Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
---|---|
Accession | NC_007776 |
Length | 3,046,682 |
Click here to switch to the map view.
The map label for this gene is 86608361
Identifier: 86608361
GI number: 86608361
Start: 909072
End: 909683
Strand: Direct
Name: 86608361
Synonym: CYB_0882
Alternate gene names: NA
Gene position: 909072-909683 (Clockwise)
Preceding gene: 86608360
Following gene: 86608364
Centisome position: 29.84
GC content: 60.46
Gene sequence:
>612_bases ATGGATGCAACTTTGGAATCTTTCTTTGCCTCTGCCACCCAAATTGGGCTAGGTCTAGCAGGCTTGCTGGCTGTGCTCAC CCTGCTGGCCTGGATTCGCAATTGGCCCTTGAAGTTTGCGCTGGTGGGCTACACGGCGTTTGCGCTGGTTTTAACAGCGG GATGTTTTGCCCTCAGCTTGGGGCCGATCTTTCGCTCCCGCATTCCCGGTGCTGCCCCCTACACCACCGTCTATGACCAA GGGGCGGATCGAGCGGTTATTGCTGTCAGCCCGGATATCACCCCGGAGCAACTGATCCTCACCCTGAAGCAGGCGGCCAG CGATTTGGGATCCCCAGGACGCTTCTCCACCGGTTCGCCGGTGTTCACCTTGCGGGCCCGCACCGTCATCCATCCCGAGC CGGGAGTTTCCGAGCCGTTGCTCTTGGGCACGCTGCAACAGCCGTTGGGAAAGCGCCTGCGCACCCCAGAAGAACAACAG CAGCAGCAGATCCATCTAGAGGAAGAGGCCTTTGCCCGGCTGCGGAAGTTGGCCCAGGGTCAGGCTTCTGCCGCCTTGTC TGCAGAGGAAGCGGAAGAGCCAACCACCGGGATCTCACTTGCCCAGTCTTGA
Upstream 100 bases:
>100_bases GAGCAGGGTGCCAGCGGGACGGAGTCCTTAGATAGGGCAGCCAGAATCGGGCTCATCCTGCATCCTAGAGATGAAGCTCT AGCCGCTAAACTGGGGAATC
Downstream 100 bases:
>100_bases GCGCTGAGCCAGCGGCGCAGATCCTGTCCCACCCGGTCGGGGATCTCCCAGGGAAAGAGATGAGCCACGTTGGGATAGAC AATGCAGGTGCAGTGGGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MDATLESFFASATQIGLGLAGLLAVLTLLAWIRNWPLKFALVGYTAFALVLTAGCFALSLGPIFRSRIPGAAPYTTVYDQ GADRAVIAVSPDITPEQLILTLKQAASDLGSPGRFSTGSPVFTLRARTVIHPEPGVSEPLLLGTLQQPLGKRLRTPEEQQ QQQIHLEEEAFARLRKLAQGQASAALSAEEAEEPTTGISLAQS
Sequences:
>Translated_203_residues MDATLESFFASATQIGLGLAGLLAVLTLLAWIRNWPLKFALVGYTAFALVLTAGCFALSLGPIFRSRIPGAAPYTTVYDQ GADRAVIAVSPDITPEQLILTLKQAASDLGSPGRFSTGSPVFTLRARTVIHPEPGVSEPLLLGTLQQPLGKRLRTPEEQQ QQQIHLEEEAFARLRKLAQGQASAALSAEEAEEPTTGISLAQS >Mature_203_residues MDATLESFFASATQIGLGLAGLLAVLTLLAWIRNWPLKFALVGYTAFALVLTAGCFALSLGPIFRSRIPGAAPYTTVYDQ GADRAVIAVSPDITPEQLILTLKQAASDLGSPGRFSTGSPVFTLRARTVIHPEPGVSEPLLLGTLQQPLGKRLRTPEEQQ QQQIHLEEEAFARLRKLAQGQASAALSAEEAEEPTTGISLAQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ycf51 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019664 [H]
Pfam domain/function: PF10726 DUF2518 [H]
EC number: NA
Molecular weight: Translated: 21624; Mature: 21624
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDATLESFFASATQIGLGLAGLLAVLTLLAWIRNWPLKFALVGYTAFALVLTAGCFALSL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH GPIFRSRIPGAAPYTTVYDQGADRAVIAVSPDITPEQLILTLKQAASDLGSPGRFSTGSP HHHHHHHCCCCCCCHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC VFTLRARTVIHPEPGVSEPLLLGTLQQPLGKRLRTPEEQQQQQIHLEEEAFARLRKLAQG EEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCC QASAALSAEEAEEPTTGISLAQS HHHHHHCHHHHCCCCCCCCCCCC >Mature Secondary Structure MDATLESFFASATQIGLGLAGLLAVLTLLAWIRNWPLKFALVGYTAFALVLTAGCFALSL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH GPIFRSRIPGAAPYTTVYDQGADRAVIAVSPDITPEQLILTLKQAASDLGSPGRFSTGSP HHHHHHHCCCCCCCHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC VFTLRARTVIHPEPGVSEPLLLGTLQQPLGKRLRTPEEQQQQQIHLEEEAFARLRKLAQG EEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCC QASAALSAEEAEEPTTGISLAQS HHHHHHCHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]