Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
---|---|
Accession | NC_007776 |
Length | 3,046,682 |
Click here to switch to the map view.
The map label for this gene is 86608347
Identifier: 86608347
GI number: 86608347
Start: 898249
End: 898362
Strand: Direct
Name: 86608347
Synonym: CYB_0865
Alternate gene names: NA
Gene position: 898249-898362 (Clockwise)
Preceding gene: 86608344
Following gene: 86608349
Centisome position: 29.48
GC content: 59.65
Gene sequence:
>114_bases ATGGCTGTGCAACGCTTTTTGATCGACACGGATACGGCGGGAGATGATGTTACCTCGCTGCTCTTTGGGCTGCTCTGGCC CAACAGCATCCTACAGGGCTGCCCGCCGGGGTGA
Upstream 100 bases:
>100_bases AGCCTACACGGATCCCCTCTCAAGATACACCGGCTCAATGGCTGCCCTGAGACTGCCTGCAAGGGTTAAGATGACACCCT GATTTGGGCTTAGCCTGGGT
Downstream 100 bases:
>100_bases GTTTCATTCGAGATCCCTTTGCGGAAGTGCCCAAACCCGCCGATTATGCCAGCATCTGCAGCGGAGATACCCGTCCGCTG TTCTTTATCGGTGTGGATGC
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 37; Mature: 36
Protein sequence:
>37_residues MAVQRFLIDTDTAGDDVTSLLFGLLWPNSILQGCPPG
Sequences:
>Translated_37_residues MAVQRFLIDTDTAGDDVTSLLFGLLWPNSILQGCPPG >Mature_36_residues AVQRFLIDTDTAGDDVTSLLFGLLWPNSILQGCPPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3963; Mature: 3831
Theoretical pI: Translated: 3.66; Mature: 3.66
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVQRFLIDTDTAGDDVTSLLFGLLWPNSILQGCPPG CCCCCCEECCCCCCHHHHHHHHHHHCHHHHHCCCCCC >Mature Secondary Structure AVQRFLIDTDTAGDDVTSLLFGLLWPNSILQGCPPG CCCCCEECCCCCCHHHHHHHHHHHCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA