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The map label for this gene is 86608883

Identifier: 86608883

GI number: 86608883

Start: 1484099

End: 1484635

Strand: Direct

Name: 86608883

Synonym: CYB_1415

Alternate gene names: NA

Gene position: 1484099-1484635 (Clockwise)

Preceding gene: 86608881

Following gene: 86608886

Centisome position: 48.71

GC content: 57.36

Gene sequence:

>537_bases
ATGGGCAAGGTTTTGGTTTTGAATGCCTCCTACGAGCCGCTCAACATCACCAGTTGGCGCAGGGCAGTCGTTCTTTTGCT
TAAGGGCAAGGCCGAGCAAATCGAGCACAATGGCCGAGTGGTGTACGGCAACATTCCCTTGCCCACTGTCATTCGTCTGC
GCCACTATGTCCACGTTCCCCACAAGGAGATCCCACTTACGCGCCGCAACGTCCTCTACCGGGATGGGCATCGTTGTCAG
TACTGCGGCTGCTTCGGCGAAGATCTCACCCTGGATCACGTGATCCCTCGGTCTCGTGGCGGCGGGGATACATGGGAAAA
TGTGGTCAGTGCCTGTGTGCGTTGCAACGTGAAAAAAGGGAACCGCACCCCCCGCGAAGCCGGTATGCCCCTGCTGCGCC
AACCCCGCCGTCCCCACAGCACTCTTTACTTTGAAATCTCCAAAGCCGTCGGCAGTGGTTCCCATCGAGAATGGTCTAAG
TACACCATCGGCCTAGAAGGGGATCCCCAGGAGGAATTGTTGGATAGCCCAAGCTAG

Upstream 100 bases:

>100_bases
CTACTGCTTGAATCTAAAGCTGTGTTAACATTTTGCATAACTTCAGGGGGCTGGCGCCTTCCGGCTTAGGTTGGGGATCC
CGTCAGCGGTGCGCGGCACT

Downstream 100 bases:

>100_bases
ACGGGCCGCCTAGGGATGGACTTCCGATACAGGGGCAGCTTTGGAAATGGGGGGAGAAGTGGTGGCTGGGATCCCGGTCT
CGATCCACCGGTGAATCAGG

Product: HNH endonuclease domain-containing protein

Products: NA

Alternate protein names: HNH Endonuclease Family Protein; Endonuclease; Restriction Endonuclease; HNH Endonuclease Domain Protein; HNH Endonuclease Domain-Containing Protein; Hnh Endonuclease; HNH Nuclease; McrA/HNH Family Nuclease; 5-Methylcytosine-Specific Restriction A; 5-Methylcytosine-Specific Restriction Protein; Restriction Endonuclease McrA/HNH Family; HNH EndonucleaseHNH Nuclease; HNH Family Endonuclease; LOW QUALITY PROTEIN Endonuclease; Hnh Endonuclease Domain Protein; 5-Methylcytosine-Specific Restriction Protein A

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MGKVLVLNASYEPLNITSWRRAVVLLLKGKAEQIEHNGRVVYGNIPLPTVIRLRHYVHVPHKEIPLTRRNVLYRDGHRCQ
YCGCFGEDLTLDHVIPRSRGGGDTWENVVSACVRCNVKKGNRTPREAGMPLLRQPRRPHSTLYFEISKAVGSGSHREWSK
YTIGLEGDPQEELLDSPS

Sequences:

>Translated_178_residues
MGKVLVLNASYEPLNITSWRRAVVLLLKGKAEQIEHNGRVVYGNIPLPTVIRLRHYVHVPHKEIPLTRRNVLYRDGHRCQ
YCGCFGEDLTLDHVIPRSRGGGDTWENVVSACVRCNVKKGNRTPREAGMPLLRQPRRPHSTLYFEISKAVGSGSHREWSK
YTIGLEGDPQEELLDSPS
>Mature_177_residues
GKVLVLNASYEPLNITSWRRAVVLLLKGKAEQIEHNGRVVYGNIPLPTVIRLRHYVHVPHKEIPLTRRNVLYRDGHRCQY
CGCFGEDLTLDHVIPRSRGGGDTWENVVSACVRCNVKKGNRTPREAGMPLLRQPRRPHSTLYFEISKAVGSGSHREWSKY
TIGLEGDPQEELLDSPS

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20190; Mature: 20059

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKVLVLNASYEPLNITSWRRAVVLLLKGKAEQIEHNGRVVYGNIPLPTVIRLRHYVHVP
CCCEEEEECCCCCCCCHHHHEEEEEEECCCHHHHCCCCEEEECCCCCHHHHHHHHHHCCC
HKEIPLTRRNVLYRDGHRCQYCGCFGEDLTLDHVIPRSRGGGDTWENVVSACVRCNVKKG
CCCCCCCHHCEEEECCCEEEEEECCCCCCEEHHCCCCCCCCCCHHHHHHHHHHCCCCCCC
NRTPREAGMPLLRQPRRPHSTLYFEISKAVGSGSHREWSKYTIGLEGDPQEELLDSPS
CCCCHHHCCCHHHCCCCCCCEEEEEEECHHCCCCCCCCCEEEEECCCCCHHHHCCCCC
>Mature Secondary Structure 
GKVLVLNASYEPLNITSWRRAVVLLLKGKAEQIEHNGRVVYGNIPLPTVIRLRHYVHVP
CCEEEEECCCCCCCCHHHHEEEEEEECCCHHHHCCCCEEEECCCCCHHHHHHHHHHCCC
HKEIPLTRRNVLYRDGHRCQYCGCFGEDLTLDHVIPRSRGGGDTWENVVSACVRCNVKKG
CCCCCCCHHCEEEECCCEEEEEECCCCCCEEHHCCCCCCCCCCHHHHHHHHHHCCCCCCC
NRTPREAGMPLLRQPRRPHSTLYFEISKAVGSGSHREWSKYTIGLEGDPQEELLDSPS
CCCCHHHCCCHHHCCCCCCCEEEEEEECHHCCCCCCCCCEEEEECCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA