Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608473

Identifier: 86608473

GI number: 86608473

Start: 1030047

End: 1031633

Strand: Reverse

Name: 86608473

Synonym: CYB_0994

Alternate gene names: NA

Gene position: 1031633-1030047 (Counterclockwise)

Preceding gene: 86608474

Following gene: 86608467

Centisome position: 33.86

GC content: 61.0

Gene sequence:

>1587_bases
TTGCCTAGAGCGGTTTGGCTAATCCTGGGGTTGGGCTTGTTCATGCGGGGCCTGGTGGCTGCCCTTTTGCCGCCTGGCTT
TGACGAAGCCTACTACTACCTCTACACCCGCCATCTGGATTGGAGCTATTTTGACCATCCGCCGCTGGTGGCCTGGACAA
CAGGCTTGGGGCCTGCCTTGACCGGCCAGGTGTCGGCTTTTTCTATTCGACTGGGATCCCTGCTGCTCTATTCTGGCTCT
TCCCTACTCCTTTACTACACCGGAGCACGCCTTTTCTCTGATCGGGCAGGACTGATCAGCTTGGCGGCCATCAGCATCGC
ACCCATCCTTTGGATTGGGTTTGGGGTGCTGACCCTGCCGGATAGTCCGCTGGTCTTTTTTACGGCAGCAACCCTATGGG
TGGCCAGCCAGGAGTTTTTCCCGGTGCCTTTGGGGCAGGGGAAATTGGGAGTCTATGGGGCGGCTCGCTATCGGCCAGGG
CCTAGGCTAGCGCTCATAGGTCTCTTGGTGGGGCTGGCCTGTCTGGGGAAATACCACGGCTTGGCTTTGGGGTTCGGCCT
GGTACTCTTTTGTCTGCTCAGCCCAGTTCATCGCTGTGCCTTGAGGTCGGGCTGGACGGTGCTGGCGGTGCTGGGTTTTG
TGCTGGCCTTCAGCCCGGTGCTGATCTGGAACGCCCAGCAGGATTGGGTCTCCTTTCGCTTTCAGGGGGGGCGGGCGGTG
CCGGAGGCAGGGTATCAACTGCAAGCGCTGGGGCTGACGATCCTTTCTGAAATCTTTTACCTGTTCCCCAGCTTGGGGAT
CCCTTTGGGGTGGGCGAGTTTGGCAGGGACGGGTCGGGTGGCCCTGCAGATTCTCCGCGGGATGCGGCTGACGGATGAAG
AGCTCAAGCACCTTTTGATCCTGGCCTGTGGATTACCGCTGGTGTTGGCCTTTACCTTGATGGGAGGCTACCGGCCCATC
TTGCCCACCTGGCCCATGCCGGGGTTTTGGGTGCTGACGCTGCTGCTGGGATCCTTCTGGGAACGGTGGCCGGGAGCGAA
GCGAACCTTAGTGGGGACGGCGGTGATGGTCAGCTTGGTGGTGGGGGTGGGGCTGGCCCATGTGCGCTATGGCCTGCTGC
AGGCTCCTGGCGGGCTGGGCCTGTGGCCCGTGGAGCAGGATCCCTCTACTCAGCTCATTGAAATTGAGCAGTTGCGGCAG
CGGTTTCGGACGGATCCCCACCTGGCTCAAGCCCTTGAGGAGGCAGAGTTCGTTTTTACCAATGTCTATTTTTTGGGCGG
TCAGATCGCCATGGCCCTGGCTCCGCTGACGGACAAGCCTCTGACCTGCCTGGATGCGGATTTGCGGGGCTTTGCCTTTT
GGTCGCAGCCGCAGGACTGGCTGGGGCAGGATGGGCTGCTCATCACTTCCAAGCTGTTCCAGCCGAGGGCAGGGATCCCA
GCCACCTATGGCGACTACTTTGCCCAAATCGAGCCTGTGGCCGAGGTTCCCCTGGTGCGGGCAGGGGCGGTGGCGCAAAC
CTTTCAGGTGTACCTGGCTCGACAGATGCGCAAGCCCTATCCCCGCCCTTATTCCCGCCTGCAATAA

Upstream 100 bases:

>100_bases
TTTTTTGCGGGAAACAAAGTCATAGTGCTAGAGGGACGTAGCCCCGAGAGGTATTCAAGGTAAGTTAGATCTGTCCATCT
GCCCATAGGGATCCCCTCCA

Downstream 100 bases:

>100_bases
CAGCAGAGGACATCCTGGGCAAAGCTAGAGGGGGCGATGTCTGTCGAACCAGCGCATCAGCATTGCAGCCAAGCGTTCGG
GGTTGTGGCGCACCAAGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: Glycosyl Transferase Family; Dolichyl-Phosphate-Mannose-Protein Mannosyltransferase; Dolichyl-Phosphate Beta-D-Mannosyltransferase; Glycosyl Transferase; 4-Amino-4-Deoxy-L-Arabinose Transferase; Glycosyl/Arabinosyl/Mannosyl Transferase; Undecaprenyl-PhosphomannoseProtein Mannosyltransferase; Glycosyltransferase; Dolichol Monophosphate Mannose Synthase

Number of amino acids: Translated: 528; Mature: 527

Protein sequence:

>528_residues
MPRAVWLILGLGLFMRGLVAALLPPGFDEAYYYLYTRHLDWSYFDHPPLVAWTTGLGPALTGQVSAFSIRLGSLLLYSGS
SLLLYYTGARLFSDRAGLISLAAISIAPILWIGFGVLTLPDSPLVFFTAATLWVASQEFFPVPLGQGKLGVYGAARYRPG
PRLALIGLLVGLACLGKYHGLALGFGLVLFCLLSPVHRCALRSGWTVLAVLGFVLAFSPVLIWNAQQDWVSFRFQGGRAV
PEAGYQLQALGLTILSEIFYLFPSLGIPLGWASLAGTGRVALQILRGMRLTDEELKHLLILACGLPLVLAFTLMGGYRPI
LPTWPMPGFWVLTLLLGSFWERWPGAKRTLVGTAVMVSLVVGVGLAHVRYGLLQAPGGLGLWPVEQDPSTQLIEIEQLRQ
RFRTDPHLAQALEEAEFVFTNVYFLGGQIAMALAPLTDKPLTCLDADLRGFAFWSQPQDWLGQDGLLITSKLFQPRAGIP
ATYGDYFAQIEPVAEVPLVRAGAVAQTFQVYLARQMRKPYPRPYSRLQ

Sequences:

>Translated_528_residues
MPRAVWLILGLGLFMRGLVAALLPPGFDEAYYYLYTRHLDWSYFDHPPLVAWTTGLGPALTGQVSAFSIRLGSLLLYSGS
SLLLYYTGARLFSDRAGLISLAAISIAPILWIGFGVLTLPDSPLVFFTAATLWVASQEFFPVPLGQGKLGVYGAARYRPG
PRLALIGLLVGLACLGKYHGLALGFGLVLFCLLSPVHRCALRSGWTVLAVLGFVLAFSPVLIWNAQQDWVSFRFQGGRAV
PEAGYQLQALGLTILSEIFYLFPSLGIPLGWASLAGTGRVALQILRGMRLTDEELKHLLILACGLPLVLAFTLMGGYRPI
LPTWPMPGFWVLTLLLGSFWERWPGAKRTLVGTAVMVSLVVGVGLAHVRYGLLQAPGGLGLWPVEQDPSTQLIEIEQLRQ
RFRTDPHLAQALEEAEFVFTNVYFLGGQIAMALAPLTDKPLTCLDADLRGFAFWSQPQDWLGQDGLLITSKLFQPRAGIP
ATYGDYFAQIEPVAEVPLVRAGAVAQTFQVYLARQMRKPYPRPYSRLQ
>Mature_527_residues
PRAVWLILGLGLFMRGLVAALLPPGFDEAYYYLYTRHLDWSYFDHPPLVAWTTGLGPALTGQVSAFSIRLGSLLLYSGSS
LLLYYTGARLFSDRAGLISLAAISIAPILWIGFGVLTLPDSPLVFFTAATLWVASQEFFPVPLGQGKLGVYGAARYRPGP
RLALIGLLVGLACLGKYHGLALGFGLVLFCLLSPVHRCALRSGWTVLAVLGFVLAFSPVLIWNAQQDWVSFRFQGGRAVP
EAGYQLQALGLTILSEIFYLFPSLGIPLGWASLAGTGRVALQILRGMRLTDEELKHLLILACGLPLVLAFTLMGGYRPIL
PTWPMPGFWVLTLLLGSFWERWPGAKRTLVGTAVMVSLVVGVGLAHVRYGLLQAPGGLGLWPVEQDPSTQLIEIEQLRQR
FRTDPHLAQALEEAEFVFTNVYFLGGQIAMALAPLTDKPLTCLDADLRGFAFWSQPQDWLGQDGLLITSKLFQPRAGIPA
TYGDYFAQIEPVAEVPLVRAGAVAQTFQVYLARQMRKPYPRPYSRLQ

Specific function: Unknown

COG id: COG1807

COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57911; Mature: 57780

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRAVWLILGLGLFMRGLVAALLPPGFDEAYYYLYTRHLDWSYFDHPPLVAWTTGLGPAL
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCEEEECCCCCCC
TGQVSAFSIRLGSLLLYSGSSLLLYYTGARLFSDRAGLISLAAISIAPILWIGFGVLTLP
CCCCEEEEEEHHEEEEECCCEEEEEEECCHHHCCCCCHHHHHHHHHHHHHHHHCCCEECC
DSPLVFFTAATLWVASQEFFPVPLGQGKLGVYGAARYRPGPRLALIGLLVGLACLGKYHG
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
LALGFGLVLFCLLSPVHRCALRSGWTVLAVLGFVLAFSPVLIWNAQQDWVSFRFQGGRAV
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEECCCHHHEEEEECCCCCC
PEAGYQLQALGLTILSEIFYLFPSLGIPLGWASLAGTGRVALQILRGMRLTDEELKHLLI
CCCCCEEHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHCCCCCHHHHHHHHH
LACGLPLVLAFTLMGGYRPILPTWPMPGFWVLTLLLGSFWERWPGAKRTLVGTAVMVSLV
HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
VGVGLAHVRYGLLQAPGGLGLWPVEQDPSTQLIEIEQLRQRFRTDPHLAQALEEAEFVFT
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
NVYFLGGQIAMALAPLTDKPLTCLDADLRGFAFWSQPQDWLGQDGLLITSKLFQPRAGIP
HHHHCCCCEEHHEECCCCCCCHHCCCCCCCEEECCCCHHHCCCCCEEEEHHHCCCCCCCC
ATYGDYFAQIEPVAEVPLVRAGAVAQTFQVYLARQMRKPYPRPYSRLQ
CCHHHHHHHCCCHHHCCCHHCCHHHHHHHHHHHHHHCCCCCCCHHHCC
>Mature Secondary Structure 
PRAVWLILGLGLFMRGLVAALLPPGFDEAYYYLYTRHLDWSYFDHPPLVAWTTGLGPAL
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCEEEECCCCCCC
TGQVSAFSIRLGSLLLYSGSSLLLYYTGARLFSDRAGLISLAAISIAPILWIGFGVLTLP
CCCCEEEEEEHHEEEEECCCEEEEEEECCHHHCCCCCHHHHHHHHHHHHHHHHCCCEECC
DSPLVFFTAATLWVASQEFFPVPLGQGKLGVYGAARYRPGPRLALIGLLVGLACLGKYHG
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
LALGFGLVLFCLLSPVHRCALRSGWTVLAVLGFVLAFSPVLIWNAQQDWVSFRFQGGRAV
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEECCCHHHEEEEECCCCCC
PEAGYQLQALGLTILSEIFYLFPSLGIPLGWASLAGTGRVALQILRGMRLTDEELKHLLI
CCCCCEEHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHCCCCCHHHHHHHHH
LACGLPLVLAFTLMGGYRPILPTWPMPGFWVLTLLLGSFWERWPGAKRTLVGTAVMVSLV
HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
VGVGLAHVRYGLLQAPGGLGLWPVEQDPSTQLIEIEQLRQRFRTDPHLAQALEEAEFVFT
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
NVYFLGGQIAMALAPLTDKPLTCLDADLRGFAFWSQPQDWLGQDGLLITSKLFQPRAGIP
HHHHCCCCEEHHEECCCCCCCHHCCCCCCCEEECCCCHHHCCCCCEEEEHHHCCCCCCCC
ATYGDYFAQIEPVAEVPLVRAGAVAQTFQVYLARQMRKPYPRPYSRLQ
CCHHHHHHHCCCHHHCCCHHCCHHHHHHHHHHHHHHCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA