Click here to switch to the map view.

The map label for this gene is 86608467

Identifier: 86608467

GI number: 86608467

Start: 1023740

End: 1024873

Strand: Reverse

Name: 86608467

Synonym: CYB_0988

Alternate gene names: NA

Gene position: 1024873-1023740 (Counterclockwise)

Preceding gene: 86608473

Following gene: 86608466

Centisome position: 33.64

GC content: 59.26

Gene sequence:

>1134_bases
ATGCTAGACGCTTTACTGATCGCGATCTTCATGTTGGCCGGGGCTGGTCTCGGGTTTTACGGCCTGGATTTGCTCCCTCC
TGCCGCCATTCAGGGGGCCAATGTGGAAGGAGCCCGTGTCGTCACCAGCGGCTTTGGCGTGCTGGCAGGACTGGCTTTGG
GATCCCTGGTGCGCTGGAGCTACCGTCGCTTCGAGGCCAATGTGCGCTCCTTGCCGCCGGACGTGTTGATCAGCCGCTCG
GTGGGGTTGGTGATCGGCTTGGTGATTGCCAATCTGGCCATGGCTCCTGTCTACTTGCTGCCCCTGCCCCCCCAACTCAA
TAGGTTCCTCGAGCCGCTGGCTTCGGTCTTTTTCAGCTTGGCCTTTGCCTATCTGGGGGTCAGCCTGGCCGATACCCACG
GCCCCTCGCTGCTGCGGCTGTTTAACCCCAACTATGCTTTGCAGGCAGCCCTCTGGGCGGAGGGCAATGTGGTGGCTGCC
ACGGCCAAGGTTTTGGACACCAGCTCCATCATCGATGGCCGAGTGGCTCAGTTAATCGAGACAGGTTTTTTGGAAGGAAC
CCTGGTGGTTCCTCGCTTTGTGCTGACGGAATTGCAGACCATTGCCGACAAAGCCGATGCCCAAAAACGAGAGCGGGGCC
GCAAAGGCTTGGATACCCTGCAGTCTTTGCGAGAGGCCTACCCCGATCGTTTCGTTATTCACGAAGCCAACTATCCAGAT
CTGACCACTGTCGATGAAAAGCTGGTGCGCCTCACCCAAACCGTGGGGGGAACGCTGCTTACCACCGATTACAACCTGAA
GAAGGTGGCGGCTCTGCAGGGGGTCAAGGTGCTGAATGTGAATGAGTTGGCCGAGGCGCTGCGGCCCATCTATGTTGCCG
GCGACAGCTTTGATATCAAGATCACCCGCGAAGGAAAAGAGCCAGGTCAAGGGGTGGGCTACTTGGAAGACGGCACCATG
GTGGTGGTGGAAGAAGGGCAGCGCTCTGTGGGCAAAACCCGCTCTGTAGTTGTGACCAGCTCCATTCAAACCTCAGCAGG
CCGCATGATCTTCGCCCGCCTCAACAAGGACTCTGCCCCACTAACCCGCCCGGCCTCTGATCCGGCCAGCCCGGCTTCCT
CTGGAAAAACCTGA

Upstream 100 bases:

>100_bases
TGTCCGGATCCCTCCAACACCAGACGACTAGAATGAGTAGGAAGCAGATTTGCCTATTCCCAGCAGCATCACCCACTCAG
CAGGGCCGTCTTTATTTCTT

Downstream 100 bases:

>100_bases
GTTTTGGCCTGTGTTCCCCTAACGCAATGGTGGTCTCCTCCCCCATGGGTGTGCTCCGACCCACTCCGATGTTCTACACG
CAGGATCGCCAGAGGCGCTT

Product: PilT domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MLDALLIAIFMLAGAGLGFYGLDLLPPAAIQGANVEGARVVTSGFGVLAGLALGSLVRWSYRRFEANVRSLPPDVLISRS
VGLVIGLVIANLAMAPVYLLPLPPQLNRFLEPLASVFFSLAFAYLGVSLADTHGPSLLRLFNPNYALQAALWAEGNVVAA
TAKVLDTSSIIDGRVAQLIETGFLEGTLVVPRFVLTELQTIADKADAQKRERGRKGLDTLQSLREAYPDRFVIHEANYPD
LTTVDEKLVRLTQTVGGTLLTTDYNLKKVAALQGVKVLNVNELAEALRPIYVAGDSFDIKITREGKEPGQGVGYLEDGTM
VVVEEGQRSVGKTRSVVVTSSIQTSAGRMIFARLNKDSAPLTRPASDPASPASSGKT

Sequences:

>Translated_377_residues
MLDALLIAIFMLAGAGLGFYGLDLLPPAAIQGANVEGARVVTSGFGVLAGLALGSLVRWSYRRFEANVRSLPPDVLISRS
VGLVIGLVIANLAMAPVYLLPLPPQLNRFLEPLASVFFSLAFAYLGVSLADTHGPSLLRLFNPNYALQAALWAEGNVVAA
TAKVLDTSSIIDGRVAQLIETGFLEGTLVVPRFVLTELQTIADKADAQKRERGRKGLDTLQSLREAYPDRFVIHEANYPD
LTTVDEKLVRLTQTVGGTLLTTDYNLKKVAALQGVKVLNVNELAEALRPIYVAGDSFDIKITREGKEPGQGVGYLEDGTM
VVVEEGQRSVGKTRSVVVTSSIQTSAGRMIFARLNKDSAPLTRPASDPASPASSGKT
>Mature_377_residues
MLDALLIAIFMLAGAGLGFYGLDLLPPAAIQGANVEGARVVTSGFGVLAGLALGSLVRWSYRRFEANVRSLPPDVLISRS
VGLVIGLVIANLAMAPVYLLPLPPQLNRFLEPLASVFFSLAFAYLGVSLADTHGPSLLRLFNPNYALQAALWAEGNVVAA
TAKVLDTSSIIDGRVAQLIETGFLEGTLVVPRFVLTELQTIADKADAQKRERGRKGLDTLQSLREAYPDRFVIHEANYPD
LTTVDEKLVRLTQTVGGTLLTTDYNLKKVAALQGVKVLNVNELAEALRPIYVAGDSFDIKITREGKEPGQGVGYLEDGTM
VVVEEGQRSVGKTRSVVVTSSIQTSAGRMIFARLNKDSAPLTRPASDPASPASSGKT

Specific function: Unknown

COG id: COG4956

COG function: function code R; Integral membrane protein (PIN domain superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TRAM domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716
- InterPro:   IPR006596
- InterPro:   IPR002792 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 40276; Mature: 40276

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: PS50926 TRAM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDALLIAIFMLAGAGLGFYGLDLLPPAAIQGANVEGARVVTSGFGVLAGLALGSLVRWS
CHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHH
YRRFEANVRSLPPDVLISRSVGLVIGLVIANLAMAPVYLLPLPPQLNRFLEPLASVFFSL
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHH
AFAYLGVSLADTHGPSLLRLFNPNYALQAALWAEGNVVAATAKVLDTSSIIDGRVAQLIE
HHHHHCCHHCCCCCCCEEEEECCCCEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHH
TGFLEGTLVVPRFVLTELQTIADKADAQKRERGRKGLDTLQSLREAYPDRFVIHEANYPD
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEECCCCCC
LTTVDEKLVRLTQTVGGTLLTTDYNLKKVAALQGVKVLNVNELAEALRPIYVAGDSFDIK
CCHHHHHHHHHHHHHCCEEEEECCCHHHHHHHCCCEEECHHHHHHHHCCEEEECCCEEEE
ITREGKEPGQGVGYLEDGTMVVVEEGQRSVGKTRSVVVTSSIQTSAGRMIFARLNKDSAP
EEECCCCCCCCCCEEECCCEEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCC
LTRPASDPASPASSGKT
CCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLDALLIAIFMLAGAGLGFYGLDLLPPAAIQGANVEGARVVTSGFGVLAGLALGSLVRWS
CHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHH
YRRFEANVRSLPPDVLISRSVGLVIGLVIANLAMAPVYLLPLPPQLNRFLEPLASVFFSL
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHH
AFAYLGVSLADTHGPSLLRLFNPNYALQAALWAEGNVVAATAKVLDTSSIIDGRVAQLIE
HHHHHCCHHCCCCCCCEEEEECCCCEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHH
TGFLEGTLVVPRFVLTELQTIADKADAQKRERGRKGLDTLQSLREAYPDRFVIHEANYPD
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEECCCCCC
LTTVDEKLVRLTQTVGGTLLTTDYNLKKVAALQGVKVLNVNELAEALRPIYVAGDSFDIK
CCHHHHHHHHHHHHHCCEEEEECCCHHHHHHHCCCEEECHHHHHHHHCCEEEECCCEEEE
ITREGKEPGQGVGYLEDGTMVVVEEGQRSVGKTRSVVVTSSIQTSAGRMIFARLNKDSAP
EEECCCCCCCCCCEEECCCEEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCC
LTRPASDPASPASSGKT
CCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]