Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
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Accession | NC_007776 |
Length | 3,046,682 |
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The map label for this gene is fur [C]
Identifier: 86608793
GI number: 86608793
Start: 1381004
End: 1381438
Strand: Direct
Name: fur [C]
Synonym: CYB_1319
Alternate gene names: 86608793
Gene position: 1381004-1381438 (Clockwise)
Preceding gene: 86608786
Following gene: 86608798
Centisome position: 45.33
GC content: 58.16
Gene sequence:
>435_bases ATGCCTCGCCCCTTGGATTCTTTGGAAGCTGCTTTGGAACGGTGCCGGGAGTGCAATCTGCGTTTGAGCCGACAGCGCCG TTATATCCTGGAGCTGCTGTGGCAGTGTGGCGAGCACCTCTCCGCCCGCGAGATTTACGATCGCCTAAATCAGCAGGGCA AACCGATTGGCCACACGTCCGTTTATCAAAACCTGGAAGCTTTGGCCAGCCACAACATTGTCGAGTGCTTGGATCGTGCC GATGGGCGCCGCTACGGCAACCGCACCCATCCCCACAGCCACGTGAACTGTCTGGATAGCAACCGCATCTTGGATGTGGA CGTGGAGCTGCCGCCTGAACTGCTGGCCCAAGTGGAGCAACAAACGGGCACCCGCATCCAAAGTTACCGCATTGAGTTTT TTGGGGTGGAAAAGCCTGCGGAGCCCCAGCGGTAA
Upstream 100 bases:
>100_bases GAGTTCGGGGTGTTTTTTGAACAACTGTTGACGCACAAATGCTACCTTGGTAGAGATGAGCAACTACCTATCTCAGACTC GGTATGACTTGAGGTTTTCC
Downstream 100 bases:
>100_bases CCTTGGCAAAGGGATCCCTGCTGCCCTGAGCAAAAGTTGGGCAAAGGTCAGTAAGCTCGATTTTGGCCTTTGCCGATTTG CGACTGGATTTGCTCGAGAG
Product: FUR family transcriptional regulator
Products: NA
Alternate protein names: Ferric Uptake Regulator Fur Family; Ferric Uptake Regulation Protein; Ferric Uptake Regulator; Transcriptional Regulator Fur Family; FUR Family Transcriptional Regulator; Ferric-Uptake Regulator; Transcriptional Regulator Fur Family Protein; Fur Family Ferric Uptake Regulator; Ferric Uptake Regulatory Protein
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MPRPLDSLEAALERCRECNLRLSRQRRYILELLWQCGEHLSAREIYDRLNQQGKPIGHTSVYQNLEALASHNIVECLDRA DGRRYGNRTHPHSHVNCLDSNRILDVDVELPPELLAQVEQQTGTRIQSYRIEFFGVEKPAEPQR
Sequences:
>Translated_144_residues MPRPLDSLEAALERCRECNLRLSRQRRYILELLWQCGEHLSAREIYDRLNQQGKPIGHTSVYQNLEALASHNIVECLDRA DGRRYGNRTHPHSHVNCLDSNRILDVDVELPPELLAQVEQQTGTRIQSYRIEFFGVEKPAEPQR >Mature_143_residues PRPLDSLEAALERCRECNLRLSRQRRYILELLWQCGEHLSAREIYDRLNQQGKPIGHTSVYQNLEALASHNIVECLDRAD GRRYGNRTHPHSHVNCLDSNRILDVDVELPPELLAQVEQQTGTRIQSYRIEFFGVEKPAEPQR
Specific function: Acts As A Global Negative Controlling Element, Employing Fe(2+) As A Cofactor To Bind The Operator Of The Repressed Genes. Regulates The Expression Of Several Outer-Membrane Proteins Including The Iron Transport Operon. [C]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16758; Mature: 16627
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRPLDSLEAALERCRECNLRLSRQRRYILELLWQCGEHLSAREIYDRLNQQGKPIGHTS CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHH VYQNLEALASHNIVECLDRADGRRYGNRTHPHSHVNCLDSNRILDVDVELPPELLAQVEQ HHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHH QTGTRIQSYRIEFFGVEKPAEPQR HHCCHHHHHHEEEEECCCCCCCCC >Mature Secondary Structure PRPLDSLEAALERCRECNLRLSRQRRYILELLWQCGEHLSAREIYDRLNQQGKPIGHTS CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHH VYQNLEALASHNIVECLDRADGRRYGNRTHPHSHVNCLDSNRILDVDVELPPELLAQVEQ HHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHH QTGTRIQSYRIEFFGVEKPAEPQR HHCCHHHHHHEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA