| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608486
Identifier: 86608486
GI number: 86608486
Start: 1047061
End: 1047564
Strand: Reverse
Name: 86608486
Synonym: CYB_1007
Alternate gene names: NA
Gene position: 1047564-1047061 (Counterclockwise)
Preceding gene: 86608487
Following gene: 86608485
Centisome position: 34.38
GC content: 55.16
Gene sequence:
>504_bases ATGATGGGCATTCTTCAGGGTCAAGTGGCCGGATCTGGGATCTGGAGACCAGCAGGAAGATGGTTCCTGAACAACATTGA GCTAGTCTTGACGGCGGTAGGAATAGGGGTGATTCTGCTAAGTGGTTTTGTGGCCAGCCGCAGCGCTTTTTCGCTAGAAA CGGCAACGGCGGTCAGCGCCACTTTGGTGGGGGTTATCCACGGGATCCTCTTTTGGCTGTTGCGACGGCGGCAGAGACAG GTGAGGCGGGAGGCAATCGGGCAAATTCGGGAAATGCTGGAAGATTTGGGCAAAAACCGCCTGCAAACCATCAAGATGAG CTTATACATGGTGCAGATCCATCAACCGGAGCAGGAAGAGCGAACCCGAAAAAGCTTTGACCGCGTTTACCAGATCCTGG CGGAGATGAGCACCTTGATCGACCACATTTCGGAAGAATCGTTGGCCGACTGGCGCCATCGCTACCGGCAGACTCTGCAG CGGGTTGAGTCGGAGTCTCAGTAG
Upstream 100 bases:
>100_bases GTCAACTGAGCCGTAGAAGACCGCGCCTGGCCTTGGGGCGGCTGAGCAGGTAGCGATGGGCTGAGCGAACGGGAGAGACG GAAGGGAGGTGCAAAAGGCT
Downstream 100 bases:
>100_bases TTTTTAAATCGTCTTTAAATCTTGAGTGGCTTAAGGGATCCCTTGAGGAGTTGGCTGAGCCGGTGGACGGTCGGATTTCG GGAAGCACCCAATTGCTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MMGILQGQVAGSGIWRPAGRWFLNNIELVLTAVGIGVILLSGFVASRSAFSLETATAVSATLVGVIHGILFWLLRRRQRQ VRREAIGQIREMLEDLGKNRLQTIKMSLYMVQIHQPEQEERTRKSFDRVYQILAEMSTLIDHISEESLADWRHRYRQTLQ RVESESQ
Sequences:
>Translated_167_residues MMGILQGQVAGSGIWRPAGRWFLNNIELVLTAVGIGVILLSGFVASRSAFSLETATAVSATLVGVIHGILFWLLRRRQRQ VRREAIGQIREMLEDLGKNRLQTIKMSLYMVQIHQPEQEERTRKSFDRVYQILAEMSTLIDHISEESLADWRHRYRQTLQ RVESESQ >Mature_167_residues MMGILQGQVAGSGIWRPAGRWFLNNIELVLTAVGIGVILLSGFVASRSAFSLETATAVSATLVGVIHGILFWLLRRRQRQ VRREAIGQIREMLEDLGKNRLQTIKMSLYMVQIHQPEQEERTRKSFDRVYQILAEMSTLIDHISEESLADWRHRYRQTLQ RVESESQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19193; Mature: 19193
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMGILQGQVAGSGIWRPAGRWFLNNIELVLTAVGIGVILLSGFVASRSAFSLETATAVSA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLVGVIHGILFWLLRRRQRQVRREAIGQIREMLEDLGKNRLQTIKMSLYMVQIHQPEQEE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHH RTRKSFDRVYQILAEMSTLIDHISEESLADWRHRYRQTLQRVESESQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MMGILQGQVAGSGIWRPAGRWFLNNIELVLTAVGIGVILLSGFVASRSAFSLETATAVSA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLVGVIHGILFWLLRRRQRQVRREAIGQIREMLEDLGKNRLQTIKMSLYMVQIHQPEQEE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHH RTRKSFDRVYQILAEMSTLIDHISEESLADWRHRYRQTLQRVESESQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA