Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608349

Identifier: 86608349

GI number: 86608349

Start: 898964

End: 900535

Strand: Direct

Name: 86608349

Synonym: CYB_0868

Alternate gene names: NA

Gene position: 898964-900535 (Clockwise)

Preceding gene: 86608347

Following gene: 86608354

Centisome position: 29.51

GC content: 59.16

Gene sequence:

>1572_bases
ATGCTTGGCCAAGTATCCAAATCTGGTTGGGGGATCTGTTCAGCCTTGCTGCCTCTGTTGGCGGGGGTTGCCCTCGGCTG
TGGGGGTGGCGGCGGCAGTTCTCCACCTCTTCCTCCGCCAGGTGGCGGGCCCATCATCCTGAGAGTGGATCCGGCCAGTG
GCCCCTTTACCAAACTGGCAGACGCAGTTGCAGAGGCGCAGCGACTTCAGACTGCCACAGCCGGCCTGGAGGTGCTGATC
GAGATTTTGGGGACGGGCAGGGAAACTTTGCAAAGCAACCTGGCCCTGGATGGCGGCGATGGCACCAACGGCGGTCGCAT
TCGCATCACCAGCTCCACCGCCTATGAGATCCTGACCGGGCTCTTTGACGTGATTGTAGCCAGCCAAACCAGCCTGCAGG
GGGTAGATGTGGTGCTGGGGGGTGGACGGGTGCAGGTGAACAACGGCACTTTTCAGCCGCGCAAGGTCACCCTCAACGAC
CCTCGCTCCAACATCTTGGTCAACGGCAATGCTGCGGTTCTAGAGGGAGCCTTGAACCAATTGGCCGAGATTTTGTGCCA
GCAATTTTTGGATCCCTGTGTGCAGATCTCTGGGAATGGCCGGGTCAGCCGTGTCTCGCCGATTGTCAGTAAAACGGGTG
GGGTGGGCATAGGCACTGTGCCGGGCAGCAGTCCCATCCTTGAAAACAACACAATTCTCCTGCAGGCTTTGGGGGCTTTG
GCCGTTCGCTATGGTGACAACTCCGGCGGGATCTTCCGCAACAACCAAATCGAAGGGGATCCACCCACGGCTGGAGCCGG
CTTGGTACTGCAGGCGCGGCAAGCAGGTACGAGTGGCACTACCGGGATTCAGCTGGATGGGGCAGGCTCAATTCCATCCA
TTCAATCCAACCGGATCGGCGTGGGCAGGATAGCCGGCAGTGTCGGCATTCGTATTTTGCAGGGAACCCAGGCCCGCACC
ATTTCCGGGAATACGTTCCTAGCTCGGGGCGAGGGCGTAGGAGTGGCAATTCAGGCGGCCCCCGGCACCCCAGATGCGGT
AGTCGCAGCCTACCTGGCTGGCAATACTTTCCAAGGAAACTTTGCTCAGAGGGTCACTGGGGAACCTGCGCCCATCCCAG
CTCCTGCACCGACGCCGACGGAAACGCCCACGCCAACTCCTGCACCGACACCCTCTCCCACCCCCACACCTCCAGTATTG
GGCACCGGCCCCATTCAAGTTACCTTGAGTTGGAACACCATCGATGACCTTAACCTGTATGTTACGGATCCCACGAAGCA
GACCGTGTTTTTTAACAACCGAATTGTCCCTTCTGGAGGACGGCTGGATGTGGATGCCAATGCCGACTGTGTTGCCGTAA
CCCAAAATGCTGTGGAGAATGTCTTTTGGGCTTCCACCCCGCCCTCAGGGCCATACTTCATCGAGGTGAGATTGTTCCGG
CGCTGCTCCCAATCAACTGCTCCCATTCCCTTTACCGTAACGGTTCGCAAGAGCGGAAACGTCGCGCAGACTTTTAGCGG
CTTGGCCACATCCCCTGGCTTGGCGGGTAGGTTTACGTTTTCCTTCCCCTGA

Upstream 100 bases:

>100_bases
CTTGGCCATCTGTACCTTGACCCCGTGGCAGTTGTTTGTTGCTCTTGTTTGTTGCTGTAACAACCTTAACCGCTAAGCGC
TTGTAAGGGGCTTTCCACCT

Downstream 100 bases:

>100_bases
AGTTAGCCAAGGCTGGCAGCCATCTGCCCTGCCCACGTATGGCCATTTTGGTTCAGACTAGGACACCACACCTATACTCA
TACTCAGATCTTTGATTGCA

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 523; Mature: 523

Protein sequence:

>523_residues
MLGQVSKSGWGICSALLPLLAGVALGCGGGGGSSPPLPPPGGGPIILRVDPASGPFTKLADAVAEAQRLQTATAGLEVLI
EILGTGRETLQSNLALDGGDGTNGGRIRITSSTAYEILTGLFDVIVASQTSLQGVDVVLGGGRVQVNNGTFQPRKVTLND
PRSNILVNGNAAVLEGALNQLAEILCQQFLDPCVQISGNGRVSRVSPIVSKTGGVGIGTVPGSSPILENNTILLQALGAL
AVRYGDNSGGIFRNNQIEGDPPTAGAGLVLQARQAGTSGTTGIQLDGAGSIPSIQSNRIGVGRIAGSVGIRILQGTQART
ISGNTFLARGEGVGVAIQAAPGTPDAVVAAYLAGNTFQGNFAQRVTGEPAPIPAPAPTPTETPTPTPAPTPSPTPTPPVL
GTGPIQVTLSWNTIDDLNLYVTDPTKQTVFFNNRIVPSGGRLDVDANADCVAVTQNAVENVFWASTPPSGPYFIEVRLFR
RCSQSTAPIPFTVTVRKSGNVAQTFSGLATSPGLAGRFTFSFP

Sequences:

>Translated_523_residues
MLGQVSKSGWGICSALLPLLAGVALGCGGGGGSSPPLPPPGGGPIILRVDPASGPFTKLADAVAEAQRLQTATAGLEVLI
EILGTGRETLQSNLALDGGDGTNGGRIRITSSTAYEILTGLFDVIVASQTSLQGVDVVLGGGRVQVNNGTFQPRKVTLND
PRSNILVNGNAAVLEGALNQLAEILCQQFLDPCVQISGNGRVSRVSPIVSKTGGVGIGTVPGSSPILENNTILLQALGAL
AVRYGDNSGGIFRNNQIEGDPPTAGAGLVLQARQAGTSGTTGIQLDGAGSIPSIQSNRIGVGRIAGSVGIRILQGTQART
ISGNTFLARGEGVGVAIQAAPGTPDAVVAAYLAGNTFQGNFAQRVTGEPAPIPAPAPTPTETPTPTPAPTPSPTPTPPVL
GTGPIQVTLSWNTIDDLNLYVTDPTKQTVFFNNRIVPSGGRLDVDANADCVAVTQNAVENVFWASTPPSGPYFIEVRLFR
RCSQSTAPIPFTVTVRKSGNVAQTFSGLATSPGLAGRFTFSFP
>Mature_523_residues
MLGQVSKSGWGICSALLPLLAGVALGCGGGGGSSPPLPPPGGGPIILRVDPASGPFTKLADAVAEAQRLQTATAGLEVLI
EILGTGRETLQSNLALDGGDGTNGGRIRITSSTAYEILTGLFDVIVASQTSLQGVDVVLGGGRVQVNNGTFQPRKVTLND
PRSNILVNGNAAVLEGALNQLAEILCQQFLDPCVQISGNGRVSRVSPIVSKTGGVGIGTVPGSSPILENNTILLQALGAL
AVRYGDNSGGIFRNNQIEGDPPTAGAGLVLQARQAGTSGTTGIQLDGAGSIPSIQSNRIGVGRIAGSVGIRILQGTQART
ISGNTFLARGEGVGVAIQAAPGTPDAVVAAYLAGNTFQGNFAQRVTGEPAPIPAPAPTPTETPTPTPAPTPSPTPTPPVL
GTGPIQVTLSWNTIDDLNLYVTDPTKQTVFFNNRIVPSGGRLDVDANADCVAVTQNAVENVFWASTPPSGPYFIEVRLFR
RCSQSTAPIPFTVTVRKSGNVAQTFSGLATSPGLAGRFTFSFP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53262; Mature: 53262

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGQVSKSGWGICSALLPLLAGVALGCGGGGGSSPPLPPPGGGPIILRVDPASGPFTKLA
CCCCCCCCCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHH
DAVAEAQRLQTATAGLEVLIEILGTGRETLQSNLALDGGDGTNGGRIRITSSTAYEILTG
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEEECCCCCCCCEEEEECCHHHHHHHH
LFDVIVASQTSLQGVDVVLGGGRVQVNNGTFQPRKVTLNDPRSNILVNGNAAVLEGALNQ
HHHHHHHCCCCCCCEEEEEECCEEEECCCCCCCEEEEECCCCCCEEECCCHHHHHHHHHH
LAEILCQQFLDPCVQISGNGRVSRVSPIVSKTGGVGIGTVPGSSPILENNTILLQALGAL
HHHHHHHHHHHHHEEECCCCCEEEECHHHHCCCCCEEECCCCCCCEECCCEEEEEECCEE
AVRYGDNSGGIFRNNQIEGDPPTAGAGLVLQARQAGTSGTTGIQLDGAGSIPSIQSNRIG
EEEECCCCCCEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCC
VGRIAGSVGIRILQGTQARTISGNTFLARGEGVGVAIQAAPGTPDAVVAAYLAGNTFQGN
HHEEHHCCCEEEEECCCEEEECCCEEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCC
FAQRVTGEPAPIPAPAPTPTETPTPTPAPTPSPTPTPPVLGTGPIQVTLSWNTIDDLNLY
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEE
VTDPTKQTVFFNNRIVPSGGRLDVDANADCVAVTQNAVENVFWASTPPSGPYFIEVRLFR
EECCCCEEEEECCEECCCCCEEEECCCCCEEEEEHHHHHHEEECCCCCCCCEEEEEHHHH
RCSQSTAPIPFTVTVRKSGNVAQTFSGLATSPGLAGRFTFSFP
HHCCCCCCCEEEEEEECCCCHHHHHHCCCCCCCCCEEEEEECC
>Mature Secondary Structure
MLGQVSKSGWGICSALLPLLAGVALGCGGGGGSSPPLPPPGGGPIILRVDPASGPFTKLA
CCCCCCCCCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHH
DAVAEAQRLQTATAGLEVLIEILGTGRETLQSNLALDGGDGTNGGRIRITSSTAYEILTG
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEEECCCCCCCCEEEEECCHHHHHHHH
LFDVIVASQTSLQGVDVVLGGGRVQVNNGTFQPRKVTLNDPRSNILVNGNAAVLEGALNQ
HHHHHHHCCCCCCCEEEEEECCEEEECCCCCCCEEEEECCCCCCEEECCCHHHHHHHHHH
LAEILCQQFLDPCVQISGNGRVSRVSPIVSKTGGVGIGTVPGSSPILENNTILLQALGAL
HHHHHHHHHHHHHEEECCCCCEEEECHHHHCCCCCEEECCCCCCCEECCCEEEEEECCEE
AVRYGDNSGGIFRNNQIEGDPPTAGAGLVLQARQAGTSGTTGIQLDGAGSIPSIQSNRIG
EEEECCCCCCEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCC
VGRIAGSVGIRILQGTQARTISGNTFLARGEGVGVAIQAAPGTPDAVVAAYLAGNTFQGN
HHEEHHCCCEEEEECCCEEEECCCEEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCC
FAQRVTGEPAPIPAPAPTPTETPTPTPAPTPSPTPTPPVLGTGPIQVTLSWNTIDDLNLY
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEE
VTDPTKQTVFFNNRIVPSGGRLDVDANADCVAVTQNAVENVFWASTPPSGPYFIEVRLFR
EECCCCEEEEECCEECCCCCEEEECCCCCEEEEEHHHHHHEEECCCCCCCCEEEEEHHHH
RCSQSTAPIPFTVTVRKSGNVAQTFSGLATSPGLAGRFTFSFP
HHCCCCCCCEEEEEEECCCCHHHHHHCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA