Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

Click here to switch to the map view.

The map label for this gene is 86609077

Identifier: 86609077

GI number: 86609077

Start: 1687951

End: 1688121

Strand: Reverse

Name: 86609077

Synonym: CYB_1614

Alternate gene names: NA

Gene position: 1688121-1687951 (Counterclockwise)

Preceding gene: 86609078

Following gene: 86609076

Centisome position: 55.41

GC content: 61.99

Gene sequence:

>171_bases
ATGCTAAACTCGGTGGACTGGGATCCCTCGGGGGCGGTTAGCTCAGCGGTAGAGCGCCTGCCTTACAAGCAGGATGTCAC
TGGTTCGAGTCCGGTACCGCCCATCCCCATCCAGGCTGGCAGTTTGGGGGATACACCCGCTAGCCAGGGCCGGATCCCTG
AGGTAGAGTAG

Upstream 100 bases:

>100_bases
ATGCAGCAGGTGGAGATCTGCATTGCCCCTTCCCTCCTGACCGAGGGCAAGGTGTACCAGAAGGCGCAGAGCTTGGGTAT
GGGGAAATAGTCCTTTGGGA

Downstream 100 bases:

>100_bases
TGGGTATCGAGCCTCGATCATCTACCGCAGTTGGGTCTCGCATTGAGTCTTGCCCAGAAAGTGTGTAAAGTGGTAGACGA
TGTGGACTTCGGCTGTATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 56; Mature: 56

Protein sequence:

>56_residues
MLNSVDWDPSGAVSSAVERLPYKQDVTGSSPVPPIPIQAGSLGDTPASQGRIPEVE

Sequences:

>Translated_56_residues
MLNSVDWDPSGAVSSAVERLPYKQDVTGSSPVPPIPIQAGSLGDTPASQGRIPEVE
>Mature_56_residues
MLNSVDWDPSGAVSSAVERLPYKQDVTGSSPVPPIPIQAGSLGDTPASQGRIPEVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5804; Mature: 5804

Theoretical pI: Translated: 3.94; Mature: 3.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNSVDWDPSGAVSSAVERLPYKQDVTGSSPVPPIPIQAGSLGDTPASQGRIPEVE
CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLNSVDWDPSGAVSSAVERLPYKQDVTGSSPVPPIPIQAGSLGDTPASQGRIPEVE
CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA