| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is ptsP [H]
Identifier: 86747203
GI number: 86747203
Start: 77432
End: 79699
Strand: Reverse
Name: ptsP [H]
Synonym: RPB_0076
Alternate gene names: 86747203
Gene position: 79699-77432 (Counterclockwise)
Preceding gene: 86747204
Following gene: 162138527
Centisome position: 1.49
GC content: 68.03
Gene sequence:
>2268_bases ATGCGGAGCACGTCGGGCGGCCCCCGCGTCTTGCTGAGACGGCTCCGTGAAACCATGGCGGAGCAAGTCTCCGCGCAGGA ACGCCTGGACAAGATCGTGGTGCTGATCGCCGCCAATATGGTGGCGGAGGTGTGCTCGACCTACGTCCTGCGGGTCGACA ATACGCTCGAACTCTACGCCACCGAAGGCCTCAACCGCGAGGCGGTGCACCAGACCGTGCTGACCGCGCATGAAGGCCTG GTCGGCCTCGTCGCCTCCGAGGCGACGCCGCTGAATCTCTCCGACGCGCAGAGCCATCCGGCGTTCTCGTTCCGCCCGGA GACCGGCGAAGAAATCTATCACTCCTTCCTCGGCGTGCCGATTCTGCGCGCCGGCAACACGCTCGGCGTGCTGGTGTTGC AGAACCGCGCCAAGCGCACCTATGTCGAGGAAGAGGTCGAGGCGCTGCAGACCACCGCGATGGTGCTCGCCGAAATGATC GCCTCGGGCGAATTGTCGGCGCTGGCGCAGCCCGGCGCCGAGCCCGCGGCACGGCACTCGATCCACAAGACCGGCGCGAT CCTGTCCGACGGCATCGCGCTCGGCCATGTCGTGCTGCACGAGCCGCGCGTCGTCATCACCAACTACATCGCCGAGGATC TGCCGAAGGAAATCAGGCGGCTCGACACCGCTTTGGCCAATCTGCGCGCCGATCTCGACCGTCTGCTGGAGCGCGGCGAC GTCGCCGACGGCGGCGAGCATCGCGACGTGCTCGAAGCCTACCGGATGTTCGCCAACGACCACGGCTGGTCGCACAAGCT GCACGAGGCGGTGGCCACCGGCCTCACCGCGGAAGCCGCCGTCGAGCGCGTGCAGTCCGACACACGGGCCCGGATGCTGC GCTCGACCGATCCGTATTTGCGCGACCGGCTGCACGATCTCGAGGACCTCGGCCACCGGCTGATGCGCCAGCTGGTCGGC CAGAATCACGCACCGTCCCGCGAGCAATTGCCCGACAACGCCATCCTGATCGCGCGCTCGATGGGCCCGGCGGCGCTGCT CGACTACGACCGCAAGAGGCTGCGCGGCCTGGTGCTCGAAGAGGGCACCGCGAATTCGCACGTCTCGATCGTGGCGCGCG CGCTCGGCATTGCGGCGATCGGCGAAGTGCCGAACGCGCCGGGCATCGCCGATCCGGGCGACGCGATCATCGTCGATGCC ACCTCCGGCTCGATCTATGTCCGCCCCTCCGCGGAGGTCGAGGCCGCCTATGCCGAGCGGGTGCGCTTTCGCGCGCGGCG CCAGGCGCAGTATTCCGCGCTGCGCGATCTCGCCTGCGTCACCACCGACGGCCAGCCGATCGACCTGATGATCAATGCCG GTCTGGCGATCGACCTGCCGCATATCGACGACACCGGCTCGTCCGGCGTCGGCCTGTTCCGCACCGAGCTGCAGTTCATG ATCGGCCAGAGCCTGCCGCGCTCCAGCGATCAGCTCGCGCTGTACCGCGCCGTGCTCGATGCCGCGGGATCCAAGCCGGT GACCTTCCGCACGCTCGATATCGGCGGCGACAAGGCGCTGCCCTATATGGAAACCGTGGTCGAGGAGAATCCTGCGCTCG GCTGGCGGGCGATCCGGCTCGGGCTGGACCGGCCGGGCCTGCTGCGCAGCCAGATCCGGGCGCTGTTGCGCGCCGGCGGC GGGCGCAATCTGCGCATCATGTTTCCGATGATCTCGGAAGTCGCCGAATTCGACGCCGCCAAGGCGATCGTCGAGCGCGA ACTGACCTATCTGCGCCAGCACGGCCACACGCTGCCGGAGCGGGTCGACGTCGGCACCATGGTCGAAGTGCCGGCGCTGC TGTATCAGCTCGACGAACTGTTCAAGAAGGTCGACTTCATTTCGGTCGGCTCCAACGATCTGTTCCAGTTTTTGTATGCG GTCGACCGCGGCAACGCCAAGGTGTCGGACCGCTTCGACACACTGTCGGCCCCCATCCTGCGGGCGCTGCGCGACATCGT GCGCAAGGCCAAGGCCGCCAAGCGCTCGGTGTCGCTGTGCGGCGAGATGGCGTCGCAGCCGCTGGGGGCGCTGGCGCTGA TCGCGATCGGCTATCGGGCGCTGTCGGTGTCGGCGGTGTCGCACGGCCCGGTCAAGGCGATGATCCTCGAACTCGACGCT GCCAAGGCCGAGGCGGCGATCTCGCCGTTGCTCGATGCGCCCGCCGGCAGCGTCTCGATCCGGCACAAGCTCGCGGAATT CGCCGAGGCTCACGGGCTGTCCTTGTAG
Upstream 100 bases:
>100_bases GAGGCCGGGCGGATTGTCGTCCGGCGCGATCGCGTCGAGAGGTTTGTCGCCGGCACCGCAGGCCGGCGGCTATGACGATT TTCAGAGGAGATGTCTTCAC
Downstream 100 bases:
>100_bases CGACGCTGTTGTCCGCGCCGCCGCGTCGCCACCATCCTTGCCATTCTCGCATTTCGTTGTCCGAGACCGATCGATGTCCA ACCTGCCCGAAGCCAAGCTC
Product: phosphoenolpyruvate-protein phosphotransferase PtsP
Products: NA
Alternate protein names: Enzyme I-Ntr; Phosphotransferase system, enzyme I [H]
Number of amino acids: Translated: 755; Mature: 755
Protein sequence:
>755_residues MRSTSGGPRVLLRRLRETMAEQVSAQERLDKIVVLIAANMVAEVCSTYVLRVDNTLELYATEGLNREAVHQTVLTAHEGL VGLVASEATPLNLSDAQSHPAFSFRPETGEEIYHSFLGVPILRAGNTLGVLVLQNRAKRTYVEEEVEALQTTAMVLAEMI ASGELSALAQPGAEPAARHSIHKTGAILSDGIALGHVVLHEPRVVITNYIAEDLPKEIRRLDTALANLRADLDRLLERGD VADGGEHRDVLEAYRMFANDHGWSHKLHEAVATGLTAEAAVERVQSDTRARMLRSTDPYLRDRLHDLEDLGHRLMRQLVG QNHAPSREQLPDNAILIARSMGPAALLDYDRKRLRGLVLEEGTANSHVSIVARALGIAAIGEVPNAPGIADPGDAIIVDA TSGSIYVRPSAEVEAAYAERVRFRARRQAQYSALRDLACVTTDGQPIDLMINAGLAIDLPHIDDTGSSGVGLFRTELQFM IGQSLPRSSDQLALYRAVLDAAGSKPVTFRTLDIGGDKALPYMETVVEENPALGWRAIRLGLDRPGLLRSQIRALLRAGG GRNLRIMFPMISEVAEFDAAKAIVERELTYLRQHGHTLPERVDVGTMVEVPALLYQLDELFKKVDFISVGSNDLFQFLYA VDRGNAKVSDRFDTLSAPILRALRDIVRKAKAAKRSVSLCGEMASQPLGALALIAIGYRALSVSAVSHGPVKAMILELDA AKAEAAISPLLDAPAGSVSIRHKLAEFAEAHGLSL
Sequences:
>Translated_755_residues MRSTSGGPRVLLRRLRETMAEQVSAQERLDKIVVLIAANMVAEVCSTYVLRVDNTLELYATEGLNREAVHQTVLTAHEGL VGLVASEATPLNLSDAQSHPAFSFRPETGEEIYHSFLGVPILRAGNTLGVLVLQNRAKRTYVEEEVEALQTTAMVLAEMI ASGELSALAQPGAEPAARHSIHKTGAILSDGIALGHVVLHEPRVVITNYIAEDLPKEIRRLDTALANLRADLDRLLERGD VADGGEHRDVLEAYRMFANDHGWSHKLHEAVATGLTAEAAVERVQSDTRARMLRSTDPYLRDRLHDLEDLGHRLMRQLVG QNHAPSREQLPDNAILIARSMGPAALLDYDRKRLRGLVLEEGTANSHVSIVARALGIAAIGEVPNAPGIADPGDAIIVDA TSGSIYVRPSAEVEAAYAERVRFRARRQAQYSALRDLACVTTDGQPIDLMINAGLAIDLPHIDDTGSSGVGLFRTELQFM IGQSLPRSSDQLALYRAVLDAAGSKPVTFRTLDIGGDKALPYMETVVEENPALGWRAIRLGLDRPGLLRSQIRALLRAGG GRNLRIMFPMISEVAEFDAAKAIVERELTYLRQHGHTLPERVDVGTMVEVPALLYQLDELFKKVDFISVGSNDLFQFLYA VDRGNAKVSDRFDTLSAPILRALRDIVRKAKAAKRSVSLCGEMASQPLGALALIAIGYRALSVSAVSHGPVKAMILELDA AKAEAAISPLLDAPAGSVSIRHKLAEFAEAHGLSL >Mature_755_residues MRSTSGGPRVLLRRLRETMAEQVSAQERLDKIVVLIAANMVAEVCSTYVLRVDNTLELYATEGLNREAVHQTVLTAHEGL VGLVASEATPLNLSDAQSHPAFSFRPETGEEIYHSFLGVPILRAGNTLGVLVLQNRAKRTYVEEEVEALQTTAMVLAEMI ASGELSALAQPGAEPAARHSIHKTGAILSDGIALGHVVLHEPRVVITNYIAEDLPKEIRRLDTALANLRADLDRLLERGD VADGGEHRDVLEAYRMFANDHGWSHKLHEAVATGLTAEAAVERVQSDTRARMLRSTDPYLRDRLHDLEDLGHRLMRQLVG QNHAPSREQLPDNAILIARSMGPAALLDYDRKRLRGLVLEEGTANSHVSIVARALGIAAIGEVPNAPGIADPGDAIIVDA TSGSIYVRPSAEVEAAYAERVRFRARRQAQYSALRDLACVTTDGQPIDLMINAGLAIDLPHIDDTGSSGVGLFRTELQFM IGQSLPRSSDQLALYRAVLDAAGSKPVTFRTLDIGGDKALPYMETVVEENPALGWRAIRLGLDRPGLLRSQIRALLRAGG GRNLRIMFPMISEVAEFDAAKAIVERELTYLRQHGHTLPERVDVGTMVEVPALLYQLDELFKKVDFISVGSNDLFQFLYA VDRGNAKVSDRFDTLSAPILRALRDIVRKAKAAKRSVSLCGEMASQPLGALALIAIGYRALSVSAVSHGPVKAMILELDA AKAEAAISPLLDAPAGSVSIRHKLAEFAEAHGLSL
Specific function: Component of the phosphoenolpyruvate-dependent nitrogen- metabolic phosphotransferase system (nitrogen-metabolic PTS), that seems to be involved in regulating nitrogen metabolism. Enzyme I- Ntr transfers the phosphoryl group from phosphoenolpyruvate (PEP)
COG id: COG3605
COG function: function code T; Signal transduction protein containing GAF and PtsI domains
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GAF domain [H]
Homologues:
Organism=Escherichia coli, GI1789193, Length=753, Percent_Identity=35.4581673306773, Blast_Score=390, Evalue=1e-109, Organism=Escherichia coli, GI1788756, Length=539, Percent_Identity=34.6938775510204, Blast_Score=302, Evalue=4e-83, Organism=Escherichia coli, GI1788726, Length=539, Percent_Identity=31.9109461966605, Blast_Score=267, Evalue=2e-72, Organism=Escherichia coli, GI48994992, Length=499, Percent_Identity=32.2645290581162, Blast_Score=258, Evalue=9e-70,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003018 - InterPro: IPR008279 - InterPro: IPR006318 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR008731 - InterPro: IPR015813 [H]
Pfam domain/function: PF01590 GAF; PF05524 PEP-utilisers_N; PF00391 PEP-utilizers; PF02896 PEP-utilizers_C [H]
EC number: =2.7.3.9 [H]
Molecular weight: Translated: 81967; Mature: 81967
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: PS00742 PEP_ENZYMES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSTSGGPRVLLRRLRETMAEQVSAQERLDKIVVLIAANMVAEVCSTYVLRVDNTLELYA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEE TEGLNREAVHQTVLTAHEGLVGLVASEATPLNLSDAQSHPAFSFRPETGEEIYHSFLGVP ECCCCHHHHHHHHHHHHCCHHEEHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCH ILRAGNTLGVLVLQNRAKRTYVEEEVEALQTTAMVLAEMIASGELSALAQPGAEPAARHS HEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHH IHKTGAILSDGIALGHVVLHEPRVVITNYIAEDLPKEIRRLDTALANLRADLDRLLERGD HHHHCCHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VADGGEHRDVLEAYRMFANDHGWSHKLHEAVATGLTAEAAVERVQSDTRARMLRSTDPYL CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHH RDRLHDLEDLGHRLMRQLVGQNHAPSREQLPDNAILIARSMGPAALLDYDRKRLRGLVLE HHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHEE EGTANSHVSIVARALGIAAIGEVPNAPGIADPGDAIIVDATSGSIYVRPSAEVEAAYAER CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCEEEECCCCHHHHHHHHH VRFRARRQAQYSALRDLACVTTDGQPIDLMINAGLAIDLPHIDDTGSSGVGLFRTELQFM HHHHHHHHHHHHHHHHHHEEECCCCCEEEEEECCEEEECCCCCCCCCCCCHHHHHHHHHH IGQSLPRSSDQLALYRAVLDAAGSKPVTFRTLDIGGDKALPYMETVVEENPALGWRAIRL HHCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCEEEEE GLDRPGLLRSQIRALLRAGGGRNLRIMFPMISEVAEFDAAKAIVERELTYLRQHGHTLPE CCCCCCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH RVDVGTMVEVPALLYQLDELFKKVDFISVGSNDLFQFLYAVDRGNAKVSDRFDTLSAPIL HCCCCHHHHHHHHHHHHHHHHHHHCEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH RALRDIVRKAKAAKRSVSLCGEMASQPLGALALIAIGYRALSVSAVSHGPVKAMILELDA HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEECCCCCCCEEEEEEHHH AKAEAAISPLLDAPAGSVSIRHKLAEFAEAHGLSL HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRSTSGGPRVLLRRLRETMAEQVSAQERLDKIVVLIAANMVAEVCSTYVLRVDNTLELYA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEE TEGLNREAVHQTVLTAHEGLVGLVASEATPLNLSDAQSHPAFSFRPETGEEIYHSFLGVP ECCCCHHHHHHHHHHHHCCHHEEHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCH ILRAGNTLGVLVLQNRAKRTYVEEEVEALQTTAMVLAEMIASGELSALAQPGAEPAARHS HEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHH IHKTGAILSDGIALGHVVLHEPRVVITNYIAEDLPKEIRRLDTALANLRADLDRLLERGD HHHHCCHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VADGGEHRDVLEAYRMFANDHGWSHKLHEAVATGLTAEAAVERVQSDTRARMLRSTDPYL CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHH RDRLHDLEDLGHRLMRQLVGQNHAPSREQLPDNAILIARSMGPAALLDYDRKRLRGLVLE HHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHEE EGTANSHVSIVARALGIAAIGEVPNAPGIADPGDAIIVDATSGSIYVRPSAEVEAAYAER CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCEEEECCCCHHHHHHHHH VRFRARRQAQYSALRDLACVTTDGQPIDLMINAGLAIDLPHIDDTGSSGVGLFRTELQFM HHHHHHHHHHHHHHHHHHEEECCCCCEEEEEECCEEEECCCCCCCCCCCCHHHHHHHHHH IGQSLPRSSDQLALYRAVLDAAGSKPVTFRTLDIGGDKALPYMETVVEENPALGWRAIRL HHCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCEEEEE GLDRPGLLRSQIRALLRAGGGRNLRIMFPMISEVAEFDAAKAIVERELTYLRQHGHTLPE CCCCCCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH RVDVGTMVEVPALLYQLDELFKKVDFISVGSNDLFQFLYAVDRGNAKVSDRFDTLSAPIL HCCCCHHHHHHHHHHHHHHHHHHHCEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH RALRDIVRKAKAAKRSVSLCGEMASQPLGALALIAIGYRALSVSAVSHGPVKAMILELDA HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEECCCCCCCEEEEEEHHH AKAEAAISPLLDAPAGSVSIRHKLAEFAEAHGLSL HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503; 7896715; 8973315 [H]