Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608360

Identifier: 86608360

GI number: 86608360

Start: 907215

End: 908729

Strand: Direct

Name: 86608360

Synonym: CYB_0879

Alternate gene names: NA

Gene position: 907215-908729 (Clockwise)

Preceding gene: 86608359

Following gene: 86608361

Centisome position: 29.78

GC content: 58.35

Gene sequence:

>1515_bases
TTGAACGCTGCTCAACGGATTCTCAGACGCTCTGTCCTCAGGGGGCGAAGTCGCTGGCTGCTCCTCTACGAGAAGGGGAT
GGCCCTGCTGGCCCTGAGCAACCTGTGCTTGGTGCTCTTCGACATGAGCTATGTGCCTGGGCGAGATTTTTGGCTCCAGG
GTCGGGTGCAAATTTTTGGCGCCTTTGGTCCTCCCATTCCGCTGCCGATTCTCTCCGAAGAAACCAGCCGTTCCCCGGTG
ACCGACCTATACGATCCCATCAAAGGTATCGAGCCCAACCCCGAAACCCAGCGCTACTTGGCCTTGGTGGATGAGCTGCG
CCAGGTTACCCTGCGGTTTGGCGTGGAGTCGGAAGCGGCAGCACCGATCCTGGCCCGCTTGCGGGAGCTCAGCGACGAGA
TGATTGAGACCAATCCCTTTCAGGGCGCCAACAAAACTGGCCAGTTTGTGCGTATCCTCAATTTGATGCGGGAGCACATC
CCAGAAGCCGACTCTGCCAGAGCCGCCTTTGCCCGCTTTTGGACTGCTGAGTACTTGGCCAGCGCCGATCCCGCAGATGG
AATTGAATTTTTCCAGATCCGGCTGCGCCCCCTCTTTGAGACCAACTATTTCCGCCCCATTGGTGAGAGCGGTAACCCTG
TTGACTTTTTCCCGGTGCTGGATTTTCCCTTCGTGCTTCTGTTTGGGCTGGAATTTTTGCTGCGCACGGTGGCCATCAGC
CGCCGCTACACCGGCGTCAATTGGCTGGATGCCATGCTCTGGCGTTGGTACGATGTGCTGTTGCTGCTGCCCTTTTGGCG
CTGGCTGCGGGTGATCCCCGTCACCATCCGGCTGGGACAAGCACAGTTGCTGGATCTGGAGCGGGTACGCGCCCAGGTGA
GCCAGGGCTTTGTTACCAACTTCGCCGAGGATCTGACGGAAGTCATTGTCGTGCGGGTGATCAACCAAATCCAGGTATCC
ATTCAGCGGGGATCCCTGCCCCTACTGCCGGCAGCGCGTACCCAGCGCGACTACATTGATATCAACAACACCAACGAGCT
GGAGGCGATTGCCAACCTGGTTTTTCGCATTGTCCTCTACCGCGTTTTGCCCCAGGTGCAACCGGAATTGCAACAACTGC
TCCGCTACAACCTGGATGGCCTGCTCAAGCAGTTGCCTGCCATGCAAACTCTAGAACAGCTTCCCGGCCTGGGATCCCTG
CCTGGCCAACTGACGGAGCACCTGGCCAACGAGCTGACCACCACCACCTACAAAACCCTGACGGGCAGTTTCGAGGATCC
CGTCGGCTCCAAGCTGGCAGCGCAACTGATGCAGCGGTTTGGTGAGGTCTTGGCACGAGAACTCACCCAGGAGCACGCTC
TGGAGGAAATTCGCTCTCTCCTGCAAGACTTGCTGGAAGAGATCAAAATTAACTACGTCGAGCGGCTATCCCACGAGGAT
CTGGAGGAGGTGATGGAGCAAACCCGCCAGCTTCGGCAAAAGGCCCAGCAACTGGAGAAAGACCGCCGCCGATAG

Upstream 100 bases:

>100_bases
TGCACTACAGCTTGCTCAAGCCAAGGGTGGCTCACCCCAGGGGTGGTAGACTAAGGCTGACTCAAGCCAACTGGTTGACC
CAAGGCCGGGACGGAGTCCT

Downstream 100 bases:

>100_bases
AGTTCGGGGGATTGGTTGACGAGGTTTCGCCAGTTCAGTAGGATAATGATTCCAAGTCGGGCGAGTGGCGAAACTGGTAG
ACGCACCGCACTCAAAATGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 504; Mature: 504

Protein sequence:

>504_residues
MNAAQRILRRSVLRGRSRWLLLYEKGMALLALSNLCLVLFDMSYVPGRDFWLQGRVQIFGAFGPPIPLPILSEETSRSPV
TDLYDPIKGIEPNPETQRYLALVDELRQVTLRFGVESEAAAPILARLRELSDEMIETNPFQGANKTGQFVRILNLMREHI
PEADSARAAFARFWTAEYLASADPADGIEFFQIRLRPLFETNYFRPIGESGNPVDFFPVLDFPFVLLFGLEFLLRTVAIS
RRYTGVNWLDAMLWRWYDVLLLLPFWRWLRVIPVTIRLGQAQLLDLERVRAQVSQGFVTNFAEDLTEVIVVRVINQIQVS
IQRGSLPLLPAARTQRDYIDINNTNELEAIANLVFRIVLYRVLPQVQPELQQLLRYNLDGLLKQLPAMQTLEQLPGLGSL
PGQLTEHLANELTTTTYKTLTGSFEDPVGSKLAAQLMQRFGEVLARELTQEHALEEIRSLLQDLLEEIKINYVERLSHED
LEEVMEQTRQLRQKAQQLEKDRRR

Sequences:

>Translated_504_residues
MNAAQRILRRSVLRGRSRWLLLYEKGMALLALSNLCLVLFDMSYVPGRDFWLQGRVQIFGAFGPPIPLPILSEETSRSPV
TDLYDPIKGIEPNPETQRYLALVDELRQVTLRFGVESEAAAPILARLRELSDEMIETNPFQGANKTGQFVRILNLMREHI
PEADSARAAFARFWTAEYLASADPADGIEFFQIRLRPLFETNYFRPIGESGNPVDFFPVLDFPFVLLFGLEFLLRTVAIS
RRYTGVNWLDAMLWRWYDVLLLLPFWRWLRVIPVTIRLGQAQLLDLERVRAQVSQGFVTNFAEDLTEVIVVRVINQIQVS
IQRGSLPLLPAARTQRDYIDINNTNELEAIANLVFRIVLYRVLPQVQPELQQLLRYNLDGLLKQLPAMQTLEQLPGLGSL
PGQLTEHLANELTTTTYKTLTGSFEDPVGSKLAAQLMQRFGEVLARELTQEHALEEIRSLLQDLLEEIKINYVERLSHED
LEEVMEQTRQLRQKAQQLEKDRRR
>Mature_504_residues
MNAAQRILRRSVLRGRSRWLLLYEKGMALLALSNLCLVLFDMSYVPGRDFWLQGRVQIFGAFGPPIPLPILSEETSRSPV
TDLYDPIKGIEPNPETQRYLALVDELRQVTLRFGVESEAAAPILARLRELSDEMIETNPFQGANKTGQFVRILNLMREHI
PEADSARAAFARFWTAEYLASADPADGIEFFQIRLRPLFETNYFRPIGESGNPVDFFPVLDFPFVLLFGLEFLLRTVAIS
RRYTGVNWLDAMLWRWYDVLLLLPFWRWLRVIPVTIRLGQAQLLDLERVRAQVSQGFVTNFAEDLTEVIVVRVINQIQVS
IQRGSLPLLPAARTQRDYIDINNTNELEAIANLVFRIVLYRVLPQVQPELQQLLRYNLDGLLKQLPAMQTLEQLPGLGSL
PGQLTEHLANELTTTTYKTLTGSFEDPVGSKLAAQLMQRFGEVLARELTQEHALEEIRSLLQDLLEEIKINYVERLSHED
LEEVMEQTRQLRQKAQQLEKDRRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58028; Mature: 58028

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAAQRILRRSVLRGRSRWLLLYEKGMALLALSNLCLVLFDMSYVPGRDFWLQGRVQIFG
CCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCEEEEE
AFGPPIPLPILSEETSRSPVTDLYDPIKGIEPNPETQRYLALVDELRQVTLRFGVESEAA
CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHH
APILARLRELSDEMIETNPFQGANKTGQFVRILNLMREHIPEADSARAAFARFWTAEYLA
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
SADPADGIEFFQIRLRPLFETNYFRPIGESGNPVDFFPVLDFPFVLLFGLEFLLRTVAIS
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH
RRYTGVNWLDAMLWRWYDVLLLLPFWRWLRVIPVTIRLGQAQLLDLERVRAQVSQGFVTN
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHH
FAEDLTEVIVVRVINQIQVSIQRGSLPLLPAARTQRDYIDINNTNELEAIANLVFRIVLY
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHH
RVLPQVQPELQQLLRYNLDGLLKQLPAMQTLEQLPGLGSLPGQLTEHLANELTTTTYKTL
HHHHCCCHHHHHHHHHCHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
TGSFEDPVGSKLAAQLMQRFGEVLARELTQEHALEEIRSLLQDLLEEIKINYVERLSHED
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LEEVMEQTRQLRQKAQQLEKDRRR
HHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNAAQRILRRSVLRGRSRWLLLYEKGMALLALSNLCLVLFDMSYVPGRDFWLQGRVQIFG
CCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCEEEEE
AFGPPIPLPILSEETSRSPVTDLYDPIKGIEPNPETQRYLALVDELRQVTLRFGVESEAA
CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHH
APILARLRELSDEMIETNPFQGANKTGQFVRILNLMREHIPEADSARAAFARFWTAEYLA
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
SADPADGIEFFQIRLRPLFETNYFRPIGESGNPVDFFPVLDFPFVLLFGLEFLLRTVAIS
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH
RRYTGVNWLDAMLWRWYDVLLLLPFWRWLRVIPVTIRLGQAQLLDLERVRAQVSQGFVTN
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHH
FAEDLTEVIVVRVINQIQVSIQRGSLPLLPAARTQRDYIDINNTNELEAIANLVFRIVLY
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHH
RVLPQVQPELQQLLRYNLDGLLKQLPAMQTLEQLPGLGSLPGQLTEHLANELTTTTYKTL
HHHHCCCHHHHHHHHHCHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
TGSFEDPVGSKLAAQLMQRFGEVLARELTQEHALEEIRSLLQDLLEEIKINYVERLSHED
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LEEVMEQTRQLRQKAQQLEKDRRR
HHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA