Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
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Accession | NC_007776 |
Length | 3,046,682 |
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The map label for this gene is 86609147
Identifier: 86609147
GI number: 86609147
Start: 1762379
End: 1763188
Strand: Reverse
Name: 86609147
Synonym: CYB_1686
Alternate gene names: NA
Gene position: 1763188-1762379 (Counterclockwise)
Preceding gene: 86609153
Following gene: 86609143
Centisome position: 57.87
GC content: 59.26
Gene sequence:
>810_bases ATGTCTTACTCAACCTCTTACTCCGTGTCTTACTCGAAAATCTTTTTCCCAGTTTGGGTGGCGGGGCTGCTGTTGTTGAT TGGCGGTGGGATCCTGTTTGTCCTGCTGCGGGCTTTTGGGCTACCCATTGGGGAGCTGGCCGACTGGGCCATTGGGATCG CCAGCTTTTGGTGGCTGGTGGTGATCGTCACCCTTCCCTGGAACCTCTACTTTCAGGCCAAGGCCGTTCAGCAGGAGGCG GTTGTGTCTCAGGAACGAGGGATCCCGGTGGAAGATTCAACCTTGGCTTTCCTACAAAAGCTCAGCTGCTGGTCGTTGCG CGTGGCCATTGCCCTGCATGGGCTGTCGGCTCTAGCTTTCTATGGCTTGGCCGTTGGGCAAGTCACCCCCATTGGCTACC CCAGCGCCGTGGCTGCGGTGTTGTTGACGGCTCTGCGCCCGGCCATCCGCGGCTACGAGTATTTGGCCGACCGCTTGGCC CAGTTGCAAGGGCAAATCCGCATCCCTCGCGAAGATGCCCTCGAGCTGGCGGAACGACTAGAGCAGTTGCAGCGCCAAGT CGAGCAGTTGCAGGAGCAATGGGATCCCGGCAAACCTGGCTCTTGGGCCCAACAAGAGGAAGAAACCCGGCGCTACCTAC GGCAGGAGCTGGCCGCGCTCAAAGCCCAACTGGAACAGTTGCGGGCCAGCAACGAGCTGGAGCACAGGCAATTGCGCCAG GAGACCCACCAAGCTGTGGCTCAGCTCAGTGTGGATAGCCAGTTTCTCGGCCATGTGCGGGAGATTCTTCGCTTTATCAA GGAAGCTTAG
Upstream 100 bases:
>100_bases CCCTAATGGCTCTGGGACGGACGGAAAACTGGCCGCTTCAGGAGCTTCTGGCCGCTCGGTTCGGGCAGGCTGTAGGCAGC TTGATGAGGAGAAACCGGCA
Downstream 100 bases:
>100_bases CGGGATCCGTTGTTCAGTCCTTCCAACTGAGCGGAAAACTGAGAAGGAACAAGCTTGGTGCCCACCCCGGCATCGGTCAG CAGCTCCAGCAATAGGGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MSYSTSYSVSYSKIFFPVWVAGLLLLIGGGILFVLLRAFGLPIGELADWAIGIASFWWLVVIVTLPWNLYFQAKAVQQEA VVSQERGIPVEDSTLAFLQKLSCWSLRVAIALHGLSALAFYGLAVGQVTPIGYPSAVAAVLLTALRPAIRGYEYLADRLA QLQGQIRIPREDALELAERLEQLQRQVEQLQEQWDPGKPGSWAQQEEETRRYLRQELAALKAQLEQLRASNELEHRQLRQ ETHQAVAQLSVDSQFLGHVREILRFIKEA
Sequences:
>Translated_269_residues MSYSTSYSVSYSKIFFPVWVAGLLLLIGGGILFVLLRAFGLPIGELADWAIGIASFWWLVVIVTLPWNLYFQAKAVQQEA VVSQERGIPVEDSTLAFLQKLSCWSLRVAIALHGLSALAFYGLAVGQVTPIGYPSAVAAVLLTALRPAIRGYEYLADRLA QLQGQIRIPREDALELAERLEQLQRQVEQLQEQWDPGKPGSWAQQEEETRRYLRQELAALKAQLEQLRASNELEHRQLRQ ETHQAVAQLSVDSQFLGHVREILRFIKEA >Mature_268_residues SYSTSYSVSYSKIFFPVWVAGLLLLIGGGILFVLLRAFGLPIGELADWAIGIASFWWLVVIVTLPWNLYFQAKAVQQEAV VSQERGIPVEDSTLAFLQKLSCWSLRVAIALHGLSALAFYGLAVGQVTPIGYPSAVAAVLLTALRPAIRGYEYLADRLAQ LQGQIRIPREDALELAERLEQLQRQVEQLQEQWDPGKPGSWAQQEEETRRYLRQELAALKAQLEQLRASNELEHRQLRQE THQAVAQLSVDSQFLGHVREILRFIKEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30297; Mature: 30166
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYSTSYSVSYSKIFFPVWVAGLLLLIGGGILFVLLRAFGLPIGELADWAIGIASFWWLV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH VIVTLPWNLYFQAKAVQQEAVVSQERGIPVEDSTLAFLQKLSCWSLRVAIALHGLSALAF HHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YGLAVGQVTPIGYPSAVAAVLLTALRPAIRGYEYLADRLAQLQGQIRIPREDALELAERL HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH EQLQRQVEQLQEQWDPGKPGSWAQQEEETRRYLRQELAALKAQLEQLRASNELEHRQLRQ HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH ETHQAVAQLSVDSQFLGHVREILRFIKEA HHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SYSTSYSVSYSKIFFPVWVAGLLLLIGGGILFVLLRAFGLPIGELADWAIGIASFWWLV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH VIVTLPWNLYFQAKAVQQEAVVSQERGIPVEDSTLAFLQKLSCWSLRVAIALHGLSALAF HHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YGLAVGQVTPIGYPSAVAAVLLTALRPAIRGYEYLADRLAQLQGQIRIPREDALELAERL HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH EQLQRQVEQLQEQWDPGKPGSWAQQEEETRRYLRQELAALKAQLEQLRASNELEHRQLRQ HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH ETHQAVAQLSVDSQFLGHVREILRFIKEA HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA