Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
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Accession | NC_007776 |
Length | 3,046,682 |
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The map label for this gene is 86608786
Identifier: 86608786
GI number: 86608786
Start: 1375774
End: 1376055
Strand: Direct
Name: 86608786
Synonym: CYB_1311
Alternate gene names: NA
Gene position: 1375774-1376055 (Clockwise)
Preceding gene: 86608785
Following gene: 86608793
Centisome position: 45.16
GC content: 53.55
Gene sequence:
>282_bases ATGCAAACACTCGATGCAATCCCCGATAAAAAACGAGCAGAGCGAATAACCTGTAGCTACATCAATGCGACCAGCTCCAT TCAGGTGGTTCGCATCACGAATATCGAAAACTGGTACTTTGAGCGGGTGGTCTTTCCAGGCCAGCGGCTGCTGTTTGAGG CGGTGCCTGGAGCCAAACTGGAGATTCACACGGGTATGATGGCCAGCTCTATTCTGGCGGATACCATCCCCTGTGAAAAG CTGCGCGTTCGAGAAACGGAGCCGGTGACCGTAGGCGCCTAA
Upstream 100 bases:
>100_bases TCTGCCAGTTGGGATCGCCGTATCGCAGACTACCGCAGTGATCCCCAGGCGGTGTTAGGGTAGATGATAGGCTGAGCAAA GTGGGCTGGTGATCTGAACA
Downstream 100 bases:
>100_bases ATCCCCAGAGGCCAGCGGTGCGGACTAGGTTTCGCGGCCTTGTTGCCTTCTCTCCTCACTCTCTGGGCTGGGGGAAGGCT GAGGCGAGGGGCTGGCGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 93
Protein sequence:
>93_residues MQTLDAIPDKKRAERITCSYINATSSIQVVRITNIENWYFERVVFPGQRLLFEAVPGAKLEIHTGMMASSILADTIPCEK LRVRETEPVTVGA
Sequences:
>Translated_93_residues MQTLDAIPDKKRAERITCSYINATSSIQVVRITNIENWYFERVVFPGQRLLFEAVPGAKLEIHTGMMASSILADTIPCEK LRVRETEPVTVGA >Mature_93_residues MQTLDAIPDKKRAERITCSYINATSSIQVVRITNIENWYFERVVFPGQRLLFEAVPGAKLEIHTGMMASSILADTIPCEK LRVRETEPVTVGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014964 [H]
Pfam domain/function: PF08865 DUF1830 [H]
EC number: NA
Molecular weight: Translated: 10437; Mature: 10437
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTLDAIPDKKRAERITCSYINATSSIQVVRITNIENWYFERVVFPGQRLLFEAVPGAKL CCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCEEEEEEECCCCEEEEECCCCCEE EIHTGMMASSILADTIPCEKLRVRETEPVTVGA EEECCHHHHHHHHCCCCCCCEEECCCCCEEECC >Mature Secondary Structure MQTLDAIPDKKRAERITCSYINATSSIQVVRITNIENWYFERVVFPGQRLLFEAVPGAKL CCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCEEEEEEECCCCEEEEECCCCCEE EIHTGMMASSILADTIPCEKLRVRETEPVTVGA EEECCHHHHHHHHCCCCCCCEEECCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]