Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608881

Identifier: 86608881

GI number: 86608881

Start: 1479696

End: 1481996

Strand: Direct

Name: 86608881

Synonym: CYB_1412

Alternate gene names: NA

Gene position: 1479696-1481996 (Clockwise)

Preceding gene: 86608879

Following gene: 86608883

Centisome position: 48.57

GC content: 52.93

Gene sequence:

>2301_bases
ATGTATCGCTTCCAGGTTCGTGCCATCACCCAGCCGGGCGAGAGAATTGCCTTGGTGGGATCCAGCGCAAAATTGGGCTC
CTGGGATCCCTGCCATTGCATTTGGCTGCAGACGGATCCCGCTCATTATCCGCTGTGGTGGGTAGAGTTGCCGTTGAGCC
CAGCAGACGGCACGCCCGGCCCGTTGTTGCCCTATAGCGGGTGTTCAAAAGAAATCCCTCGAGTAGAGTACCGGTATCTG
CGCGTGCAAGCCGGTGGCGAAGTGATTTGGGAATCCACCGCTGTCAATCGCTGGGTGCCACTTGAGCCAGAACCTTTACC
GGCAGTTTTGATTGTCGAGGATGGGGAGTTTGGCCAGATCCCTGCCTATCCTTACGGCTATTTTGCCGATCCCATTCCTG
AGGTCGAACCGGAAAATCCGCAAGGGCTAAAAGTCGTCATTTTGGGCAGCTCCGTTGCCCTGGGGTGCAGCGCCTGGCTG
TTGCGAGGTTGGGCTTGGCTGTTGCAGAAAGCTCTACAAGAGCGCTATGGCCATCAAGTGCGAAATCTCTCCCAATTGGG
GGCCAATGTCAGCCGAACTCTGTTGCGGTTTGAGCAGGCGGTGATCCCTGAACATCCCGATGTCGTTATTGTTGCTTTGT
CTTTGGGAAATGAAGGCTTGGCATCGGCCTTGCCCCAGCATCGCCGCGCCCTGCAGAGACGGTTTGAAAACGGCCTGCAG
CGGCTAATTCAGCGAATTCAAGACATTGGAGCCTTGCCAGTTCTGGGAGGGGTTTATCCCCATGCAAACTACGGCCCAGA
ACAGCATCTTCTTTTGCAAGAAACTCAGCAAAGAATGCTCAGCTGGGGATGCCCTGTGTTCAATTGGCTGCCTCATTTGG
AAGATGGACAGAGCCGCTGGAAACCAGACCTTGCTTTTGACCCAGCTCACCCCAATTCCAAGGGTCATCAGGTCATGTTT
GAGGCCATCGATCTCTCTCTTTTGGATCCCGGCCAAGTTAGTTCAGCTCGTAGAAAGCTTGCTCAACCCGTTGGAGAACG
GGTCGTTTTTGCAGATGAGCATGGTTTTTGGGTGACTGCAGAAACAGGCAAAAACCAATTTCGCATCGTGAATATAACTC
CCTACCCTTATACCATCACGCCCACTTGGCAACCTTTGCAAGCCGCTTTCCAAAAAGCAGGTCTACAGCCGGGTCTGTAT
ATTGGCAAAAGCGATGAAAGGCTAGGGGATGCTACCTTATATTCCCTTTCCGTACAAGAAGATGGTTCGGTGCAAACCAC
CCTCTCCATTCCTGCGGATGCCGATCTTGTCTTCTCCCCAGTAGCCCAGTTCTTTTCCTCGGAATCAGTAGAAACGATCT
TCGAGGATGGATCGTTGATCCTTCTCAAGCTCAGTGGATCCTCAGAAGGCTCTTCTGATCCCATGCCTCGCCTGTGCGTG
ATCAACCAGAGCAGTCACGAGTACAACATCCACCCCATGTGGAAGGAAGTGCGGGCCGCTCTCAAAGCCATGCCAGCGGG
TGTTTATGAAGATCCGAGCCACCGCGAAGCTCTCTTCCGAACCCTGATGATCGGGGAAGGTGGCCTCGAAAGTCGGGTAA
AGGCTGCTCCTGGATCGGTCATGCTGCTGGAATACACCTGCAAATTATCGGATATTCATCGCTTTGCCATTGTACCGTTA
GGGGATCGCTGCGCGGTGCGAATGCTGCTCTACAAGTTGGAATATGACGGGCCTGCCTTTCCTTTTGATTTGACACGCAC
CAGCAATTTGGCTGATGTGGCCGATATGATCCACAACGAGTTTCAGGGCATGTGGGATCCGCAATATTTGCACTACAGCC
CTGAAGATCGGCGAATTTACCACAGCAAGTGGACGGGCCTCTCCTTTGGCCATGAGGTGGAAGAGGGGGAGGATCCACTT
CAGAATATGCACCCCATCCATGAGCGAATGCGAACTCGCTACACTGCTCGCGCCAAGCGTTTTATGTATGTTTTGGAAAA
AGCCGATAAAGTCTTGTTTGTGCGCACAGGGGGTTGCCGGCGAGAGGCCGTTGTTGACTTAATGGATAAGCTGGCGGCTA
AGCGCAGGGGCAAGCCTTTTCTGCTGCTGATTGTTTCTCCTCAGTCTTCTGATGAGTTTGCCGGGATCCCCAATGTTATC
CATTATGAGATGGAGTTAAATCCCGACCGCATGTGTGCAGATCCTGAGCATTGGAAGTACTGCACAGGGGTAATGAGAGA
TATTCTCCATTCTTTGGGGGTCTCTACCCGAAATCTTTTCTGGTGCCCTCCACAACTGTAG

Upstream 100 bases:

>100_bases
TTCTCAGCCGGCTGCTGAGCTGTTGATTGGGTGATGAGTGAGTGCAGTCCGCCCGCACAGCCCCACAATTTCCCATTGAA
TCCTGTGCCAGGAAAACGTT

Downstream 100 bases:

>100_bases
CCGTTCCAAGGTTTCACTGCAATTCGAAAGAATGATCGCTGCTGCCCAAACGCTCCGCGCCGCTTCCGCGACCACCCCCA
ACTCTTCTCCCAAAGGGACT

Product: GDSL-like lipase/acylhydrolase domain-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 766; Mature: 766

Protein sequence:

>766_residues
MYRFQVRAITQPGERIALVGSSAKLGSWDPCHCIWLQTDPAHYPLWWVELPLSPADGTPGPLLPYSGCSKEIPRVEYRYL
RVQAGGEVIWESTAVNRWVPLEPEPLPAVLIVEDGEFGQIPAYPYGYFADPIPEVEPENPQGLKVVILGSSVALGCSAWL
LRGWAWLLQKALQERYGHQVRNLSQLGANVSRTLLRFEQAVIPEHPDVVIVALSLGNEGLASALPQHRRALQRRFENGLQ
RLIQRIQDIGALPVLGGVYPHANYGPEQHLLLQETQQRMLSWGCPVFNWLPHLEDGQSRWKPDLAFDPAHPNSKGHQVMF
EAIDLSLLDPGQVSSARRKLAQPVGERVVFADEHGFWVTAETGKNQFRIVNITPYPYTITPTWQPLQAAFQKAGLQPGLY
IGKSDERLGDATLYSLSVQEDGSVQTTLSIPADADLVFSPVAQFFSSESVETIFEDGSLILLKLSGSSEGSSDPMPRLCV
INQSSHEYNIHPMWKEVRAALKAMPAGVYEDPSHREALFRTLMIGEGGLESRVKAAPGSVMLLEYTCKLSDIHRFAIVPL
GDRCAVRMLLYKLEYDGPAFPFDLTRTSNLADVADMIHNEFQGMWDPQYLHYSPEDRRIYHSKWTGLSFGHEVEEGEDPL
QNMHPIHERMRTRYTARAKRFMYVLEKADKVLFVRTGGCRREAVVDLMDKLAAKRRGKPFLLLIVSPQSSDEFAGIPNVI
HYEMELNPDRMCADPEHWKYCTGVMRDILHSLGVSTRNLFWCPPQL

Sequences:

>Translated_766_residues
MYRFQVRAITQPGERIALVGSSAKLGSWDPCHCIWLQTDPAHYPLWWVELPLSPADGTPGPLLPYSGCSKEIPRVEYRYL
RVQAGGEVIWESTAVNRWVPLEPEPLPAVLIVEDGEFGQIPAYPYGYFADPIPEVEPENPQGLKVVILGSSVALGCSAWL
LRGWAWLLQKALQERYGHQVRNLSQLGANVSRTLLRFEQAVIPEHPDVVIVALSLGNEGLASALPQHRRALQRRFENGLQ
RLIQRIQDIGALPVLGGVYPHANYGPEQHLLLQETQQRMLSWGCPVFNWLPHLEDGQSRWKPDLAFDPAHPNSKGHQVMF
EAIDLSLLDPGQVSSARRKLAQPVGERVVFADEHGFWVTAETGKNQFRIVNITPYPYTITPTWQPLQAAFQKAGLQPGLY
IGKSDERLGDATLYSLSVQEDGSVQTTLSIPADADLVFSPVAQFFSSESVETIFEDGSLILLKLSGSSEGSSDPMPRLCV
INQSSHEYNIHPMWKEVRAALKAMPAGVYEDPSHREALFRTLMIGEGGLESRVKAAPGSVMLLEYTCKLSDIHRFAIVPL
GDRCAVRMLLYKLEYDGPAFPFDLTRTSNLADVADMIHNEFQGMWDPQYLHYSPEDRRIYHSKWTGLSFGHEVEEGEDPL
QNMHPIHERMRTRYTARAKRFMYVLEKADKVLFVRTGGCRREAVVDLMDKLAAKRRGKPFLLLIVSPQSSDEFAGIPNVI
HYEMELNPDRMCADPEHWKYCTGVMRDILHSLGVSTRNLFWCPPQL
>Mature_766_residues
MYRFQVRAITQPGERIALVGSSAKLGSWDPCHCIWLQTDPAHYPLWWVELPLSPADGTPGPLLPYSGCSKEIPRVEYRYL
RVQAGGEVIWESTAVNRWVPLEPEPLPAVLIVEDGEFGQIPAYPYGYFADPIPEVEPENPQGLKVVILGSSVALGCSAWL
LRGWAWLLQKALQERYGHQVRNLSQLGANVSRTLLRFEQAVIPEHPDVVIVALSLGNEGLASALPQHRRALQRRFENGLQ
RLIQRIQDIGALPVLGGVYPHANYGPEQHLLLQETQQRMLSWGCPVFNWLPHLEDGQSRWKPDLAFDPAHPNSKGHQVMF
EAIDLSLLDPGQVSSARRKLAQPVGERVVFADEHGFWVTAETGKNQFRIVNITPYPYTITPTWQPLQAAFQKAGLQPGLY
IGKSDERLGDATLYSLSVQEDGSVQTTLSIPADADLVFSPVAQFFSSESVETIFEDGSLILLKLSGSSEGSSDPMPRLCV
INQSSHEYNIHPMWKEVRAALKAMPAGVYEDPSHREALFRTLMIGEGGLESRVKAAPGSVMLLEYTCKLSDIHRFAIVPL
GDRCAVRMLLYKLEYDGPAFPFDLTRTSNLADVADMIHNEFQGMWDPQYLHYSPEDRRIYHSKWTGLSFGHEVEEGEDPL
QNMHPIHERMRTRYTARAKRFMYVLEKADKVLFVRTGGCRREAVVDLMDKLAAKRRGKPFLLLIVSPQSSDEFAGIPNVI
HYEMELNPDRMCADPEHWKYCTGVMRDILHSLGVSTRNLFWCPPQL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 86271; Mature: 86271

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: PS51166 CBM20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRFQVRAITQPGERIALVGSSAKLGSWDPCHCIWLQTDPAHYPLWWVELPLSPADGTPG
CCEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCC
PLLPYSGCSKEIPRVEYRYLRVQAGGEVIWESTAVNRWVPLEPEPLPAVLIVEDGEFGQI
CCCCCCCCCCCCCCCEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCC
PAYPYGYFADPIPEVEPENPQGLKVVILGSSVALGCSAWLLRGWAWLLQKALQERYGHQV
CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNLSQLGANVSRTLLRFEQAVIPEHPDVVIVALSLGNEGLASALPQHRRALQRRFENGLQ
HHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
RLIQRIQDIGALPVLGGVYPHANYGPEQHLLLQETQQRMLSWGCPVFNWLPHLEDGQSRW
HHHHHHHHCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHC
KPDLAFDPAHPNSKGHQVMFEAIDLSLLDPGQVSSARRKLAQPVGERVVFADEHGFWVTA
CCCCCCCCCCCCCCCCEEEEEEECEEECCCCCHHHHHHHHHHHHCCEEEEEECCCEEEEE
ETGKNQFRIVNITPYPYTITPTWQPLQAAFQKAGLQPGLYIGKSDERLGDATLYSLSVQE
ECCCCEEEEEEECCCCEEECCCCHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEEEEECC
DGSVQTTLSIPADADLVFSPVAQFFSSESVETIFEDGSLILLKLSGSSEGSSDPMPRLCV
CCCEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHCCCCEEEEEECCCCCCCCCCCCEEEE
INQSSHEYNIHPMWKEVRAALKAMPAGVYEDPSHREALFRTLMIGEGGLESRVKAAPGSV
EECCCCCEECCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCE
MLLEYTCKLSDIHRFAIVPLGDRCAVRMLLYKLEYDGPAFPFDLTRTSNLADVADMIHNE
EEEEEEECCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHHHHHH
FQGMWDPQYLHYSPEDRRIYHSKWTGLSFGHEVEEGEDPLQNMHPIHERMRTRYTARAKR
HCCCCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
FMYVLEKADKVLFVRTGGCRREAVVDLMDKLAAKRRGKPFLLLIVSPQSSDEFAGIPNVI
HHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEE
HYEMELNPDRMCADPEHWKYCTGVMRDILHSLGVSTRNLFWCPPQL
EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCC
>Mature Secondary Structure
MYRFQVRAITQPGERIALVGSSAKLGSWDPCHCIWLQTDPAHYPLWWVELPLSPADGTPG
CCEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCC
PLLPYSGCSKEIPRVEYRYLRVQAGGEVIWESTAVNRWVPLEPEPLPAVLIVEDGEFGQI
CCCCCCCCCCCCCCCEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCC
PAYPYGYFADPIPEVEPENPQGLKVVILGSSVALGCSAWLLRGWAWLLQKALQERYGHQV
CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNLSQLGANVSRTLLRFEQAVIPEHPDVVIVALSLGNEGLASALPQHRRALQRRFENGLQ
HHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
RLIQRIQDIGALPVLGGVYPHANYGPEQHLLLQETQQRMLSWGCPVFNWLPHLEDGQSRW
HHHHHHHHCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHC
KPDLAFDPAHPNSKGHQVMFEAIDLSLLDPGQVSSARRKLAQPVGERVVFADEHGFWVTA
CCCCCCCCCCCCCCCCEEEEEEECEEECCCCCHHHHHHHHHHHHCCEEEEEECCCEEEEE
ETGKNQFRIVNITPYPYTITPTWQPLQAAFQKAGLQPGLYIGKSDERLGDATLYSLSVQE
ECCCCEEEEEEECCCCEEECCCCHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEEEEECC
DGSVQTTLSIPADADLVFSPVAQFFSSESVETIFEDGSLILLKLSGSSEGSSDPMPRLCV
CCCEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHCCCCEEEEEECCCCCCCCCCCCEEEE
INQSSHEYNIHPMWKEVRAALKAMPAGVYEDPSHREALFRTLMIGEGGLESRVKAAPGSV
EECCCCCEECCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCE
MLLEYTCKLSDIHRFAIVPLGDRCAVRMLLYKLEYDGPAFPFDLTRTSNLADVADMIHNE
EEEEEEECCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHHHHHH
FQGMWDPQYLHYSPEDRRIYHSKWTGLSFGHEVEEGEDPLQNMHPIHERMRTRYTARAKR
HCCCCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
FMYVLEKADKVLFVRTGGCRREAVVDLMDKLAAKRRGKPFLLLIVSPQSSDEFAGIPNVI
HHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEE
HYEMELNPDRMCADPEHWKYCTGVMRDILHSLGVSTRNLFWCPPQL
EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA