Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608474

Identifier: 86608474

GI number: 86608474

Start: 1031709

End: 1032803

Strand: Reverse

Name: 86608474

Synonym: CYB_0995

Alternate gene names: NA

Gene position: 1032803-1031709 (Counterclockwise)

Preceding gene: 86608476

Following gene: 86608473

Centisome position: 33.9

GC content: 48.68

Gene sequence:

>1095_bases
ATGAAAAACCCAACTCACTTGCGTACATTCAATTCAACAGCTCAAACCTTTAACTTGCTTGATTTAAAACCTCTTCCCGG
CGCCTCGTGCAGTCAGCCACTCAATTTCCGCTCCTGGTTGGAGAGAGGGGAAGTTGAATACAGCACAGCGAAAACCGGAG
GACTTACTGCTTTTCATAATTTTTTAAACGCTTCGTATTCTCGGAAACAGACGACCGGCAGACTAGCAAGCCATAATCTA
AACAAATCCAGCTTTCTCGGAGTTAAGTCTATGAAATGCGTGGAGGAGAGCCACAACAAGCGCGTGTACCAAGAGCCTCC
CAAGTATTTATCTTTTGGGCTACTTCTTGCCTTCATTCCTCTATATGCCTCGACTTTACTTTGGTTGCACCAAGGCGATC
GCCACTTCACCTGCTTTCGAGTTGCCCAGTCTGCGGTTAACTGCGAAGTGTTTTTCCAGCCGTTGCTGCCTTTGCCAAGT
ACGACTGAACTCTACAAGGACGTGAGAGGGGCTGGAACCAAAACCGAAATCGAGACAGATGAAGATGGAGACAGAACAAC
CTACTACTATGTCACGCTGAAAACTCCTGCAGGAGAAAGGGAAGCCTGGTCGGCTTCCAGTGAGAGTGAGGCTCAGGAAC
TGGCAAGGCGCATTCAGTCTTTTGTGAACGGCACAGAGAGTCAGCTCTTGGTAGATAGCGATAAGTTCGACTTAGGAGAT
TTAGTGATTGTGATCTTGTTTTCCCTCATCTCATTGCCATTTCTTTTGATAGGGGTTTCTATGCTGATATCGGCTTTGTG
GCGCCGCCGCGTGACTTTGGACAGCTCCCTGTACCAAATCCAGGAGGAGTACCTCACTCCTTTTGGATCGCGAGGGCAGA
AAACTTATTCCTTCCGAGATGTGCAGCAGGTCACGGTTCAGGCCAGGACAGATTCTGATGGCGATACTAGCTTTTCGGTA
GAGGTGACATTGCAATCACAGAAGCCTTTGCTATCCATCTCCAGTGGCGGTGAATCAGAGGCGCGGGCAGAGGCCGAGAA
GCTGGGTCAATTTTTGGGGTGTCCGGTCATTTTTTTGCGGGAAACAAAGTCATAG

Upstream 100 bases:

>100_bases
ACATAATACCTCAGAACATGAATTAGGTGCGGGCAAATCCTCAGACTTTTCGCACTTGGATCCGCAGTTTTAAATCACAT
TCAAAAGAAACTGGGAGGAC

Downstream 100 bases:

>100_bases
TGCTAGAGGGACGTAGCCCCGAGAGGTATTCAAGGTAAGTTAGATCTGTCCATCTGCCCATAGGGATCCCCTCCATTGCC
TAGAGCGGTTTGGCTAATCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MKNPTHLRTFNSTAQTFNLLDLKPLPGASCSQPLNFRSWLERGEVEYSTAKTGGLTAFHNFLNASYSRKQTTGRLASHNL
NKSSFLGVKSMKCVEESHNKRVYQEPPKYLSFGLLLAFIPLYASTLLWLHQGDRHFTCFRVAQSAVNCEVFFQPLLPLPS
TTELYKDVRGAGTKTEIETDEDGDRTTYYYVTLKTPAGEREAWSASSESEAQELARRIQSFVNGTESQLLVDSDKFDLGD
LVIVILFSLISLPFLLIGVSMLISALWRRRVTLDSSLYQIQEEYLTPFGSRGQKTYSFRDVQQVTVQARTDSDGDTSFSV
EVTLQSQKPLLSISSGGESEARAEAEKLGQFLGCPVIFLRETKS

Sequences:

