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The map label for this gene is dppB [H]

Identifier: 86747258

GI number: 86747258

Start: 141377

End: 142357

Strand: Reverse

Name: dppB [H]

Synonym: RPB_0131

Alternate gene names: 86747258

Gene position: 142357-141377 (Counterclockwise)

Preceding gene: 86747259

Following gene: 86747257

Centisome position: 2.67

GC content: 64.73

Gene sequence:

>981_bases
ATGACGCTCCTCACCCATCTGTTCGGAAAACTCGCCAACGCCGCGGCGCTGCTGCTCGCGGTGCTGGTGCTGAATTTCTG
CTTGATCCATCTTGCACCGGGCGATCCGGTGCAAGTGATCGCCGGAGAGATGGGTGGGGCGTCGGCGGAAGTGATCGCCG
AGTTGCGCGCCAAATACGGCCTCGATCAGAGTCTGCTGCAGCAGCTCTTCACCTATCTCGGAAACGTCGTTCAGGGCGAT
TTCGGCTATTCTTACTACTTCAACCAGCCGGTGCTGAACCTGATCGCGCAGCGGCTGCCGGCGTCGCTGTATCTGGCGCT
GTCGTCGCTGTTCACCGCGGTGGTGATCGGCACGCTGCTCGGCGTGGTCAGCGCGCGCCGCCCGAACGGGGCGCTCAGCC
ACGTCGTCACGGTGCTGTCGCTGACCGGCTATGCGGCGCCGATCTTCTGGACCGGACTGATGTTGCTGTTGCTGTTCGGC
TCGGTGTGGCCGGTGCTGCCGGTCAGCGGCATGGCCGACGTCGTCAACCCCAAGGCCGGCTTCGCCTATGCGCTCGACGT
CGCGACCCATCTGGTGCTGCCGTCGCTGACGCTGGCGCTGGTGTTCATCGCGCAATATTCGCGGCTGGCGCGCGTCAACA
TGATCGACGTGCTGTCGGCGGATTACGTCCGAACCGCCCGCGCCAAGGGCCTGCCGGAACGCGTGGTGATCTTCAAGCAC
GCGCTGCGCAACGCCCTGATCCCGATCGTCACGGTCGTCGGGCATCAGTTCGGCAATCTGTTCGCCGGCGCGGTGCTGGT
CGAGACGGTGTTCAGCTGGCCGGGCATGGGGCGGCTGGTGTTCGATTCGATCCTGCGCCGCGACTATCCGACGCTGATGG
CGGTGCTGTTCTTCTCCGCGGTGATGGTGATCGCCGCCAATATCATCACCGACCTGGTGTATCGCCTGGTCGATCCACGT
ATCCGCGCGGGGGCCCGATGA

Upstream 100 bases:

>100_bases
GGCTGCCGACCACGATCTGGGGCGTCGTCTCGCCGCTCGACGAAGTGCACTGGGTCACGCCGCCGAAGACCTGAACCCAA
CCGGGTAGACAGACAGCACC

Downstream 100 bases:

>100_bases
GCACGCTCGACCAGACGCTGATCGTGGCGCAGACCGCGCCGCCGCCCGCGGCGCCGGGCGCACTGCCGGCCGCCAAGGCG
GTGTCGCCGGCCAGCGCCGC

Product: binding-protein dependent transport system inner membrane protein

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MTLLTHLFGKLANAAALLLAVLVLNFCLIHLAPGDPVQVIAGEMGGASAEVIAELRAKYGLDQSLLQQLFTYLGNVVQGD
FGYSYYFNQPVLNLIAQRLPASLYLALSSLFTAVVIGTLLGVVSARRPNGALSHVVTVLSLTGYAAPIFWTGLMLLLLFG
SVWPVLPVSGMADVVNPKAGFAYALDVATHLVLPSLTLALVFIAQYSRLARVNMIDVLSADYVRTARAKGLPERVVIFKH
ALRNALIPIVTVVGHQFGNLFAGAVLVETVFSWPGMGRLVFDSILRRDYPTLMAVLFFSAVMVIAANIITDLVYRLVDPR
IRAGAR

Sequences:

>Translated_326_residues
MTLLTHLFGKLANAAALLLAVLVLNFCLIHLAPGDPVQVIAGEMGGASAEVIAELRAKYGLDQSLLQQLFTYLGNVVQGD
FGYSYYFNQPVLNLIAQRLPASLYLALSSLFTAVVIGTLLGVVSARRPNGALSHVVTVLSLTGYAAPIFWTGLMLLLLFG
SVWPVLPVSGMADVVNPKAGFAYALDVATHLVLPSLTLALVFIAQYSRLARVNMIDVLSADYVRTARAKGLPERVVIFKH
ALRNALIPIVTVVGHQFGNLFAGAVLVETVFSWPGMGRLVFDSILRRDYPTLMAVLFFSAVMVIAANIITDLVYRLVDPR
IRAGAR
>Mature_325_residues
TLLTHLFGKLANAAALLLAVLVLNFCLIHLAPGDPVQVIAGEMGGASAEVIAELRAKYGLDQSLLQQLFTYLGNVVQGDF
GYSYYFNQPVLNLIAQRLPASLYLALSSLFTAVVIGTLLGVVSARRPNGALSHVVTVLSLTGYAAPIFWTGLMLLLLFGS
VWPVLPVSGMADVVNPKAGFAYALDVATHLVLPSLTLALVFIAQYSRLARVNMIDVLSADYVRTARAKGLPERVVIFKHA
LRNALIPIVTVVGHQFGNLFAGAVLVETVFSWPGMGRLVFDSILRRDYPTLMAVLFFSAVMVIAANIITDLVYRLVDPRI
RAGAR

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789965, Length=337, Percent_Identity=39.7626112759644, Blast_Score=249, Evalue=1e-67,
Organism=Escherichia coli, GI1787053, Length=320, Percent_Identity=38.75, Blast_Score=224, Evalue=6e-60,
Organism=Escherichia coli, GI1787761, Length=341, Percent_Identity=38.41642228739, Blast_Score=191, Evalue=5e-50,
Organism=Escherichia coli, GI1787497, Length=321, Percent_Identity=32.398753894081, Blast_Score=182, Evalue=3e-47,
Organism=Escherichia coli, GI1789888, Length=307, Percent_Identity=31.9218241042345, Blast_Score=160, Evalue=9e-41,
Organism=Escherichia coli, GI1788504, Length=349, Percent_Identity=28.9398280802292, Blast_Score=146, Evalue=2e-36,
Organism=Escherichia coli, GI1787550, Length=273, Percent_Identity=28.2051282051282, Blast_Score=136, Evalue=2e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 35181; Mature: 35050

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLLTHLFGKLANAAALLLAVLVLNFCLIHLAPGDPVQVIAGEMGGASAEVIAELRAKYG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHHHHHHC
LDQSLLQQLFTYLGNVVQGDFGYSYYFNQPVLNLIAQRLPASLYLALSSLFTAVVIGTLL
CCHHHHHHHHHHHHHHHCCCCCCHHEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
GVVSARRPNGALSHVVTVLSLTGYAAPIFWTGLMLLLLFGSVWPVLPVSGMADVVNPKAG
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCC
FAYALDVATHLVLPSLTLALVFIAQYSRLARVNMIDVLSADYVRTARAKGLPERVVIFKH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ALRNALIPIVTVVGHQFGNLFAGAVLVETVFSWPGMGRLVFDSILRRDYPTLMAVLFFSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHH
VMVIAANIITDLVYRLVDPRIRAGAR
HHHHHHHHHHHHHHHHHCHHHHCCCC
>Mature Secondary Structure 
TLLTHLFGKLANAAALLLAVLVLNFCLIHLAPGDPVQVIAGEMGGASAEVIAELRAKYG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHHHHHHC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HHHHHHHHHHHHHHHHHCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]