Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608786

Identifier: 86608786

GI number: 86608786

Start: 1375774

End: 1376055

Strand: Direct

Name: 86608786

Synonym: CYB_1311

Alternate gene names: NA

Gene position: 1375774-1376055 (Clockwise)

Preceding gene: 86608785

Following gene: 86608793

Centisome position: 45.16

GC content: 53.55

Gene sequence:

>282_bases
ATGCAAACACTCGATGCAATCCCCGATAAAAAACGAGCAGAGCGAATAACCTGTAGCTACATCAATGCGACCAGCTCCAT
TCAGGTGGTTCGCATCACGAATATCGAAAACTGGTACTTTGAGCGGGTGGTCTTTCCAGGCCAGCGGCTGCTGTTTGAGG
CGGTGCCTGGAGCCAAACTGGAGATTCACACGGGTATGATGGCCAGCTCTATTCTGGCGGATACCATCCCCTGTGAAAAG
CTGCGCGTTCGAGAAACGGAGCCGGTGACCGTAGGCGCCTAA

Upstream 100 bases:

>100_bases
TCTGCCAGTTGGGATCGCCGTATCGCAGACTACCGCAGTGATCCCCAGGCGGTGTTAGGGTAGATGATAGGCTGAGCAAA
GTGGGCTGGTGATCTGAACA

Downstream 100 bases:

>100_bases
ATCCCCAGAGGCCAGCGGTGCGGACTAGGTTTCGCGGCCTTGTTGCCTTCTCTCCTCACTCTCTGGGCTGGGGGAAGGCT
GAGGCGAGGGGCTGGCGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MQTLDAIPDKKRAERITCSYINATSSIQVVRITNIENWYFERVVFPGQRLLFEAVPGAKLEIHTGMMASSILADTIPCEK
LRVRETEPVTVGA

Sequences:

>Translated_93_residues
MQTLDAIPDKKRAERITCSYINATSSIQVVRITNIENWYFERVVFPGQRLLFEAVPGAKLEIHTGMMASSILADTIPCEK
LRVRETEPVTVGA
>Mature_93_residues
MQTLDAIPDKKRAERITCSYINATSSIQVVRITNIENWYFERVVFPGQRLLFEAVPGAKLEIHTGMMASSILADTIPCEK
LRVRETEPVTVGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014964 [H]

Pfam domain/function: PF08865 DUF1830 [H]

EC number: NA

Molecular weight: Translated: 10437; Mature: 10437

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTLDAIPDKKRAERITCSYINATSSIQVVRITNIENWYFERVVFPGQRLLFEAVPGAKL
CCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCEEEEEEECCCCEEEEECCCCCEE
EIHTGMMASSILADTIPCEKLRVRETEPVTVGA
EEECCHHHHHHHHCCCCCCCEEECCCCCEEECC
>Mature Secondary Structure
MQTLDAIPDKKRAERITCSYINATSSIQVVRITNIENWYFERVVFPGQRLLFEAVPGAKL
CCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCEEEEEEECCCCEEEEECCCCCEE
EIHTGMMASSILADTIPCEKLRVRETEPVTVGA
EEECCHHHHHHHHCCCCCCCEEECCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]