Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608903

Identifier: 86608903

GI number: 86608903

Start: 1504815

End: 1506077

Strand: Direct

Name: 86608903

Synonym: CYB_1436

Alternate gene names: NA

Gene position: 1504815-1506077 (Clockwise)

Preceding gene: 86608897

Following gene: 86608906

Centisome position: 49.39

GC content: 51.46

Gene sequence:

>1263_bases
ATGTCTCAGAAAAGCCCATCCTTCTTAGAGAAACTGACTGACCTAACCCGCCAAATTGTTGACCGTGCCCGAGGGATCCC
AGAAGCTTCTGAATCTCTCGAGAAGCCAGAAGCCTTTAAGTCTTTCTGGAATTCGGTGTCTCAGATACTACAGAAGGACC
TCCTAGAGGCGCAGACAGAGTTGGGCCACTGCAACATCCTGGTCATTGGCAAAAGCGGGGTGGGCAAGAGCACCTTGGTC
AATGCAGTGTTTAGAGATGAGCTGGCCCGTACCGGTGTTGGCAGCCCCGTCACCCGCCACATTCGTCAGTATTCCAAGCC
AGGTTGCCCAATCACCATCTACGATACACCTGGCATGGAACTAGACGGTGAACAGAATCAGCAAGTTCGCCTGGAGGTTT
CCCAGCTTATCGAGGAGCTGCGCTTTAAGGATCCTGAACATCACATCCATCTTGTTTGGTACTGCCTCCACCACGAACTG
AAGCGGTTGGAGGAAGTTGAACGCAAATGGCTAAAGGAGTTGGAACTCAAAGACGTTCCCGTCATCTTGGTCTTAACCCA
ATGCTTGGAATATCCCAATCCTGAAGAGAGCGAGTTTTTCCGGTATTTGCAGCATCAAAATTTGCCTGTCCGCTACATTG
TTCCCGTTTTGGCCCGCAACAAGGCGATTAACCGGCAAATTACCATTCCTGCCCACGGGCTGGAGCACCTAATTGGCTGC
ACGCTAGAGCTTTTGCCGGAAGTGGCTCGCCTTGCCTTTATCCGCCAGCAATTGCTGCGGGTGGATCTCAAAGCCGAGGC
TGCCTTTAAGTACGTATCAGGCTATGTGGCCAGTGCAGCGTTTATCGGGGCAGTGCCCCTTCCCTTTGCAGATGCCCCTC
TGTTGGTTACAGCCCAAGCAGGCATGATTGCCAATATCAGCTTTATTTTTGGCTTCGAGGCTTCCCCTTCTTTTTACTAC
TCTTTGATAGCCGCTTTGGCAGGCACTACAATTACAACAGCAATCGGGCGAACGATTGTGTCCAACTTGCTGAAGATGAT
TCCCGGCCCGGGGATTGTAGGCAGCGCTATCCAATCCACTACGGCAGCCACCCTCACTCTCTCTCTGGGCCTGGCCTATA
TCGAGCTGATGAAGGCCATCGCCCGCGCCAAAATCCAAGGGATCCAGCTATCTCCAGAAGAGATGAAAGATATCTTTACA
CGCGAGTACCAAAGTTATGTTGCCTCGGGATCCAAAACTCTGAAAGATGACTTTTCATCCTAG

Upstream 100 bases:

>100_bases
TTGGCTAGGTCAGTCTCCGGTATCGGAAGAAACTTGGCAGTAGGATCCGCCCTGAACTACCTTTGTGGGGCTATCGGCCT
TAGGGGAAGAAGCAAGAAGC

Downstream 100 bases:

>100_bases
CTTTTGCGTAGGTACTGAATCTAGGGCAGGGGAAGGTCGTGGGGTCTCAAACCCAAAGGTGCCATCGACCAGGTAGAGGG
GGCGGCCTTTCACTTCTTCA

Product: GTP-binding protein

Products: NA

Alternate protein names: Protein/Domain Associated With GTPase-Like Protein; GTPase; GTPase Family

Number of amino acids: Translated: 420; Mature: 419

Protein sequence:

>420_residues
MSQKSPSFLEKLTDLTRQIVDRARGIPEASESLEKPEAFKSFWNSVSQILQKDLLEAQTELGHCNILVIGKSGVGKSTLV
NAVFRDELARTGVGSPVTRHIRQYSKPGCPITIYDTPGMELDGEQNQQVRLEVSQLIEELRFKDPEHHIHLVWYCLHHEL
KRLEEVERKWLKELELKDVPVILVLTQCLEYPNPEESEFFRYLQHQNLPVRYIVPVLARNKAINRQITIPAHGLEHLIGC
TLELLPEVARLAFIRQQLLRVDLKAEAAFKYVSGYVASAAFIGAVPLPFADAPLLVTAQAGMIANISFIFGFEASPSFYY
SLIAALAGTTITTAIGRTIVSNLLKMIPGPGIVGSAIQSTTAATLTLSLGLAYIELMKAIARAKIQGIQLSPEEMKDIFT
REYQSYVASGSKTLKDDFSS

Sequences:

>Translated_420_residues
MSQKSPSFLEKLTDLTRQIVDRARGIPEASESLEKPEAFKSFWNSVSQILQKDLLEAQTELGHCNILVIGKSGVGKSTLV
NAVFRDELARTGVGSPVTRHIRQYSKPGCPITIYDTPGMELDGEQNQQVRLEVSQLIEELRFKDPEHHIHLVWYCLHHEL
KRLEEVERKWLKELELKDVPVILVLTQCLEYPNPEESEFFRYLQHQNLPVRYIVPVLARNKAINRQITIPAHGLEHLIGC
TLELLPEVARLAFIRQQLLRVDLKAEAAFKYVSGYVASAAFIGAVPLPFADAPLLVTAQAGMIANISFIFGFEASPSFYY
SLIAALAGTTITTAIGRTIVSNLLKMIPGPGIVGSAIQSTTAATLTLSLGLAYIELMKAIARAKIQGIQLSPEEMKDIFT
REYQSYVASGSKTLKDDFSS
>Mature_419_residues
SQKSPSFLEKLTDLTRQIVDRARGIPEASESLEKPEAFKSFWNSVSQILQKDLLEAQTELGHCNILVIGKSGVGKSTLVN
AVFRDELARTGVGSPVTRHIRQYSKPGCPITIYDTPGMELDGEQNQQVRLEVSQLIEELRFKDPEHHIHLVWYCLHHELK
RLEEVERKWLKELELKDVPVILVLTQCLEYPNPEESEFFRYLQHQNLPVRYIVPVLARNKAINRQITIPAHGLEHLIGCT
LELLPEVARLAFIRQQLLRVDLKAEAAFKYVSGYVASAAFIGAVPLPFADAPLLVTAQAGMIANISFIFGFEASPSFYYS
LIAALAGTTITTAIGRTIVSNLLKMIPGPGIVGSAIQSTTAATLTLSLGLAYIELMKAIARAKIQGIQLSPEEMKDIFTR
EYQSYVASGSKTLKDDFSS

Specific function: Unknown

COG id: COG3596

COG function: function code R; Predicted GTPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46748; Mature: 46616

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQKSPSFLEKLTDLTRQIVDRARGIPEASESLEKPEAFKSFWNSVSQILQKDLLEAQTE
CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LGHCNILVIGKSGVGKSTLVNAVFRDELARTGVGSPVTRHIRQYSKPGCPITIYDTPGME
CCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEECCCCCC
LDGEQNQQVRLEVSQLIEELRFKDPEHHIHLVWYCLHHELKRLEEVERKWLKELELKDVP
CCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VILVLTQCLEYPNPEESEFFRYLQHQNLPVRYIVPVLARNKAINRQITIPAHGLEHLIGC
HHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCHHCCCEEECCHHHHHHHHHH
TLELLPEVARLAFIRQQLLRVDLKAEAAFKYVSGYVASAAFIGAVPLPFADAPLLVTAQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECC
GMIANISFIFGFEASPSFYYSLIAALAGTTITTAIGRTIVSNLLKMIPGPGIVGSAIQST
CCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
TAATLTLSLGLAYIELMKAIARAKIQGIQLSPEEMKDIFTREYQSYVASGSKTLKDDFSS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCC
>Mature Secondary Structure 
SQKSPSFLEKLTDLTRQIVDRARGIPEASESLEKPEAFKSFWNSVSQILQKDLLEAQTE
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LGHCNILVIGKSGVGKSTLVNAVFRDELARTGVGSPVTRHIRQYSKPGCPITIYDTPGME
CCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEECCCCCC
LDGEQNQQVRLEVSQLIEELRFKDPEHHIHLVWYCLHHELKRLEEVERKWLKELELKDVP
CCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VILVLTQCLEYPNPEESEFFRYLQHQNLPVRYIVPVLARNKAINRQITIPAHGLEHLIGC
HHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCHHCCCEEECCHHHHHHHHHH
TLELLPEVARLAFIRQQLLRVDLKAEAAFKYVSGYVASAAFIGAVPLPFADAPLLVTAQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECC
GMIANISFIFGFEASPSFYYSLIAALAGTTITTAIGRTIVSNLLKMIPGPGIVGSAIQST
CCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
TAATLTLSLGLAYIELMKAIARAKIQGIQLSPEEMKDIFTREYQSYVASGSKTLKDDFSS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA