Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608785

Identifier: 86608785

GI number: 86608785

Start: 1373768

End: 1375492

Strand: Direct

Name: 86608785

Synonym: CYB_1310

Alternate gene names: NA

Gene position: 1373768-1375492 (Clockwise)

Preceding gene: 86608784

Following gene: 86608786

Centisome position: 45.09

GC content: 61.04

Gene sequence:

>1725_bases
ATGGATACGACTGACCTCAGCGCCGTTGCCGACCGAACGTTACGGCTGCGTTCTGACCGGCAAACCTTCGATCAACGGGC
GGAAGTCTTCCAAGCAGAAGGCAATGTGGAGATGCGGCTGGGCCGCTCTGTGTTGCGGGCGGATCGCCTGCGCATTGAAC
TGCGACAGCGGCGGGCTGTGGCCGAGGGCAATGTTTCTATTCAACTGGATCGGCAGCGCATTCAGGGATCCCGGCTGGAG
TACGACTTTGAGCAAGAGCGGGGATTTTTGGAAGAGGCCTTCGGGCAGGTGGATATTGGCCAGTTGCAGGCCAGTGGATC
CCCGGCAGCCGCCCTCTCTCCGCAGCGGCTGGTGCGCTTTCGTGCCGTTCGCATCCGCTTCGATGCCACCACCTGGGAAG
GAGAACAGGTGCGGCTGACCAACGACCCGCTGGATCCGCCGGAGTTGGAGATTCGTAGCCCACGGGTGACCTCCACTCTT
CAGGCAGATGGTTCCAGCCTGCTGATTGCCGAGGCCGGCCAACTGGCCTTCGACCAGGTCTTGTTTCTGCCTCTGCCCAT
TCGGTTGCGCTTCGACTCATTAAACCGTCAGCCTCCGGTCAGCATCTTCTACGACGATTTCGACCGAGAAGAATTGCGAC
GGGGCCTGATCCTGCAACCCAACTTCGAGCTGCTGCGGGATCCCAACGTGAGCTTGGTGCTCTCCCCGCAACTGTATCCA
CAACGTCTTTGGGGCAGTGAGCAGGGCCTTTTGGATGGGATCGGGCTGCGGGCCGATTTTCGTTGGCGGCAACCGGAAGC
CAACGCTCAAACCTCGCTGTTTGCCGAGCTGCGGGGGATCGTCTTCCAGGAGTTTGCTCAGCGCTTGCGAGCCCAGGTCG
AACACCGCATCACCACCGGCGATGGCGGAGAAGTCGCCTACACCTACGCCTATCGGGAACGCTTCTTCAGCGGTCGCCTG
GGGTTTCAAATTGTGGAAAACCGCCTCGGTGCCAGCTACCGCTCACCCACCCTCCGCCTGGGCAATACCGGCTTGGATCT
CAGCTACCGCATAGCCGCCGACTACATTGATGCCTTGGGGCAGCCGGATGAAATCGACACGGATCCGGAGTTGGCCTTAG
CCAACACCACCGACCGCATTCAGCTCTCCCGCCTGCAACTGGGGGCAACCTTGAATCGCTCCTTTCCCCTCTGGAGCCCT
CCCAAGACGGCGGCGGATCCCCCACCCCGCTTTTCCGCTCTGCCCATCGAGCAAGGGATCTGGCTCAGCACCGGTGTGAG
CAGCAGCCAGTCTTTTTACTCTAATGGCCGAGCCCAGAGCTATACTGCCGGCAGTATTGGCATTGATGCGGTGATTGGGG
CTTTTGTGGCCGATACCTTCGACTACACCAACCTGAGGGTGACCTACTCCAACGGTTTTCTGGCCGGAGCCTCGCCATTT
TTGTTTGACCGCATCACCACGCGGGAACAGCTCGTCCTGGGCTTTTTGCAACAACTGTACGGCCCGCTGCGGGTAGGGGC
AGAGACAACGGTAGATTTGCAGTCGGGCCAGCAGGTGGATGTCGTCTATCGCCTGGGCTACGACCGCCGCACCTATGGCT
TTAGCCTGCAGTACAATCCGGTGCGCCAGTCGGGGGCTCTGGAGCTGCGGGTGGAGGGCCTGAACTGGGATCCCGGCCAA
TCCTCGCCGCAGCCGACGACCGGATCGAGGATCCAAGAGCCCTGA

Upstream 100 bases:

>100_bases
GTTGCGGTTGCTCTGGCTCTGCTTGGGGGTGCTGGGGTTGGCAGTTGCCGGCCCTACTGCGGCTCAGGTGGAGTCCCAGA
AGAAGGGGGGCGCTCAGCCC

Downstream 100 bases:

>100_bases
TCCCCAAACTCCAAGGGAACGGAAAAATGTAATCCTGACTACTACTCTGTGGAGATTTTCTATGAGAAATTGTCCCATAT
TGGGGAAAAATCCTAATTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 574; Mature: 574

Protein sequence:

>574_residues
MDTTDLSAVADRTLRLRSDRQTFDQRAEVFQAEGNVEMRLGRSVLRADRLRIELRQRRAVAEGNVSIQLDRQRIQGSRLE
YDFEQERGFLEEAFGQVDIGQLQASGSPAAALSPQRLVRFRAVRIRFDATTWEGEQVRLTNDPLDPPELEIRSPRVTSTL
QADGSSLLIAEAGQLAFDQVLFLPLPIRLRFDSLNRQPPVSIFYDDFDREELRRGLILQPNFELLRDPNVSLVLSPQLYP
QRLWGSEQGLLDGIGLRADFRWRQPEANAQTSLFAELRGIVFQEFAQRLRAQVEHRITTGDGGEVAYTYAYRERFFSGRL
GFQIVENRLGASYRSPTLRLGNTGLDLSYRIAADYIDALGQPDEIDTDPELALANTTDRIQLSRLQLGATLNRSFPLWSP
PKTAADPPPRFSALPIEQGIWLSTGVSSSQSFYSNGRAQSYTAGSIGIDAVIGAFVADTFDYTNLRVTYSNGFLAGASPF
LFDRITTREQLVLGFLQQLYGPLRVGAETTVDLQSGQQVDVVYRLGYDRRTYGFSLQYNPVRQSGALELRVEGLNWDPGQ
SSPQPTTGSRIQEP

Sequences:

>Translated_574_residues
MDTTDLSAVADRTLRLRSDRQTFDQRAEVFQAEGNVEMRLGRSVLRADRLRIELRQRRAVAEGNVSIQLDRQRIQGSRLE
YDFEQERGFLEEAFGQVDIGQLQASGSPAAALSPQRLVRFRAVRIRFDATTWEGEQVRLTNDPLDPPELEIRSPRVTSTL
QADGSSLLIAEAGQLAFDQVLFLPLPIRLRFDSLNRQPPVSIFYDDFDREELRRGLILQPNFELLRDPNVSLVLSPQLYP
QRLWGSEQGLLDGIGLRADFRWRQPEANAQTSLFAELRGIVFQEFAQRLRAQVEHRITTGDGGEVAYTYAYRERFFSGRL
GFQIVENRLGASYRSPTLRLGNTGLDLSYRIAADYIDALGQPDEIDTDPELALANTTDRIQLSRLQLGATLNRSFPLWSP
PKTAADPPPRFSALPIEQGIWLSTGVSSSQSFYSNGRAQSYTAGSIGIDAVIGAFVADTFDYTNLRVTYSNGFLAGASPF
LFDRITTREQLVLGFLQQLYGPLRVGAETTVDLQSGQQVDVVYRLGYDRRTYGFSLQYNPVRQSGALELRVEGLNWDPGQ
SSPQPTTGSRIQEP
>Mature_574_residues
MDTTDLSAVADRTLRLRSDRQTFDQRAEVFQAEGNVEMRLGRSVLRADRLRIELRQRRAVAEGNVSIQLDRQRIQGSRLE
YDFEQERGFLEEAFGQVDIGQLQASGSPAAALSPQRLVRFRAVRIRFDATTWEGEQVRLTNDPLDPPELEIRSPRVTSTL
QADGSSLLIAEAGQLAFDQVLFLPLPIRLRFDSLNRQPPVSIFYDDFDREELRRGLILQPNFELLRDPNVSLVLSPQLYP
QRLWGSEQGLLDGIGLRADFRWRQPEANAQTSLFAELRGIVFQEFAQRLRAQVEHRITTGDGGEVAYTYAYRERFFSGRL
GFQIVENRLGASYRSPTLRLGNTGLDLSYRIAADYIDALGQPDEIDTDPELALANTTDRIQLSRLQLGATLNRSFPLWSP
PKTAADPPPRFSALPIEQGIWLSTGVSSSQSFYSNGRAQSYTAGSIGIDAVIGAFVADTFDYTNLRVTYSNGFLAGASPF
LFDRITTREQLVLGFLQQLYGPLRVGAETTVDLQSGQQVDVVYRLGYDRRTYGFSLQYNPVRQSGALELRVEGLNWDPGQ
SSPQPTTGSRIQEP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64516; Mature: 64516

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTTDLSAVADRTLRLRSDRQTFDQRAEVFQAEGNVEMRLGRSVLRADRLRIELRQRRAV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEHHHHHHHHHHHHHHHHHHHHH
AEGNVSIQLDRQRIQGSRLEYDFEQERGFLEEAFGQVDIGQLQASGSPAAALSPQRLVRF
HCCCEEEEEEHHHCCCCCCCCCHHHHCCHHHHHHCCCCHHHEECCCCCCCCCCHHHHHEE
RAVRIRFDATTWEGEQVRLTNDPLDPPELEIRSPRVTSTLQADGSSLLIAEAGQLAFDQV
EEEEEEEECCCCCCCEEEECCCCCCCCCCEECCCCCCEEEECCCCEEEEEECCCHHHHEE
LFLPLPIRLRFDSLNRQPPVSIFYDDFDREELRRGLILQPNFELLRDPNVSLVLSPQLYP
EEECCCEEEEECCCCCCCCEEEEECCCCHHHHHCCCEECCCHHHHCCCCCEEEECCCCCH
QRLWGSEQGLLDGIGLRADFRWRQPEANAQTSLFAELRGIVFQEFAQRLRAQVEHRITTG
HHHCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC
DGGEVAYTYAYRERFFSGRLGFQIVENRLGASYRSPTLRLGNTGLDLSYRIAADYIDALG
CCCCEEEEEHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEECCCCCCEEEEHHHHHHHHCC
QPDEIDTDPELALANTTDRIQLSRLQLGATLNRSFPLWSPPKTAADPPPRFSALPIEQGI
CCCCCCCCCCEEEECCCCCEEEEEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCE
WLSTGVSSSQSFYSNGRAQSYTAGSIGIDAVIGAFVADTFDYTNLRVTYSNGFLAGASPF
EEECCCCCCHHHHHCCCCCEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCEECCCCCH
LFDRITTREQLVLGFLQQLYGPLRVGAETTVDLQSGQQVDVVYRLGYDRRTYGFSLQYNP
HHHHHCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEECCCCEEEEEEEEECC
VRQSGALELRVEGLNWDPGQSSPQPTTGSRIQEP
CCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDTTDLSAVADRTLRLRSDRQTFDQRAEVFQAEGNVEMRLGRSVLRADRLRIELRQRRAV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEHHHHHHHHHHHHHHHHHHHHH
AEGNVSIQLDRQRIQGSRLEYDFEQERGFLEEAFGQVDIGQLQASGSPAAALSPQRLVRF
HCCCEEEEEEHHHCCCCCCCCCHHHHCCHHHHHHCCCCHHHEECCCCCCCCCCHHHHHEE
RAVRIRFDATTWEGEQVRLTNDPLDPPELEIRSPRVTSTLQADGSSLLIAEAGQLAFDQV
EEEEEEEECCCCCCCEEEECCCCCCCCCCEECCCCCCEEEECCCCEEEEEECCCHHHHEE
LFLPLPIRLRFDSLNRQPPVSIFYDDFDREELRRGLILQPNFELLRDPNVSLVLSPQLYP
EEECCCEEEEECCCCCCCCEEEEECCCCHHHHHCCCEECCCHHHHCCCCCEEEECCCCCH
QRLWGSEQGLLDGIGLRADFRWRQPEANAQTSLFAELRGIVFQEFAQRLRAQVEHRITTG
HHHCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC
DGGEVAYTYAYRERFFSGRLGFQIVENRLGASYRSPTLRLGNTGLDLSYRIAADYIDALG
CCCCEEEEEHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEECCCCCCEEEEHHHHHHHHCC
QPDEIDTDPELALANTTDRIQLSRLQLGATLNRSFPLWSPPKTAADPPPRFSALPIEQGI
CCCCCCCCCCEEEECCCCCEEEEEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCE
WLSTGVSSSQSFYSNGRAQSYTAGSIGIDAVIGAFVADTFDYTNLRVTYSNGFLAGASPF
EEECCCCCCHHHHHCCCCCEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCEECCCCCH
LFDRITTREQLVLGFLQQLYGPLRVGAETTVDLQSGQQVDVVYRLGYDRRTYGFSLQYNP
HHHHHCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEECCCCEEEEEEEEECC
VRQSGALELRVEGLNWDPGQSSPQPTTGSRIQEP
CCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA