYVAPFVVALG
HHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEHHHHHHHHHH
AYHFLGERLRAMQWAGLALSFAGVAVAIGVPQPNVDAKVLLGDLMLVGGGALWGATTLVV
HHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHEEEEE
KASPLQRAPAEKGLAYQVALSVPILLFAALIAGETIEQTPTPLSLALMAYQSIWVVGLTF
ECCCHHCCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHH
LLWFGLVKTYSASKLSAFTFFTPLFGVAAGYLILHEPLTPAFGFAALLVMAGLYLVNRPG
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHCCCC
KVPAL
CCCCC
>Mature Secondary Structure 
SAQIGGAAARPLTAGAIALMLLCCFSWGFNQIAVKLVLPDIPPFLQAAIRSAGAMIVIL
CCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCHHHHHHHHCCCHHHHHH
IIARARGVKLFQRDGTLKAGLLAGVLFGLEFVLIYYGLTLTTASRGVVFLYVAPFVVALG
HHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEHHHHHHHHHH
AYHFLGERLRAMQWAGLALSFAGVAVAIGVPQPNVDAKVLLGDLMLVGGGALWGATTLVV
HHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHEEEEE
KASPLQRAPAEKGLAYQVALSVPILLFAALIAGETIEQTPTPLSLALMAYQSIWVVGLTF
ECCCHHCCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHH
LLWFGLVKTYSASKLSAFTFFTPLFGVAAGYLILHEPLTPAFGFAALLVMAGLYLVNRPG
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHCCCC
KVPAL
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]