Click here to switch to the map view.

The map label for this gene is 86609076

Identifier: 86609076

GI number: 86609076

Start: 1686156

End: 1687736

Strand: Reverse

Name: 86609076

Synonym: CYB_1613

Alternate gene names: NA

Gene position: 1687736-1686156 (Counterclockwise)

Preceding gene: 86609077

Following gene: 86609072

Centisome position: 55.4

GC content: 56.42

Gene sequence:

>1581_bases
ATGCCCGTGAAACACGCGAACTACTGGAAAACGCTGCTGGCCGGCACCCTGGGCGCAGCAGCGATCCTGACCCCTGGAGT
GGCTTATGCCCAAGCTACCGGGCCGGTCACCTCCATCTCTGAGCTTTCGGATGTGCAGCCCACCGACTGGGCCTTCCAAG
CCCTGCAATCCTTGGTGGAGCGCTACGGTTGTATTGCCGGCTACCCCGACCGCACCTTCCGCGGTAACCGGGCTATGACT
CGCTTTGAGTTTGCCGCTGGTATGAACGCCTGCCTGGATCGCATCAATGAGTTGATTGCAGCCGGTTTGGCCGACAAAGT
CTCCAAGGAAGACTTGGCCACTCTGCAGCGCTTGCAAGAGGAATTTGCTGCTGAGCTGGCAGCCCTGCGCGGGCGGGTGG
ATGCCCTGGAAGCCGATGTTACTGATTTGAAAGGGAAGGTCTTCAACCCGGTTACCAAGTTGAATGCCCAAGTCATCGCC
GCTGTTGTAGGCAGCGCTCTCACGGAAGACAGAGTTGTTGATGGGAGGGTAGTAGCAGAGCAAAACCAAGCCAACATGAC
TCTTCCCTATCGGGTACGCTTGAACTTCGATGCTTCTTTTGTGGGTCGCGATCGCCTGCGCATTCGTCTCCAAGCTCGCG
ATGCTGTGACTGAGTTCTTTGATGGGGATCCCGGCCTTGAGTTTGGCGGCCGTGGCGGCGGCACTTTCACCCTGGCCAAG
CTGATCTACCAATTCCCAGCTTTCAACCGAGCAGCTACCATCTACACGGGTATCGTTGGCTCAGGTGTGTTCGATGTATT
CAACTACAGCACACCCTTCGAAGCTCTCTCCGACTTTGCTGATGCTCCCAACTCCACGGCGGATGTGCCAGGTGGAGCTC
TGTTTGGCTTCCGCTACCGCCTCTCCGATCAACTGCGCTTGGCCTACAGCTACAGCACCAGGAACGCTCAAGCTTTGGGC
AAGGGCTTCGGCGACAGCGGTATAACCGGTAGCGATAGCGCCCACGCGGTGGAGCTGGGCTTCCTGCCGAATGAAAATCT
AGAGATTTACCTGCAGTTTGCCAGTACCTATCTGCAGACGGCAAACGATGGCCCTGAGTTCTTGGCCAACGGTACAGCTC
TTTTCCGTGGCCCTCTGAGAGTAACCAATGTGTCCACCTCTGCACGGGTGAACGCCTTTTCTGTGGCTGCCAACTGGGAG
ATTACCCCCCGCGTCATCGTATCTGGCTGGTTTACTGCTGGCAATGTGGATTACAACTTGCCCAATGTGGTACCGGCTGG
CACCATCGATCCGGGTGATGAAGATTTTAACGGATTCCTGTTTGGCTTCGCCTTCCCAGATCTGTTCATTGAGGGTGCTC
AAGGGGGTGTGGTTTTTGGCCAGCCAATTGTGACCACCAAAAACGAAGGAGTTTGGGATACCCGCCCGTTCATTGTGGAT
GTTTACTACAGCTTCCCGGTGAACGAGTACCTCACCCTTACCCCGGCGGCCTACTTTGTGAGCAACCCCAATGGTGCTCT
ACCTGGGGACAACGACCCAACCATTGGTGTAGGTGCTCTGCGGGCTGTGTTCAACTTCTGA

Upstream 100 bases:

>100_bases
TCCGCAGTTGCCAGACTTGTTCTTGAGTTAGGCAATTGGTTACCTCTAGAAGACATCCCTACAGCCAAAAAGGTGTGAGG
AAAAGAACAAGGAGAGAAAC

Downstream 100 bases:

>100_bases
TGAGTTGACCTCTTTTGCAGGTTCATAGCTGGTTAGGGGATCCACTGCAGTGGATCCCTTTTTTGGTTCAAACCTTCCTT
TATGGTCATTTCGATTCAGA

Product: S-layer protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 526; Mature: 525

Protein sequence:

>526_residues
MPVKHANYWKTLLAGTLGAAAILTPGVAYAQATGPVTSISELSDVQPTDWAFQALQSLVERYGCIAGYPDRTFRGNRAMT
RFEFAAGMNACLDRINELIAAGLADKVSKEDLATLQRLQEEFAAELAALRGRVDALEADVTDLKGKVFNPVTKLNAQVIA
AVVGSALTEDRVVDGRVVAEQNQANMTLPYRVRLNFDASFVGRDRLRIRLQARDAVTEFFDGDPGLEFGGRGGGTFTLAK
LIYQFPAFNRAATIYTGIVGSGVFDVFNYSTPFEALSDFADAPNSTADVPGGALFGFRYRLSDQLRLAYSYSTRNAQALG
KGFGDSGITGSDSAHAVELGFLPNENLEIYLQFASTYLQTANDGPEFLANGTALFRGPLRVTNVSTSARVNAFSVAANWE
ITPRVIVSGWFTAGNVDYNLPNVVPAGTIDPGDEDFNGFLFGFAFPDLFIEGAQGGVVFGQPIVTTKNEGVWDTRPFIVD
VYYSFPVNEYLTLTPAAYFVSNPNGALPGDNDPTIGVGALRAVFNF

Sequences:

>Translated_526_residues
MPVKHANYWKTLLAGTLGAAAILTPGVAYAQATGPVTSISELSDVQPTDWAFQALQSLVERYGCIAGYPDRTFRGNRAMT
RFEFAAGMNACLDRINELIAAGLADKVSKEDLATLQRLQEEFAAELAALRGRVDALEADVTDLKGKVFNPVTKLNAQVIA
AVVGSALTEDRVVDGRVVAEQNQANMTLPYRVRLNFDASFVGRDRLRIRLQARDAVTEFFDGDPGLEFGGRGGGTFTLAK
LIYQFPAFNRAATIYTGIVGSGVFDVFNYSTPFEALSDFADAPNSTADVPGGALFGFRYRLSDQLRLAYSYSTRNAQALG
KGFGDSGITGSDSAHAVELGFLPNENLEIYLQFASTYLQTANDGPEFLANGTALFRGPLRVTNVSTSARVNAFSVAANWE
ITPRVIVSGWFTAGNVDYNLPNVVPAGTIDPGDEDFNGFLFGFAFPDLFIEGAQGGVVFGQPIVTTKNEGVWDTRPFIVD
VYYSFPVNEYLTLTPAAYFVSNPNGALPGDNDPTIGVGALRAVFNF
>Mature_525_residues
PVKHANYWKTLLAGTLGAAAILTPGVAYAQATGPVTSISELSDVQPTDWAFQALQSLVERYGCIAGYPDRTFRGNRAMTR
FEFAAGMNACLDRINELIAAGLADKVSKEDLATLQRLQEEFAAELAALRGRVDALEADVTDLKGKVFNPVTKLNAQVIAA
VVGSALTEDRVVDGRVVAEQNQANMTLPYRVRLNFDASFVGRDRLRIRLQARDAVTEFFDGDPGLEFGGRGGGTFTLAKL
IYQFPAFNRAATIYTGIVGSGVFDVFNYSTPFEALSDFADAPNSTADVPGGALFGFRYRLSDQLRLAYSYSTRNAQALGK
GFGDSGITGSDSAHAVELGFLPNENLEIYLQFASTYLQTANDGPEFLANGTALFRGPLRVTNVSTSARVNAFSVAANWEI
TPRVIVSGWFTAGNVDYNLPNVVPAGTIDPGDEDFNGFLFGFAFPDLFIEGAQGGVVFGQPIVTTKNEGVWDTRPFIVDV
YYSFPVNEYLTLTPAAYFVSNPNGALPGDNDPTIGVGALRAVFNF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SLH (S-layer homology) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007049
- InterPro:   IPR001119 [H]

Pfam domain/function: PF04966 OprB; PF00395 SLH [H]

EC number: NA

Molecular weight: Translated: 56680; Mature: 56549

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: PS01072 SLH_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVKHANYWKTLLAGTLGAAAILTPGVAYAQATGPVTSISELSDVQPTDWAFQALQSLVE
CCCCCCHHHHHHHHHHHCHHHHHCCCCCEEECCCCCCCHHHHCCCCCCHHHHHHHHHHHH
RYGCIAGYPDRTFRGNRAMTRFEFAAGMNACLDRINELIAAGLADKVSKEDLATLQRLQE
HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
EFAAELAALRGRVDALEADVTDLKGKVFNPVTKLNAQVIAAVVGSALTEDRVVDGRVVAE
HHHHHHHHHHCCHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
QNQANMTLPYRVRLNFDASFVGRDRLRIRLQARDAVTEFFDGDPGLEFGGRGGGTFTLAK
CCCCCEEEEEEEEEECCCCEECCCEEEEEEEHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
LIYQFPAFNRAATIYTGIVGSGVFDVFNYSTPFEALSDFADAPNSTADVPGGALFGFRYR
HHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEEEE
LSDQLRLAYSYSTRNAQALGKGFGDSGITGSDSAHAVELGFLPNENLEIYLQFASTYLQT
CCCCEEEEEEECCCCHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEHHHHHHC
ANDGPEFLANGTALFRGPLRVTNVSTSARVNAFSVAANWEITPRVIVSGWFTAGNVDYNL
CCCCHHHHHCCCEEEECCEEEEECCCCCEEEEEEEEECCCCCCEEEEEEEEEECCCCCCC
PNVVPAGTIDPGDEDFNGFLFGFAFPDLFIEGAQGGVVFGQPIVTTKNEGVWDTRPFIVD
CCCCCCCCCCCCCCCCCCEEEEEECCHHEEECCCCCEEECCCEEEECCCCCCCCCCEEEE
VYYSFPVNEYLTLTPAAYFVSNPNGALPGDNDPTIGVGALRAVFNF
EEEECCCCCEEEECCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
PVKHANYWKTLLAGTLGAAAILTPGVAYAQATGPVTSISELSDVQPTDWAFQALQSLVE
CCCCCHHHHHHHHHHHCHHHHHCCCCCEEECCCCCCCHHHHCCCCCCHHHHHHHHHHHH
RYGCIAGYPDRTFRGNRAMTRFEFAAGMNACLDRINELIAAGLADKVSKEDLATLQRLQE
HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
EFAAELAALRGRVDALEADVTDLKGKVFNPVTKLNAQVIAAVVGSALTEDRVVDGRVVAE
HHHHHHHHHHCCHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
QNQANMTLPYRVRLNFDASFVGRDRLRIRLQARDAVTEFFDGDPGLEFGGRGGGTFTLAK
CCCCCEEEEEEEEEECCCCEECCCEEEEEEEHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
LIYQFPAFNRAATIYTGIVGSGVFDVFNYSTPFEALSDFADAPNSTADVPGGALFGFRYR
HHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEEEE
LSDQLRLAYSYSTRNAQALGKGFGDSGITGSDSAHAVELGFLPNENLEIYLQFASTYLQT
CCCCEEEEEEECCCCHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEHHHHHHC
ANDGPEFLANGTALFRGPLRVTNVSTSARVNAFSVAANWEITPRVIVSGWFTAGNVDYNL
CCCCHHHHHCCCEEEECCEEEEECCCCCEEEEEEEEECCCCCCEEEEEEEEEECCCCCCC
PNVVPAGTIDPGDEDFNGFLFGFAFPDLFIEGAQGGVVFGQPIVTTKNEGVWDTRPFIVD
CCCCCCCCCCCCCCCCCCEEEEEECCHHEEECCCCCEEECCCEEEECCCCCCCCCCEEEE
VYYSFPVNEYLTLTPAAYFVSNPNGALPGDNDPTIGVGALRAVFNF
EEEECCCCCEEEECCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]