>Translated_364_residues
MKNPTHLRTFNSTAQTFNLLDLKPLPGASCSQPLNFRSWLERGEVEYSTAKTGGLTAFHNFLNASYSRKQTTGRLASHNL
NKSSFLGVKSMKCVEESHNKRVYQEPPKYLSFGLLLAFIPLYASTLLWLHQGDRHFTCFRVAQSAVNCEVFFQPLLPLPS
TTELYKDVRGAGTKTEIETDEDGDRTTYYYVTLKTPAGEREAWSASSESEAQELARRIQSFVNGTESQLLVDSDKFDLGD
LVIVILFSLISLPFLLIGVSMLISALWRRRVTLDSSLYQIQEEYLTPFGSRGQKTYSFRDVQQVTVQARTDSDGDTSFSV
EVTLQSQKPLLSISSGGESEARAEAEKLGQFLGCPVIFLRETKS
>Mature_364_residues
MKNPTHLRTFNSTAQTFNLLDLKPLPGASCSQPLNFRSWLERGEVEYSTAKTGGLTAFHNFLNASYSRKQTTGRLASHNL
NKSSFLGVKSMKCVEESHNKRVYQEPPKYLSFGLLLAFIPLYASTLLWLHQGDRHFTCFRVAQSAVNCEVFFQPLLPLPS
TTELYKDVRGAGTKTEIETDEDGDRTTYYYVTLKTPAGEREAWSASSESEAQELARRIQSFVNGTESQLLVDSDKFDLGD
LVIVILFSLISLPFLLIGVSMLISALWRRRVTLDSSLYQIQEEYLTPFGSRGQKTYSFRDVQQVTVQARTDSDGDTSFSV
EVTLQSQKPLLSISSGGESEARAEAEKLGQFLGCPVIFLRETKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40799; Mature: 40799

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNPTHLRTFNSTAQTFNLLDLKPLPGASCSQPLNFRSWLERGEVEYSTAKTGGLTAFHN
CCCCCCEEEECCHHHHEEEEECCCCCCCCCCCCCCHHHHHHCCCEEEECCCCCCHHHHHH
FLNASYSRKQTTGRLASHNLNKSSFLGVKSMKCVEESHNKRVYQEPPKYLSFGLLLAFIP
HHHCCCHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
LYASTLLWLHQGDRHFTCFRVAQSAVNCEVFFQPLLPLPSTTELYKDVRGAGTKTEIETD
HHHHHHHHHHCCCCCCHHHHHHHHHCCHHEEEECCCCCCCHHHHHHHHHCCCCCCCCCCC
EDGDRTTYYYVTLKTPAGEREAWSASSESEAQELARRIQSFVNGTESQLLVDSDKFDLGD
CCCCCEEEEEEEEECCCCCCHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHH
LVIVILFSLISLPFLLIGVSMLISALWRRRVTLDSSLYQIQEEYLTPFGSRGQKTYSFRD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
VQQVTVQARTDSDGDTSFSVEVTLQSQKPLLSISSGGESEARAEAEKLGQFLGCPVIFLR
HEEEEEEEECCCCCCCEEEEEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHCCCEEEEE
ETKS
CCCC
>Mature Secondary Structure
MKNPTHLRTFNSTAQTFNLLDLKPLPGASCSQPLNFRSWLERGEVEYSTAKTGGLTAFHN
CCCCCCEEEECCHHHHEEEEECCCCCCCCCCCCCCHHHHHHCCCEEEECCCCCCHHHHHH
FLNASYSRKQTTGRLASHNLNKSSFLGVKSMKCVEESHNKRVYQEPPKYLSFGLLLAFIP
HHHCCCHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
LYASTLLWLHQGDRHFTCFRVAQSAVNCEVFFQPLLPLPSTTELYKDVRGAGTKTEIETD
HHHHHHHHHHCCCCCCHHHHHHHHHCCHHEEEECCCCCCCHHHHHHHHHCCCCCCCCCCC
EDGDRTTYYYVTLKTPAGEREAWSASSESEAQELARRIQSFVNGTESQLLVDSDKFDLGD
CCCCCEEEEEEEEECCCCCCHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHH
LVIVILFSLISLPFLLIGVSMLISALWRRRVTLDSSLYQIQEEYLTPFGSRGQKTYSFRD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
VQQVTVQARTDSDGDTSFSVEVTLQSQKPLLSISSGGESEARAEAEKLGQFLGCPVIFLR
HEEEEEEEECCCCCCCEEEEEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHCCCEEEEE
ETKS
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA