Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
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Accession | NC_007776 |
Length | 3,046,682 |
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The map label for this gene is 86608881
Identifier: 86608881
GI number: 86608881
Start: 1479696
End: 1481996
Strand: Direct
Name: 86608881
Synonym: CYB_1412
Alternate gene names: NA
Gene position: 1479696-1481996 (Clockwise)
Preceding gene: 86608879
Following gene: 86608883
Centisome position: 48.57
GC content: 52.93
Gene sequence:
>2301_bases ATGTATCGCTTCCAGGTTCGTGCCATCACCCAGCCGGGCGAGAGAATTGCCTTGGTGGGATCCAGCGCAAAATTGGGCTC CTGGGATCCCTGCCATTGCATTTGGCTGCAGACGGATCCCGCTCATTATCCGCTGTGGTGGGTAGAGTTGCCGTTGAGCC CAGCAGACGGCACGCCCGGCCCGTTGTTGCCCTATAGCGGGTGTTCAAAAGAAATCCCTCGAGTAGAGTACCGGTATCTG CGCGTGCAAGCCGGTGGCGAAGTGATTTGGGAATCCACCGCTGTCAATCGCTGGGTGCCACTTGAGCCAGAACCTTTACC GGCAGTTTTGATTGTCGAGGATGGGGAGTTTGGCCAGATCCCTGCCTATCCTTACGGCTATTTTGCCGATCCCATTCCTG AGGTCGAACCGGAAAATCCGCAAGGGCTAAAAGTCGTCATTTTGGGCAGCTCCGTTGCCCTGGGGTGCAGCGCCTGGCTG TTGCGAGGTTGGGCTTGGCTGTTGCAGAAAGCTCTACAAGAGCGCTATGGCCATCAAGTGCGAAATCTCTCCCAATTGGG GGCCAATGTCAGCCGAACTCTGTTGCGGTTTGAGCAGGCGGTGATCCCTGAACATCCCGATGTCGTTATTGTTGCTTTGT CTTTGGGAAATGAAGGCTTGGCATCGGCCTTGCCCCAGCATCGCCGCGCCCTGCAGAGACGGTTTGAAAACGGCCTGCAG CGGCTAATTCAGCGAATTCAAGACATTGGAGCCTTGCCAGTTCTGGGAGGGGTTTATCCCCATGCAAACTACGGCCCAGA ACAGCATCTTCTTTTGCAAGAAACTCAGCAAAGAATGCTCAGCTGGGGATGCCCTGTGTTCAATTGGCTGCCTCATTTGG AAGATGGACAGAGCCGCTGGAAACCAGACCTTGCTTTTGACCCAGCTCACCCCAATTCCAAGGGTCATCAGGTCATGTTT GAGGCCATCGATCTCTCTCTTTTGGATCCCGGCCAAGTTAGTTCAGCTCGTAGAAAGCTTGCTCAACCCGTTGGAGAACG GGTCGTTTTTGCAGATGAGCATGGTTTTTGGGTGACTGCAGAAACAGGCAAAAACCAATTTCGCATCGTGAATATAACTC CCTACCCTTATACCATCACGCCCACTTGGCAACCTTTGCAAGCCGCTTTCCAAAAAGCAGGTCTACAGCCGGGTCTGTAT ATTGGCAAAAGCGATGAAAGGCTAGGGGATGCTACCTTATATTCCCTTTCCGTACAAGAAGATGGTTCGGTGCAAACCAC CCTCTCCATTCCTGCGGATGCCGATCTTGTCTTCTCCCCAGTAGCCCAGTTCTTTTCCTCGGAATCAGTAGAAACGATCT TCGAGGATGGATCGTTGATCCTTCTCAAGCTCAGTGGATCCTCAGAAGGCTCTTCTGATCCCATGCCTCGCCTGTGCGTG ATCAACCAGAGCAGTCACGAGTACAACATCCACCCCATGTGGAAGGAAGTGCGGGCCGCTCTCAAAGCCATGCCAGCGGG TGTTTATGAAGATCCGAGCCACCGCGAAGCTCTCTTCCGAACCCTGATGATCGGGGAAGGTGGCCTCGAAAGTCGGGTAA AGGCTGCTCCTGGATCGGTCATGCTGCTGGAATACACCTGCAAATTATCGGATATTCATCGCTTTGCCATTGTACCGTTA GGGGATCGCTGCGCGGTGCGAATGCTGCTCTACAAGTTGGAATATGACGGGCCTGCCTTTCCTTTTGATTTGACACGCAC CAGCAATTTGGCTGATGTGGCCGATATGATCCACAACGAGTTTCAGGGCATGTGGGATCCGCAATATTTGCACTACAGCC CTGAAGATCGGCGAATTTACCACAGCAAGTGGACGGGCCTCTCCTTTGGCCATGAGGTGGAAGAGGGGGAGGATCCACTT CAGAATATGCACCCCATCCATGAGCGAATGCGAACTCGCTACACTGCTCGCGCCAAGCGTTTTATGTATGTTTTGGAAAA AGCCGATAAAGTCTTGTTTGTGCGCACAGGGGGTTGCCGGCGAGAGGCCGTTGTTGACTTAATGGATAAGCTGGCGGCTA AGCGCAGGGGCAAGCCTTTTCTGCTGCTGATTGTTTCTCCTCAGTCTTCTGATGAGTTTGCCGGGATCCCCAATGTTATC CATTATGAGATGGAGTTAAATCCCGACCGCATGTGTGCAGATCCTGAGCATTGGAAGTACTGCACAGGGGTAATGAGAGA TATTCTCCATTCTTTGGGGGTCTCTACCCGAAATCTTTTCTGGTGCCCTCCACAACTGTAG
Upstream 100 bases:
>100_bases TTCTCAGCCGGCTGCTGAGCTGTTGATTGGGTGATGAGTGAGTGCAGTCCGCCCGCACAGCCCCACAATTTCCCATTGAA TCCTGTGCCAGGAAAACGTT
Downstream 100 bases:
>100_bases CCGTTCCAAGGTTTCACTGCAATTCGAAAGAATGATCGCTGCTGCCCAAACGCTCCGCGCCGCTTCCGCGACCACCCCCA ACTCTTCTCCCAAAGGGACT
Product: GDSL-like lipase/acylhydrolase domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 766; Mature: 766
Protein sequence:
>766_residues MYRFQVRAITQPGERIALVGSSAKLGSWDPCHCIWLQTDPAHYPLWWVELPLSPADGTPGPLLPYSGCSKEIPRVEYRYL RVQAGGEVIWESTAVNRWVPLEPEPLPAVLIVEDGEFGQIPAYPYGYFADPIPEVEPENPQGLKVVILGSSVALGCSAWL LRGWAWLLQKALQERYGHQVRNLSQLGANVSRTLLRFEQAVIPEHPDVVIVALSLGNEGLASALPQHRRALQRRFENGLQ RLIQRIQDIGALPVLGGVYPHANYGPEQHLLLQETQQRMLSWGCPVFNWLPHLEDGQSRWKPDLAFDPAHPNSKGHQVMF EAIDLSLLDPGQVSSARRKLAQPVGERVVFADEHGFWVTAETGKNQFRIVNITPYPYTITPTWQPLQAAFQKAGLQPGLY IGKSDERLGDATLYSLSVQEDGSVQTTLSIPADADLVFSPVAQFFSSESVETIFEDGSLILLKLSGSSEGSSDPMPRLCV INQSSHEYNIHPMWKEVRAALKAMPAGVYEDPSHREALFRTLMIGEGGLESRVKAAPGSVMLLEYTCKLSDIHRFAIVPL GDRCAVRMLLYKLEYDGPAFPFDLTRTSNLADVADMIHNEFQGMWDPQYLHYSPEDRRIYHSKWTGLSFGHEVEEGEDPL QNMHPIHERMRTRYTARAKRFMYVLEKADKVLFVRTGGCRREAVVDLMDKLAAKRRGKPFLLLIVSPQSSDEFAGIPNVI HYEMELNPDRMCADPEHWKYCTGVMRDILHSLGVSTRNLFWCPPQL
Sequences:
>Translated_766_residues MYRFQVRAITQPGERIALVGSSAKLGSWDPCHCIWLQTDPAHYPLWWVELPLSPADGTPGPLLPYSGCSKEIPRVEYRYL RVQAGGEVIWESTAVNRWVPLEPEPLPAVLIVEDGEFGQIPAYPYGYFADPIPEVEPENPQGLKVVILGSSVALGCSAWL LRGWAWLLQKALQERYGHQVRNLSQLGANVSRTLLRFEQAVIPEHPDVVIVALSLGNEGLASALPQHRRALQRRFENGLQ RLIQRIQDIGALPVLGGVYPHANYGPEQHLLLQETQQRMLSWGCPVFNWLPHLEDGQSRWKPDLAFDPAHPNSKGHQVMF EAIDLSLLDPGQVSSARRKLAQPVGERVVFADEHGFWVTAETGKNQFRIVNITPYPYTITPTWQPLQAAFQKAGLQPGLY IGKSDERLGDATLYSLSVQEDGSVQTTLSIPADADLVFSPVAQFFSSESVETIFEDGSLILLKLSGSSEGSSDPMPRLCV INQSSHEYNIHPMWKEVRAALKAMPAGVYEDPSHREALFRTLMIGEGGLESRVKAAPGSVMLLEYTCKLSDIHRFAIVPL GDRCAVRMLLYKLEYDGPAFPFDLTRTSNLADVADMIHNEFQGMWDPQYLHYSPEDRRIYHSKWTGLSFGHEVEEGEDPL QNMHPIHERMRTRYTARAKRFMYVLEKADKVLFVRTGGCRREAVVDLMDKLAAKRRGKPFLLLIVSPQSSDEFAGIPNVI HYEMELNPDRMCADPEHWKYCTGVMRDILHSLGVSTRNLFWCPPQL >Mature_766_residues MYRFQVRAITQPGERIALVGSSAKLGSWDPCHCIWLQTDPAHYPLWWVELPLSPADGTPGPLLPYSGCSKEIPRVEYRYL RVQAGGEVIWESTAVNRWVPLEPEPLPAVLIVEDGEFGQIPAYPYGYFADPIPEVEPENPQGLKVVILGSSVALGCSAWL LRGWAWLLQKALQERYGHQVRNLSQLGANVSRTLLRFEQAVIPEHPDVVIVALSLGNEGLASALPQHRRALQRRFENGLQ RLIQRIQDIGALPVLGGVYPHANYGPEQHLLLQETQQRMLSWGCPVFNWLPHLEDGQSRWKPDLAFDPAHPNSKGHQVMF EAIDLSLLDPGQVSSARRKLAQPVGERVVFADEHGFWVTAETGKNQFRIVNITPYPYTITPTWQPLQAAFQKAGLQPGLY IGKSDERLGDATLYSLSVQEDGSVQTTLSIPADADLVFSPVAQFFSSESVETIFEDGSLILLKLSGSSEGSSDPMPRLCV INQSSHEYNIHPMWKEVRAALKAMPAGVYEDPSHREALFRTLMIGEGGLESRVKAAPGSVMLLEYTCKLSDIHRFAIVPL GDRCAVRMLLYKLEYDGPAFPFDLTRTSNLADVADMIHNEFQGMWDPQYLHYSPEDRRIYHSKWTGLSFGHEVEEGEDPL QNMHPIHERMRTRYTARAKRFMYVLEKADKVLFVRTGGCRREAVVDLMDKLAAKRRGKPFLLLIVSPQSSDEFAGIPNVI HYEMELNPDRMCADPEHWKYCTGVMRDILHSLGVSTRNLFWCPPQL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86271; Mature: 86271
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: PS51166 CBM20
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRFQVRAITQPGERIALVGSSAKLGSWDPCHCIWLQTDPAHYPLWWVELPLSPADGTPG CCEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCC PLLPYSGCSKEIPRVEYRYLRVQAGGEVIWESTAVNRWVPLEPEPLPAVLIVEDGEFGQI CCCCCCCCCCCCCCCEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCC PAYPYGYFADPIPEVEPENPQGLKVVILGSSVALGCSAWLLRGWAWLLQKALQERYGHQV CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RNLSQLGANVSRTLLRFEQAVIPEHPDVVIVALSLGNEGLASALPQHRRALQRRFENGLQ HHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH RLIQRIQDIGALPVLGGVYPHANYGPEQHLLLQETQQRMLSWGCPVFNWLPHLEDGQSRW HHHHHHHHCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHC KPDLAFDPAHPNSKGHQVMFEAIDLSLLDPGQVSSARRKLAQPVGERVVFADEHGFWVTA CCCCCCCCCCCCCCCCEEEEEEECEEECCCCCHHHHHHHHHHHHCCEEEEEECCCEEEEE ETGKNQFRIVNITPYPYTITPTWQPLQAAFQKAGLQPGLYIGKSDERLGDATLYSLSVQE ECCCCEEEEEEECCCCEEECCCCHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEEEEECC DGSVQTTLSIPADADLVFSPVAQFFSSESVETIFEDGSLILLKLSGSSEGSSDPMPRLCV CCCEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHCCCCEEEEEECCCCCCCCCCCCEEEE INQSSHEYNIHPMWKEVRAALKAMPAGVYEDPSHREALFRTLMIGEGGLESRVKAAPGSV EECCCCCEECCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCE MLLEYTCKLSDIHRFAIVPLGDRCAVRMLLYKLEYDGPAFPFDLTRTSNLADVADMIHNE EEEEEEECCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHHHHHH FQGMWDPQYLHYSPEDRRIYHSKWTGLSFGHEVEEGEDPLQNMHPIHERMRTRYTARAKR HCCCCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH FMYVLEKADKVLFVRTGGCRREAVVDLMDKLAAKRRGKPFLLLIVSPQSSDEFAGIPNVI HHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEE HYEMELNPDRMCADPEHWKYCTGVMRDILHSLGVSTRNLFWCPPQL EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCC >Mature Secondary Structure MYRFQVRAITQPGERIALVGSSAKLGSWDPCHCIWLQTDPAHYPLWWVELPLSPADGTPG CCEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCC PLLPYSGCSKEIPRVEYRYLRVQAGGEVIWESTAVNRWVPLEPEPLPAVLIVEDGEFGQI CCCCCCCCCCCCCCCEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCC PAYPYGYFADPIPEVEPENPQGLKVVILGSSVALGCSAWLLRGWAWLLQKALQERYGHQV CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RNLSQLGANVSRTLLRFEQAVIPEHPDVVIVALSLGNEGLASALPQHRRALQRRFENGLQ HHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH RLIQRIQDIGALPVLGGVYPHANYGPEQHLLLQETQQRMLSWGCPVFNWLPHLEDGQSRW HHHHHHHHCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHC KPDLAFDPAHPNSKGHQVMFEAIDLSLLDPGQVSSARRKLAQPVGERVVFADEHGFWVTA CCCCCCCCCCCCCCCCEEEEEEECEEECCCCCHHHHHHHHHHHHCCEEEEEECCCEEEEE ETGKNQFRIVNITPYPYTITPTWQPLQAAFQKAGLQPGLYIGKSDERLGDATLYSLSVQE ECCCCEEEEEEECCCCEEECCCCHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEEEEECC DGSVQTTLSIPADADLVFSPVAQFFSSESVETIFEDGSLILLKLSGSSEGSSDPMPRLCV CCCEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHCCCCEEEEEECCCCCCCCCCCCEEEE INQSSHEYNIHPMWKEVRAALKAMPAGVYEDPSHREALFRTLMIGEGGLESRVKAAPGSV EECCCCCEECCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCE MLLEYTCKLSDIHRFAIVPLGDRCAVRMLLYKLEYDGPAFPFDLTRTSNLADVADMIHNE EEEEEEECCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHHHHHH FQGMWDPQYLHYSPEDRRIYHSKWTGLSFGHEVEEGEDPLQNMHPIHERMRTRYTARAKR HCCCCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH FMYVLEKADKVLFVRTGGCRREAVVDLMDKLAAKRRGKPFLLLIVSPQSSDEFAGIPNVI HHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEE HYEMELNPDRMCADPEHWKYCTGVMRDILHSLGVSTRNLFWCPPQL EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA