Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609087

Identifier: 86609087

GI number: 86609087

Start: 1697422

End: 1697934

Strand: Reverse

Name: 86609087

Synonym: CYB_1625

Alternate gene names: NA

Gene position: 1697934-1697422 (Counterclockwise)

Preceding gene: 86609088

Following gene: 86609086

Centisome position: 55.73

GC content: 61.6

Gene sequence:

>513_bases
ATGACGCTTCCCAAAGACCTGAGATTGTCTCAGCACTTGGCTCTGATCCAGTTGAGGTTCGAGCGAGGACAATACCGGCA
GGCGCTAGAGGAGGTTAAGCAGGCCCAAAGCCGCTATCCGCAGTCGGGTAAGCTACGGCTCTGGCAGGCCCTGGCCCAAG
AAGCCCTTGGCGAAACGCAGGAGGCCATCCTGTTGGCCCAAACCTTGCTGCGCAACCCAGATCCAGAAGTTGCCCAGCAG
GCTCGCTATGTCTTGGGTATCTGGCAAGCCCCTCGTCTGCGGCGTCCAGCGGAGTGGTTGAGCGAAATTCCCGATCTCAG
CCGGCTGGAGGAAGCTGATCCCCCAGAGTACCGCTTGGCCTATGGGCGCTCCCAACGCAAAGGCCCTTCCCCAAGATCTG
GGGATCCCCTCAGCCGCCGGGCAGCGGATCCCCCGTTGGACACTAAGCCCCTCATCTGGGTGTTGATCGGGATCCTCTCG
ACCCTGCTGGCCGTGATGGCTTGGCTGCCCTAG

Upstream 100 bases:

>100_bases
CTTACCTACCAACGTCCCCCTCAGGGTCAGCCTTTGCAGGAGCTGTTGCTGGTGGGGTTTGGGGTAGAACAGAAGCTGAC
CTAGCCTGCGGATCCTGAGC

Downstream 100 bases:

>100_bases
AGGGGGGTATAACCCTCGCCGCTGCTGGGTTAGTGGGGAGATACTGGGAGTAGAGGAAACGATAGGTCTAGCTCAGGGGA
GCGGATCTGCGTCCAGGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MTLPKDLRLSQHLALIQLRFERGQYRQALEEVKQAQSRYPQSGKLRLWQALAQEALGETQEAILLAQTLLRNPDPEVAQQ
ARYVLGIWQAPRLRRPAEWLSEIPDLSRLEEADPPEYRLAYGRSQRKGPSPRSGDPLSRRAADPPLDTKPLIWVLIGILS
TLLAVMAWLP

Sequences:

>Translated_170_residues
MTLPKDLRLSQHLALIQLRFERGQYRQALEEVKQAQSRYPQSGKLRLWQALAQEALGETQEAILLAQTLLRNPDPEVAQQ
ARYVLGIWQAPRLRRPAEWLSEIPDLSRLEEADPPEYRLAYGRSQRKGPSPRSGDPLSRRAADPPLDTKPLIWVLIGILS
TLLAVMAWLP
>Mature_169_residues
TLPKDLRLSQHLALIQLRFERGQYRQALEEVKQAQSRYPQSGKLRLWQALAQEALGETQEAILLAQTLLRNPDPEVAQQA
RYVLGIWQAPRLRRPAEWLSEIPDLSRLEEADPPEYRLAYGRSQRKGPSPRSGDPLSRRAADPPLDTKPLIWVLIGILST
LLAVMAWLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19391; Mature: 19259

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLPKDLRLSQHLALIQLRFERGQYRQALEEVKQAQSRYPQSGKLRLWQALAQEALGETQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHH
EAILLAQTLLRNPDPEVAQQARYVLGIWQAPRLRRPAEWLSEIPDLSRLEEADPPEYRLA
HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHCCCCCHHHHH
YGRSQRKGPSPRSGDPLSRRAADPPLDTKPLIWVLIGILSTLLAVMAWLP
HCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TLPKDLRLSQHLALIQLRFERGQYRQALEEVKQAQSRYPQSGKLRLWQALAQEALGETQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHH
EAILLAQTLLRNPDPEVAQQARYVLGIWQAPRLRRPAEWLSEIPDLSRLEEADPPEYRLA
HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHCCCCCHHHHH
YGRSQRKGPSPRSGDPLSRRAADPPLDTKPLIWVLIGILSTLLAVMAWLP
HCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA