Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
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Accession | NC_007776 |
Length | 3,046,682 |
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The map label for this gene is 86609086
Identifier: 86609086
GI number: 86609086
Start: 1695937
End: 1697277
Strand: Reverse
Name: 86609086
Synonym: CYB_1624
Alternate gene names: NA
Gene position: 1697277-1695937 (Counterclockwise)
Preceding gene: 86609087
Following gene: 86609084
Centisome position: 55.71
GC content: 59.06
Gene sequence:
>1341_bases GTGGCTACACAAACATTGGTGATGGATGCAGTGGAGCAGTTGGGCCTGCGGGTCACGCTGGGAGATATTGCATCCAGCAC GGGCTTGGCTCTACACGAGGCCAAACAAGAGCTGCTGAATTTGGCCCAAAAGGCGGAGGGGCATCTCCAGGTTTCCCGGC AGGGGGAGATTACCTATGTTTTCCCGCCGGATTTTCGCAGCATTCTCAAGCGCAAGGAGCAGCAGGATCGGCTAGCAGCC CTGCGTCGCCGGTTGTGGGGGGGCTTCCTCTATGGGTTGCGCATCTCCTTTGGCATTCTGCTGGTGGTGTCGATTGTCTT GATCGTCCTGGCGTTGATTGCCTTGCAGATGGCCAGTAGCCGCGAGCAGGACAATCGCAGCCGATCGCGGGGGATAGGGT TTTACTACTTCCCCAATCTTTGGATCGGCAACCCCTTCTGGGATCCCTATCCCTACTATGGCAGCTACTCCGGTCGGACG CGCCCCCGCCAGCCGCAAAAATCCGAGCTGAACTTCCTGGAAGCGGTGTACAGCTTCCTCTTTGGGGACGGGGATCCCAA TGCCAACCTGGAGGAGGAGCGCTATGCCCTCATTGGCCAACTGATTCGTGCCAATGGGGGGGTGATCGCAGCGGAACAGG TGTTGCCCTACCTGGATGTGGAGCCAGGATCCCCGGCCTTGGAATACGAAGATTACATGCTGCCCATTTTGCTCAAGTTC GACGGCCAGCCGGAGGTCAGCGAGGATGGGGACATTGTCTACCGCTTCCCAGAGCTGCAGGTGGCCGCCTCAGAGCGCAA GCCCAAGGGGATCCCTGAGGTGTTGCAGGAGAAACCTTGGGTGTTCAGCCGGGCCACGCCTGGTCAACTGACCCTGGCAG GAGGCTTGGGAGTTCTCAATTTCTTTCTGGCCGCCATTCTCTATGGGGCACGGGAGGAGGTGGCAGCGGCAGCCGGCAGC AATGCTTTTTTAGCCTTCATCTACCCGTTGATTGGGTTTCTGTTTCTCTACGGCAGCCTCTTTTTGGCGGTGCCCGCCGT TCGCTGGCTAGCCTTGCAAATCCGCAACCAGGGAGTGGAGCGTCGCAATCGTGTCCGGCAGCTTTGGCGAGAGCATCTGC AGCATCCCACAGAGGCGCTGCTGCGCAAACTCAACTTTGCCCGCCGCTTCCGCCGTCAGGGAGTTGTGCCAGAGTCAGAC ACCATTTACTCAACCGATCGGGATTTGATCGAGCAGCGGGACTACCGTCTGGACGAGCCGGCATTCCGCCAACTTTTGGA ATCCAAAGCTCAGCAGGATCGCCCCGAAACCGAACAAGTGCGCAAGCCGCGTCCCCTCTAG
Upstream 100 bases:
>100_bases TGGGAGTAGAGGAAACGATAGGTCTAGCTCAGGGGAGCGGATCTGCGTCCAGGGATCCCAAAGGCTCCTCGACAATGGGG GCGGAAAGCGGAGGTTAAGA
Downstream 100 bases:
>100_bases AGAGGTCATGGCCGTTGGGCAAACTCCCGGTCTGCCGTTTGAGCTGAGACCCATTCGAGTTTCTTGCCCAGCCGGAGAAT CCGGCGCTTGGGTTTGCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 446; Mature: 445
Protein sequence:
>446_residues MATQTLVMDAVEQLGLRVTLGDIASSTGLALHEAKQELLNLAQKAEGHLQVSRQGEITYVFPPDFRSILKRKEQQDRLAA LRRRLWGGFLYGLRISFGILLVVSIVLIVLALIALQMASSREQDNRSRSRGIGFYYFPNLWIGNPFWDPYPYYGSYSGRT RPRQPQKSELNFLEAVYSFLFGDGDPNANLEEERYALIGQLIRANGGVIAAEQVLPYLDVEPGSPALEYEDYMLPILLKF DGQPEVSEDGDIVYRFPELQVAASERKPKGIPEVLQEKPWVFSRATPGQLTLAGGLGVLNFFLAAILYGAREEVAAAAGS NAFLAFIYPLIGFLFLYGSLFLAVPAVRWLALQIRNQGVERRNRVRQLWREHLQHPTEALLRKLNFARRFRRQGVVPESD TIYSTDRDLIEQRDYRLDEPAFRQLLESKAQQDRPETEQVRKPRPL
Sequences:
>Translated_446_residues MATQTLVMDAVEQLGLRVTLGDIASSTGLALHEAKQELLNLAQKAEGHLQVSRQGEITYVFPPDFRSILKRKEQQDRLAA LRRRLWGGFLYGLRISFGILLVVSIVLIVLALIALQMASSREQDNRSRSRGIGFYYFPNLWIGNPFWDPYPYYGSYSGRT RPRQPQKSELNFLEAVYSFLFGDGDPNANLEEERYALIGQLIRANGGVIAAEQVLPYLDVEPGSPALEYEDYMLPILLKF DGQPEVSEDGDIVYRFPELQVAASERKPKGIPEVLQEKPWVFSRATPGQLTLAGGLGVLNFFLAAILYGAREEVAAAAGS NAFLAFIYPLIGFLFLYGSLFLAVPAVRWLALQIRNQGVERRNRVRQLWREHLQHPTEALLRKLNFARRFRRQGVVPESD TIYSTDRDLIEQRDYRLDEPAFRQLLESKAQQDRPETEQVRKPRPL >Mature_445_residues ATQTLVMDAVEQLGLRVTLGDIASSTGLALHEAKQELLNLAQKAEGHLQVSRQGEITYVFPPDFRSILKRKEQQDRLAAL RRRLWGGFLYGLRISFGILLVVSIVLIVLALIALQMASSREQDNRSRSRGIGFYYFPNLWIGNPFWDPYPYYGSYSGRTR PRQPQKSELNFLEAVYSFLFGDGDPNANLEEERYALIGQLIRANGGVIAAEQVLPYLDVEPGSPALEYEDYMLPILLKFD GQPEVSEDGDIVYRFPELQVAASERKPKGIPEVLQEKPWVFSRATPGQLTLAGGLGVLNFFLAAILYGAREEVAAAAGSN AFLAFIYPLIGFLFLYGSLFLAVPAVRWLALQIRNQGVERRNRVRQLWREHLQHPTEALLRKLNFARRFRRQGVVPESDT IYSTDRDLIEQRDYRLDEPAFRQLLESKAQQDRPETEQVRKPRPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50717; Mature: 50586
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATQTLVMDAVEQLGLRVTLGDIASSTGLALHEAKQELLNLAQKAEGHLQVSRQGEITYV CCCHHHHHHHHHHCCCEEEEHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEE FPPDFRSILKRKEQQDRLAALRRRLWGGFLYGLRISFGILLVVSIVLIVLALIALQMASS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC REQDNRSRSRGIGFYYFPNLWIGNPFWDPYPYYGSYSGRTRPRQPQKSELNFLEAVYSFL CCHHHHHHHCCCCEEECCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH FGDGDPNANLEEERYALIGQLIRANGGVIAAEQVLPYLDVEPGSPALEYEDYMLPILLKF HCCCCCCCCCHHHHHHHHHHHHHCCCCEEEHHHCCCCEECCCCCCCCCCCCCEEEEEEEE DGQPEVSEDGDIVYRFPELQVAASERKPKGIPEVLQEKPWVFSRATPGQLTLAGGLGVLN CCCCCCCCCCCEEEECCCCEEECCCCCCCCCHHHHHCCCCEEECCCCCCEEEECHHHHHH FFLAAILYGAREEVAAAAGSNAFLAFIYPLIGFLFLYGSLFLAVPAVRWLALQIRNQGVE HHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH RRNRVRQLWREHLQHPTEALLRKLNFARRFRRQGVVPESDTIYSTDRDLIEQRDYRLDEP HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHCCCCCCH AFRQLLESKAQQDRPETEQVRKPRPL HHHHHHHHHHHCCCCCHHHHCCCCCC >Mature Secondary Structure ATQTLVMDAVEQLGLRVTLGDIASSTGLALHEAKQELLNLAQKAEGHLQVSRQGEITYV CCHHHHHHHHHHCCCEEEEHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEE FPPDFRSILKRKEQQDRLAALRRRLWGGFLYGLRISFGILLVVSIVLIVLALIALQMASS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC REQDNRSRSRGIGFYYFPNLWIGNPFWDPYPYYGSYSGRTRPRQPQKSELNFLEAVYSFL CCHHHHHHHCCCCEEECCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH FGDGDPNANLEEERYALIGQLIRANGGVIAAEQVLPYLDVEPGSPALEYEDYMLPILLKF HCCCCCCCCCHHHHHHHHHHHHHCCCCEEEHHHCCCCEECCCCCCCCCCCCCEEEEEEEE DGQPEVSEDGDIVYRFPELQVAASERKPKGIPEVLQEKPWVFSRATPGQLTLAGGLGVLN CCCCCCCCCCCEEEECCCCEEECCCCCCCCCHHHHHCCCCEEECCCCCCEEEECHHHHHH FFLAAILYGAREEVAAAAGSNAFLAFIYPLIGFLFLYGSLFLAVPAVRWLALQIRNQGVE HHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH RRNRVRQLWREHLQHPTEALLRKLNFARRFRRQGVVPESDTIYSTDRDLIEQRDYRLDEP HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHCCCCCCH AFRQLLESKAQQDRPETEQVRKPRPL HHHHHHHHHHHCCCCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA