Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608361

Identifier: 86608361

GI number: 86608361

Start: 909072

End: 909683

Strand: Direct

Name: 86608361

Synonym: CYB_0882

Alternate gene names: NA

Gene position: 909072-909683 (Clockwise)

Preceding gene: 86608360

Following gene: 86608364

Centisome position: 29.84

GC content: 60.46

Gene sequence:

>612_bases
ATGGATGCAACTTTGGAATCTTTCTTTGCCTCTGCCACCCAAATTGGGCTAGGTCTAGCAGGCTTGCTGGCTGTGCTCAC
CCTGCTGGCCTGGATTCGCAATTGGCCCTTGAAGTTTGCGCTGGTGGGCTACACGGCGTTTGCGCTGGTTTTAACAGCGG
GATGTTTTGCCCTCAGCTTGGGGCCGATCTTTCGCTCCCGCATTCCCGGTGCTGCCCCCTACACCACCGTCTATGACCAA
GGGGCGGATCGAGCGGTTATTGCTGTCAGCCCGGATATCACCCCGGAGCAACTGATCCTCACCCTGAAGCAGGCGGCCAG
CGATTTGGGATCCCCAGGACGCTTCTCCACCGGTTCGCCGGTGTTCACCTTGCGGGCCCGCACCGTCATCCATCCCGAGC
CGGGAGTTTCCGAGCCGTTGCTCTTGGGCACGCTGCAACAGCCGTTGGGAAAGCGCCTGCGCACCCCAGAAGAACAACAG
CAGCAGCAGATCCATCTAGAGGAAGAGGCCTTTGCCCGGCTGCGGAAGTTGGCCCAGGGTCAGGCTTCTGCCGCCTTGTC
TGCAGAGGAAGCGGAAGAGCCAACCACCGGGATCTCACTTGCCCAGTCTTGA

Upstream 100 bases:

>100_bases
GAGCAGGGTGCCAGCGGGACGGAGTCCTTAGATAGGGCAGCCAGAATCGGGCTCATCCTGCATCCTAGAGATGAAGCTCT
AGCCGCTAAACTGGGGAATC

Downstream 100 bases:

>100_bases
GCGCTGAGCCAGCGGCGCAGATCCTGTCCCACCCGGTCGGGGATCTCCCAGGGAAAGAGATGAGCCACGTTGGGATAGAC
AATGCAGGTGCAGTGGGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MDATLESFFASATQIGLGLAGLLAVLTLLAWIRNWPLKFALVGYTAFALVLTAGCFALSLGPIFRSRIPGAAPYTTVYDQ
GADRAVIAVSPDITPEQLILTLKQAASDLGSPGRFSTGSPVFTLRARTVIHPEPGVSEPLLLGTLQQPLGKRLRTPEEQQ
QQQIHLEEEAFARLRKLAQGQASAALSAEEAEEPTTGISLAQS

Sequences:

>Translated_203_residues
MDATLESFFASATQIGLGLAGLLAVLTLLAWIRNWPLKFALVGYTAFALVLTAGCFALSLGPIFRSRIPGAAPYTTVYDQ
GADRAVIAVSPDITPEQLILTLKQAASDLGSPGRFSTGSPVFTLRARTVIHPEPGVSEPLLLGTLQQPLGKRLRTPEEQQ
QQQIHLEEEAFARLRKLAQGQASAALSAEEAEEPTTGISLAQS
>Mature_203_residues
MDATLESFFASATQIGLGLAGLLAVLTLLAWIRNWPLKFALVGYTAFALVLTAGCFALSLGPIFRSRIPGAAPYTTVYDQ
GADRAVIAVSPDITPEQLILTLKQAASDLGSPGRFSTGSPVFTLRARTVIHPEPGVSEPLLLGTLQQPLGKRLRTPEEQQ
QQQIHLEEEAFARLRKLAQGQASAALSAEEAEEPTTGISLAQS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ycf51 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019664 [H]

Pfam domain/function: PF10726 DUF2518 [H]

EC number: NA

Molecular weight: Translated: 21624; Mature: 21624

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDATLESFFASATQIGLGLAGLLAVLTLLAWIRNWPLKFALVGYTAFALVLTAGCFALSL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
GPIFRSRIPGAAPYTTVYDQGADRAVIAVSPDITPEQLILTLKQAASDLGSPGRFSTGSP
HHHHHHHCCCCCCCHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
VFTLRARTVIHPEPGVSEPLLLGTLQQPLGKRLRTPEEQQQQQIHLEEEAFARLRKLAQG
EEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCC
QASAALSAEEAEEPTTGISLAQS
HHHHHHCHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MDATLESFFASATQIGLGLAGLLAVLTLLAWIRNWPLKFALVGYTAFALVLTAGCFALSL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
GPIFRSRIPGAAPYTTVYDQGADRAVIAVSPDITPEQLILTLKQAASDLGSPGRFSTGSP
HHHHHHHCCCCCCCHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
VFTLRARTVIHPEPGVSEPLLLGTLQQPLGKRLRTPEEQQQQQIHLEEEAFARLRKLAQG
EEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCC
QASAALSAEEAEEPTTGISLAQS
HHHHHHCHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]