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The map label for this gene is dppC [H]

Identifier: 86747257

GI number: 86747257

Start: 140460

End: 141380

Strand: Reverse

Name: dppC [H]

Synonym: RPB_0130

Alternate gene names: 86747257

Gene position: 141380-140460 (Counterclockwise)

Preceding gene: 86747258

Following gene: 86747256

Centisome position: 2.65

GC content: 69.16

Gene sequence:

>921_bases
ATGAGCACGCTCGACCAGACGCTGATCGTGGCGCAGACCGCGCCGCCGCCCGCGGCGCCGGGCGCACTGCCGGCCGCCAA
GGCGGTGTCGCCGGCCAGCGCCGCGTTTCGTCAATTTCTGAAGAGCCCGTCCGGCGTCGCCGGCGCGGTGCTGCTGATCG
TGCTGGTGTCGGGGACGTTGTTCGGGCCGTGGATCTATTCGCTCGACCCGCTGGAAATCGTCGGCCTGCCGTTCACGCCG
CCGTCCGCCGATGCCTGGCTCGGCACCGACTATCTCGGCCGCGACGTGCTCGCGGGGCTGGTGCATGGCGGCCGCGCGAC
GCTCACGGTCGGCGCCGTCGCGGCGCTGCTCACCATCGCCATCGGCGTGACGGTCGGCTCGCTGGCGGGTTTCTTCGGCG
GATGGATCGACAGCCTGCTGGTGAAGATCGCCGAATTCTTCCAGGTGCTGCCGCCGCTGTTGTTCGCGATGGTGCTGGTG
ACGCTGTTCGGGCCGAAACTCATGACCATCACGCTGGCGATCGGCGCGGTGAGCTGGACTTCGGCGGCGCGGCTGACGCG
CGCGGAATTCATGCGGCTGCGCGATCTCGATTTCATCAAGGCCTCGCGCGCCGCCGGCGCCGGCAATCTGCATCTGATCC
TGCGGGTGGTGCTGCCCAATGCGCTGCCGCCGATCATCGTGTCGGCGACGCTGGCGATCGGCGTCGCCATCCTGTTCGAG
GGCGGGCTGAGCTTCCTCGGCCTCGGCGATCCCAACACCATGAGCTGGGGCCTGATGATCGGCCAGAACCGCAACTACGT
GCTCGACGCCTGGTGGGCGGTGACCTTCCCCGGCGCCGCGATCTTCCTGTCGGTGCTGGCGATCAGCCTGGTCGGCGACG
GCATCAACGATGCGGTCAATCCGCGGCTGCGACGGAGGTGA

Upstream 100 bases:

>100_bases
TGGCGGTGCTGTTCTTCTCCGCGGTGATGGTGATCGCCGCCAATATCATCACCGACCTGGTGTATCGCCTGGTCGATCCA
CGTATCCGCGCGGGGGCCCG

Downstream 100 bases:

>100_bases
CGATGGCGCCGGTACTCGAGGTCGACAAGCTCAGCGTCAGCATGACCGATCGCCATGGCGACCTGGTCCCGGTGCTCGAG
AATCTGTCGTTCACCATCGA

Product: binding-protein dependent transport system inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MSTLDQTLIVAQTAPPPAAPGALPAAKAVSPASAAFRQFLKSPSGVAGAVLLIVLVSGTLFGPWIYSLDPLEIVGLPFTP
PSADAWLGTDYLGRDVLAGLVHGGRATLTVGAVAALLTIAIGVTVGSLAGFFGGWIDSLLVKIAEFFQVLPPLLFAMVLV
TLFGPKLMTITLAIGAVSWTSAARLTRAEFMRLRDLDFIKASRAAGAGNLHLILRVVLPNALPPIIVSATLAIGVAILFE
GGLSFLGLGDPNTMSWGLMIGQNRNYVLDAWWAVTFPGAAIFLSVLAISLVGDGINDAVNPRLRRR

Sequences:

>Translated_306_residues
MSTLDQTLIVAQTAPPPAAPGALPAAKAVSPASAAFRQFLKSPSGVAGAVLLIVLVSGTLFGPWIYSLDPLEIVGLPFTP
PSADAWLGTDYLGRDVLAGLVHGGRATLTVGAVAALLTIAIGVTVGSLAGFFGGWIDSLLVKIAEFFQVLPPLLFAMVLV
TLFGPKLMTITLAIGAVSWTSAARLTRAEFMRLRDLDFIKASRAAGAGNLHLILRVVLPNALPPIIVSATLAIGVAILFE
GGLSFLGLGDPNTMSWGLMIGQNRNYVLDAWWAVTFPGAAIFLSVLAISLVGDGINDAVNPRLRRR
>Mature_305_residues
STLDQTLIVAQTAPPPAAPGALPAAKAVSPASAAFRQFLKSPSGVAGAVLLIVLVSGTLFGPWIYSLDPLEIVGLPFTPP
SADAWLGTDYLGRDVLAGLVHGGRATLTVGAVAALLTIAIGVTVGSLAGFFGGWIDSLLVKIAEFFQVLPPLLFAMVLVT
LFGPKLMTITLAIGAVSWTSAARLTRAEFMRLRDLDFIKASRAAGAGNLHLILRVVLPNALPPIIVSATLAIGVAILFEG
GLSFLGLGDPNTMSWGLMIGQNRNYVLDAWWAVTFPGAAIFLSVLAISLVGDGINDAVNPRLRRR

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=263, Percent_Identity=37.6425855513308, Blast_Score=179, Evalue=2e-46,
Organism=Escherichia coli, GI1787054, Length=278, Percent_Identity=33.0935251798561, Blast_Score=159, Evalue=2e-40,
Organism=Escherichia coli, GI1789964, Length=254, Percent_Identity=40.1574803149606, Blast_Score=152, Evalue=2e-38,
Organism=Escherichia coli, GI1789889, Length=243, Percent_Identity=34.9794238683128, Blast_Score=138, Evalue=5e-34,
Organism=Escherichia coli, GI1787498, Length=274, Percent_Identity=32.4817518248175, Blast_Score=134, Evalue=6e-33,
Organism=Escherichia coli, GI1788505, Length=232, Percent_Identity=34.051724137931, Blast_Score=114, Evalue=9e-27,
Organism=Escherichia coli, GI1787549, Length=277, Percent_Identity=32.129963898917, Blast_Score=107, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31902; Mature: 31771

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLDQTLIVAQTAPPPAAPGALPAAKAVSPASAAFRQFLKSPSGVAGAVLLIVLVSGTL
CCCCCCEEEEEECCCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCHH
FGPWIYSLDPLEIVGLPFTPPSADAWLGTDYLGRDVLAGLVHGGRATLTVGAVAALLTIA
HCCHHCCCCCHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
IGVTVGSLAGFFGGWIDSLLVKIAEFFQVLPPLLFAMVLVTLFGPKLMTITLAIGAVSWT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
SAARLTRAEFMRLRDLDFIKASRAAGAGNLHLILRVVLPNALPPIIVSATLAIGVAILFE
HHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
GGLSFLGLGDPNTMSWGLMIGQNRNYVLDAWWAVTFPGAAIFLSVLAISLVGDGINDAVN
CCCCEEECCCCCCEEEEEEEECCCCEEEEEEHHHHCCHHHHHHHHHHHHHHCCCCCHHCC
PRLRRR
CHHCCC
>Mature Secondary Structure 
STLDQTLIVAQTAPPPAAPGALPAAKAVSPASAAFRQFLKSPSGVAGAVLLIVLVSGTL
CCCCCEEEEEECCCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCHH
FGPWIYSLDPLEIVGLPFTPPSADAWLGTDYLGRDVLAGLVHGGRATLTVGAVAALLTIA
HCCHHCCCCCHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
IGVTVGSLAGFFGGWIDSLLVKIAEFFQVLPPLLFAMVLVTLFGPKLMTITLAIGAVSWT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
SAARLTRAEFMRLRDLDFIKASRAAGAGNLHLILRVVLPNALPPIIVSATLAIGVAILFE
HHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
GGLSFLGLGDPNTMSWGLMIGQNRNYVLDAWWAVTFPGAAIFLSVLAISLVGDGINDAVN
CCCCEEECCCCCCEEEEEEEECCCCEEEEEEHHHHCCHHHHHHHHHHHHHHCCCCCHHCC
PRLRRR
CHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]