Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608333

Identifier: 86608333

GI number: 86608333

Start: 884301

End: 885257

Strand: Direct

Name: 86608333

Synonym: CYB_0851

Alternate gene names: NA

Gene position: 884301-885257 (Clockwise)

Preceding gene: 86608331

Following gene: 86608337

Centisome position: 29.03

GC content: 61.13

Gene sequence:

>957_bases
TTGCGAAACCTGTTTCTTACCGGCGCTAGCGGCTGCCTGGGGCACTATGTGTTGGAGCGCCTGGCCCAGCAAAGGGATCC
CGAGTTTCCGGAGCGGCCCGCCTACCACCTGTACGTTCTCATCCGCGAGACCAGCCGCCTACGGCTGCCCCTGGAACGGC
TGCCCGCCCCTATCACCCTAGTACCCGGCGATCTCCTGCGCATCCGGGAACAGGCTGCCCTGCTACGGCAGATGGACGGG
CTGATCCACATGGCGGCAGCTTGGGGGGATCCCGCCCTGGCTTGGGCCGTGAATGTTACCCACACCCTGGAGCTCTTTCA
GTTGTTGGATCCGGAGCGCTGTCAGCAGGTGATCTACTTTTCCACGGCCAGCCTTTTGAACCAGGACCTGGAGCCTTTGG
CCATTGCCGGACGGGCCGGCACCGACTACATCCGCAGCAAGTACGAGATGCTGCTGCGGCGGCAGGAAAGCGGCTTCTGG
CCGGAGCGCCTGCTCACCCTTTATCCCACCCTGCTCTTTGGCGGCAGCCCCCACCACCCCTACTCCCACATCACTGCCGG
CCTCAAGGACGTTCTCCGCTGGCTGGATCTGATCCGCTTTTTGCGGGTGGATGCCAGCTTCCACTTTATCCACGCTGCCG
ATGTGGCCGAGATGGTCGCCCACTGGGTGGCTCATCCCCCAGGCGCAGGAGATTGGGTGTTGGGCAACTCCCCCTTGTCT
TTGGATGAGTGCGTGGAACAGGTGTGTGCCTATTTCAAAAAGCGGATTTATTTCCGCGTGCCCCTGCCTTTGGCTTTGGT
TCGCGGCTTGGCCTTCTTGTTTCGGGTGCGGCTTTCCGAGTGGGATGAATATTGTCTGCGCCAGCGCCATTTTGTTTACC
CGGCCATTTCCCCAGAAACCCTGGGTTTGCGCTGCCGGTTTCCCACTTTGGCCTCTCTTTTGGATACCTACCTCTAG

Upstream 100 bases:

>100_bases
TCTTGCAGGGGAATTGAGGGTTCAGGCAGTCCGGCAGACAGAAGCTGAAGCGGTACACTAGTCAGAAGCTTTTTTCATCG
AGTCCCGTTGGGAAGACCTC

Downstream 100 bases:

>100_bases
ACCACCTTTGAGTAACAGTAGAACTGGACGCTGCTTCCTTTCCCTCTGGGACGGGGGGATGAGAGCCGAGGACCCAAGGG
ATCCCACTCGCCTCCGACAG

Product: NAD-dependent epimerase/dehydratase family protein

Products: NA

Alternate protein names: Nucleoside-Diphosphate-Sugar Epimerase; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase; NmrA Family Protein; NAD Dependent Epimerase/Dehydratase Family; Nucleoside-Diphosphate-Sugar Epimerases

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MRNLFLTGASGCLGHYVLERLAQQRDPEFPERPAYHLYVLIRETSRLRLPLERLPAPITLVPGDLLRIREQAALLRQMDG
LIHMAAAWGDPALAWAVNVTHTLELFQLLDPERCQQVIYFSTASLLNQDLEPLAIAGRAGTDYIRSKYEMLLRRQESGFW
PERLLTLYPTLLFGGSPHHPYSHITAGLKDVLRWLDLIRFLRVDASFHFIHAADVAEMVAHWVAHPPGAGDWVLGNSPLS
LDECVEQVCAYFKKRIYFRVPLPLALVRGLAFLFRVRLSEWDEYCLRQRHFVYPAISPETLGLRCRFPTLASLLDTYL

Sequences:

>Translated_318_residues
MRNLFLTGASGCLGHYVLERLAQQRDPEFPERPAYHLYVLIRETSRLRLPLERLPAPITLVPGDLLRIREQAALLRQMDG
LIHMAAAWGDPALAWAVNVTHTLELFQLLDPERCQQVIYFSTASLLNQDLEPLAIAGRAGTDYIRSKYEMLLRRQESGFW
PERLLTLYPTLLFGGSPHHPYSHITAGLKDVLRWLDLIRFLRVDASFHFIHAADVAEMVAHWVAHPPGAGDWVLGNSPLS
LDECVEQVCAYFKKRIYFRVPLPLALVRGLAFLFRVRLSEWDEYCLRQRHFVYPAISPETLGLRCRFPTLASLLDTYL
>Mature_318_residues
MRNLFLTGASGCLGHYVLERLAQQRDPEFPERPAYHLYVLIRETSRLRLPLERLPAPITLVPGDLLRIREQAALLRQMDG
LIHMAAAWGDPALAWAVNVTHTLELFQLLDPERCQQVIYFSTASLLNQDLEPLAIAGRAGTDYIRSKYEMLLRRQESGFW
PERLLTLYPTLLFGGSPHHPYSHITAGLKDVLRWLDLIRFLRVDASFHFIHAADVAEMVAHWVAHPPGAGDWVLGNSPLS
LDECVEQVCAYFKKRIYFRVPLPLALVRGLAFLFRVRLSEWDEYCLRQRHFVYPAISPETLGLRCRFPTLASLLDTYL

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36484; Mature: 36484

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNLFLTGASGCLGHYVLERLAQQRDPEFPERPAYHLYVLIRETSRLRLPLERLPAPITL
CCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCHHHCCCCEEE
VPGDLLRIREQAALLRQMDGLIHMAAAWGDPALAWAVNVTHTLELFQLLDPERCQQVIYF
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHH
STASLLNQDLEPLAIAGRAGTDYIRSKYEMLLRRQESGFWPERLLTLYPTLLFGGSPHHP
HHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC
YSHITAGLKDVLRWLDLIRFLRVDASFHFIHAADVAEMVAHWVAHPPGAGDWVLGNSPLS
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHCCCCCCCCCEECCCCCC
LDECVEQVCAYFKKRIYFRVPLPLALVRGLAFLFRVRLSEWDEYCLRQRHFVYPAISPET
HHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCC
LGLRCRFPTLASLLDTYL
CCEEECCHHHHHHHHHCC
>Mature Secondary Structure
MRNLFLTGASGCLGHYVLERLAQQRDPEFPERPAYHLYVLIRETSRLRLPLERLPAPITL
CCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCHHHCCCCEEE
VPGDLLRIREQAALLRQMDGLIHMAAAWGDPALAWAVNVTHTLELFQLLDPERCQQVIYF
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHH
STASLLNQDLEPLAIAGRAGTDYIRSKYEMLLRRQESGFWPERLLTLYPTLLFGGSPHHP
HHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC
YSHITAGLKDVLRWLDLIRFLRVDASFHFIHAADVAEMVAHWVAHPPGAGDWVLGNSPLS
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHCCCCCCCCCEECCCCCC
LDECVEQVCAYFKKRIYFRVPLPLALVRGLAFLFRVRLSEWDEYCLRQRHFVYPAISPET
HHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCC
LGLRCRFPTLASLLDTYL
CCEEECCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA